mRNA_H-elongata_contig8124.15785.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8124.15785.1 vs. uniprot
Match: D7G4R3_ECTSI (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4R3_ECTSI) HSP 1 Score: 276 bits (707), Expect = 1.460e-93 Identity = 139/152 (91.45%), Postives = 147/152 (96.71%), Query Frame = 1
Query: 1 AGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDLNDESYEEENDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTSEDPAASMMRNVQGSMSVTPGTASRSAEAWSKEPACCGLCACFTGN 456
+GYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVD +DESYEE+NDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKT+EDP ASMMRN QGS+ VTPGTA+RSA+AWSKEPACCGLCACF+ N
Sbjct: 11 SGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTTEDPTASMMRNAQGSIPVTPGTATRSADAWSKEPACCGLCACFSAN 162
BLAST of mRNA_H-elongata_contig8124.15785.1 vs. uniprot
Match: A0A835ZL19_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL19_9STRA) HSP 1 Score: 169 bits (428), Expect = 3.180e-51 Identity = 89/152 (58.55%), Postives = 115/152 (75.66%), Query Frame = 1
Query: 1 AGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDLNDESYEEENDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTSEDPAASMMRNVQGSMSVTPGTASRSAEAWSKEPACCGLCACFTGN 456
+GYL KKAKTGKWQ+RWFETNAH+LTYYK++K+EKLLAALNLPQVGEIRL+D ++ +EEN+G+LF+IELN R+Y M+A++REEAARWVEVLK LQ ++ E+S+ E P A+M+R G + G W K+ C GLC CF +
Sbjct: 11 SGYLYKKAKTGKWQRRWFETNAHFLTYYKTRKVEKLLAALNLPQVGEIRLMD--EDPSDEENNGALFSIELNTRIYVMRAASREEAARWVEVLKALQALDAEDSRGHESPHAAMVRAPDG---IGSGEG-----YWKKDDKCFGLCGCFQAS 152
BLAST of mRNA_H-elongata_contig8124.15785.1 vs. uniprot
Match: A0A836CJC0_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJC0_9STRA) HSP 1 Score: 164 bits (415), Expect = 3.100e-49 Identity = 91/151 (60.26%), Postives = 115/151 (76.16%), Query Frame = 1
Query: 1 AGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDLNDESYEEENDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTS--EDPAASMMRNVQGSMSVTPGTASRSAEAWSKEPACCGLCACF 447
+GYL KKAKTGKWQ+RWFETNAH+LTYYK++K+EKLLAALNLPQVGEI+LVD + + EN+G+LFTIELN RVYTMKA TREEAARWVEVLK LQ M+ ++++ + E P AS++R +G+ + P + W K+ CCG CF
Sbjct: 12 SGYLHKKAKTGKWQRRWFETNAHFLTYYKTRKVEKLLAALNLPQVGEIKLVD--PDPNDPENNGALFTIELNTRVYTMKAGTREEAARWVEVLKALQAMDVDDARHAGAESPHASIVRTGEGTDAPGPDS------YWRKDSKCCG---CF 151
BLAST of mRNA_H-elongata_contig8124.15785.1 vs. uniprot
Match: A0A4D9CUK8_9STRA (PH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CUK8_9STRA) HSP 1 Score: 121 bits (304), Expect = 2.090e-32 Identity = 73/146 (50.00%), Postives = 92/146 (63.01%), Query Frame = 1
Query: 1 AGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDLNDESYEEENDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTSEDPAASMMRNVQGSMSVTPGTASRSAEAWSKEPACCGLC 438
+GYL KK + G+WQKRWFETN +LTYYKSKKM KLLAAL+L QVG I+L ++ E +EE+ GSLF+IELN+RVYT+KA EAA+WVEVL L+ + T V SM + G W K+ CCG+C
Sbjct: 18 SGYLHKKTRDGRWQKRWFETNGCFLTYYKSKKMTKLLAALDLVQVGTIKLTEV-PEPGDEEDLGSLFSIELNERVYTLKAGNDVEAAKWVEVLNQLKVGGSDVMPTCAG------NTVTSSMEIEAGGGETE---WKKKLQCCGIC 153
BLAST of mRNA_H-elongata_contig8124.15785.1 vs. uniprot
Match: A0A6U4KSE8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4KSE8_9STRA) HSP 1 Score: 120 bits (300), Expect = 9.420e-32 Identity = 69/126 (54.76%), Postives = 88/126 (69.84%), Query Frame = 1
Query: 4 GYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDLNDESYEEENDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEE-SKTSEDPAASMMRNVQGSMSVTP 378
GYL K+ K +WQKRWFETN +LTYYKS+KM+K+LAALNLPQVGEI+L L + + + +NDG+LFTIEL RVYT++A R+ AA+WVEVL L+T E S + AS + Q S TP
Sbjct: 27 GYLHKRTKDMRWQKRWFETNGCFLTYYKSRKMDKILAALNLPQVGEIKL--LPESAADPDNDGTLFTIELKARVYTLRAPNRKNAAKWVEVLNELKTSGNVEISSNDKARVASAPLDDQADWSKTP 150
BLAST of mRNA_H-elongata_contig8124.15785.1 vs. uniprot
Match: A0A7S2WTC5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTC5_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.580e-28 Identity = 59/95 (62.11%), Postives = 74/95 (77.89%), Query Frame = 1
