prot_H-elongata_contig81304.15790.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81304.15790.1
Unique Nameprot_H-elongata_contig81304.15790.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length169
Homology
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BLAST of mRNA_H-elongata_contig81304.15790.1 vs. uniprot
Match: D8LGE4_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE4_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 2.370e-39
Identity = 80/165 (48.48%), Postives = 116/165 (70.30%), Query Frame = 0 
Query:    5 ADADCPDDRANGWKEDNDKAGTDLRWHDHVLRAETLLLTQQYKDSMERLEDRSDEEARGVLKGLVEEYRAVNESLAAFLARMSNANQGLVEMLQKSEDGRSALMMRRAAEMVVKALANAEEEVHSLKAELKEVGGQRDNYKTLLAKTNSEMELAQAYAQMGRATG 169
            AD D P  +     E   +  TDLRW  H L+   + L+ +++D+   LE + D EAR  +  L +E++ +N+ LAA LAR+S  N+ LVE+L+KSEDG++ALMMR+AAE++VK LANAEEEV SLKA+  E+  QRD+YK LLA+TNSE+++++A+AQ+  A G
Sbjct:    2 ADKDHPQGQTPAGGEGLVQESTDLRWEGHRLQGSHIELSLRFEDTTRTLESKGDREARAAMLRLAKEFKQLNDVLAAKLARISMINRTLVEILRKSEDGQAALMMRKAAELLVKGLANAEEEVFSLKAKAGELERQRDHYKALLARTNSELDVSRAHAQISEALG 166
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BLAST of mRNA_H-elongata_contig81304.15790.1 vs. uniprot
Match: A0A6H5KZE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE5_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 1.530e-37
Identity = 80/165 (48.48%), Postives = 117/165 (70.91%), Query Frame = 0 
Query:    5 ADADCPDDRANGWKEDNDKAGTDLRWHDHVLRAETLLLTQQYKDSMERLEDRSDEEARGVLKGLVEEYRAVNESLAAFLARMSNANQGLVEMLQKSEDGRSALMMRRAAEMVVKALANAEEEVHSLKAELKEVGGQRDNYKTLLAKTNSEMELAQAYAQMGRATG 169
            AD D P  + +   E   +  TDLRW  H L+   + L+ +++D+ + LE + D EAR  +  L +E++ +N+ LAA LAR+S  N+ LVE+L+KSEDG++ALMMR+AAE++VK LANAEEEV SLKA+  E+  QRD+YK LLA TNSE+++++A+AQ+  A G
Sbjct:    2 ADEDHPQGQTSAGGEGLVQESTDLRWEGHRLQGAHIELSLRFEDTTQTLESKGDREARAAMLRLAKEFKQLNDGLAAKLARISMINRTLVEILRKSEDGQAALMMRKAAELLVKGLANAEEEVFSLKAKAGELERQRDHYKALLATTNSELDISRAHAQISEALG 166
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81304.15790.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGE4_ECTSI2.370e-3948.48Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KZE5_9PHAE1.530e-3748.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 113..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81304contigH-elongata_contig81304:1111..1951 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81304.15790.1mRNA_H-elongata_contig81304.15790.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81304 1111..1951 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81304.15790.1 ID=prot_H-elongata_contig81304.15790.1|Name=mRNA_H-elongata_contig81304.15790.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=169bp
MLYQADADCPDDRANGWKEDNDKAGTDLRWHDHVLRAETLLLTQQYKDSM
ERLEDRSDEEARGVLKGLVEEYRAVNESLAAFLARMSNANQGLVEMLQKS
EDGRSALMMRRAAEMVVKALANAEEEVHSLKAELKEVGGQRDNYKTLLAK
TNSEMELAQAYAQMGRATG
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