Query: 4 GYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDLNDESYEEENDGSLFTIELNDRVYTMKASTREEAARWVEVLKVL 288
GYLQKK + G+WQKRWFETN +LTYYK+KKM KLLAALNLPQVGEI+L+D S + ++ G+LF+I LNDR Y +KA+ RE+A WV L +L
Sbjct: 48 GYLQKKTRDGRWQKRWFETNGCFLTYYKNKKMAKLLAALNLPQVGEIKLLDTG-HSDDVDSSGALFSIALNDREYMLKAAKREDAEVWVTKLNLL 141
BLAST of mRNA_H-elongata_contig8124.15785.1 vs. uniprot
Match: A0A7S2DE48_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DE48_9STRA) HSP 1 Score: 108 bits (270), Expect = 4.760e-27 Identity = 58/116 (50.00%), Postives = 83/116 (71.55%), Query Frame = 1
Query: 4 GYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDLNDESYEEENDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESK------TSEDPA 333
GYLQKK K GKWQKRWFETN +LTYYK++KM+KLLAA+ LP+VGEI L+D + ++ + G LF+I+LN R Y +KA + EA WV++L L+ E ++++ ++EDP+
Sbjct: 16 GYLQKKTKQGKWQKRWFETNGIFLTYYKNQKMKKLLAAVKLPEVGEISLIDPHPDNDDTVEPG-LFSIQLNSREYILKAESHPEAVEWVKILTKLKESESKDTRMHSTGSSAEDPS 130
BLAST of mRNA_H-elongata_contig8124.15785.1 vs. uniprot
Match: A0A1W0A4A7_9STRA (PH domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4A7_9STRA) HSP 1 Score: 107 bits (268), Expect = 6.880e-27 Identity = 61/93 (65.59%), Postives = 70/93 (75.27%), Query Frame = 1
Query: 4 GYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDLNDESYEEENDG-SLFTIELNDRVYTMKASTREEAARWVEVL 279
GYL KK + GKWQKRWFETN +LTYYK K+ +KLLAALNLPQVGEI L+ N E DG LFTIELNDR+YT+KA +E+AA WVE L
Sbjct: 8 GYLLKKTRNGKWQKRWFETNRCFLTYYK-KQGQKLLAALNLPQVGEITLLPENTE------DGPGLFTIELNDRIYTIKAKNQEDAALWVEAL 93
BLAST of mRNA_H-elongata_contig8124.15785.1 vs. uniprot
Match: A0A7S2G8J6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8J6_9STRA) HSP 1 Score: 108 bits (269), Expect = 8.310e-27 Identity = 54/92 (58.70%), Postives = 73/92 (79.35%), Query Frame = 1
Query: 4 GYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDLNDESYEEENDGSLFTIELNDRVYTMKASTREEAARWVEVL 279
GYLQKK K+G+WQ+RWFETN +LTYYK+KKM KLLAA+NLPQVG+I +++ + E+ ++ DG F+I+LN R Y +KA+ EEA WV+VL
Sbjct: 32 GYLQKKTKSGQWQRRWFETNGVFLTYYKNKKMSKLLAAVNLPQVGDIAVMEPDAEN-DDTVDGGCFSIQLNSREYILKAADHEEALAWVKVL 122
BLAST of mRNA_H-elongata_contig8124.15785.1 vs. uniprot
Match: A0A482RVG4_9ARCH (PH domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVG4_9ARCH) HSP 1 Score: 105 bits (262), Expect = 1.400e-26 Identity = 55/96 (57.29%), Postives = 72/96 (75.00%), Query Frame = 1
Query: 1 AGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDLNDESYEEENDGSLFTIELNDRVYTMKASTREEAARWVEVLKVL 288
+GYL K+ + G+WQKRWFETN YLTYYKS+KMEKLLAAL+LPQVGEI++V ++ ++E LF+IELN RVY ++A + EA +WV L L
Sbjct: 10 SGYLYKRTRDGRWQKRWFETNGVYLTYYKSRKMEKLLAALSLPQVGEIKVVLPEQDAEKQEG---LFSIELNTRVYILRAKSSAEADQWVSTLNKL 102 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8124.15785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8124.15785.1 >prot_H-elongata_contig8124.15785.1 ID=prot_H-elongata_contig8124.15785.1|Name=mRNA_H-elongata_contig8124.15785.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=153bp AGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLback to top mRNA from alignment at H-elongata_contig8124:7766..9592- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8124.15785.1 ID=mRNA_H-elongata_contig8124.15785.1|Name=mRNA_H-elongata_contig8124.15785.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1827bp|location=Sequence derived from alignment at H-elongata_contig8124:7766..9592- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8124:7766..9592- >mRNA_H-elongata_contig8124.15785.1 ID=mRNA_H-elongata_contig8124.15785.1|Name=mRNA_H-elongata_contig8124.15785.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=918bp|location=Sequence derived from alignment at H-elongata_contig8124:7766..9592- (Himanthalia elongata Himel1 dioecious)back to top |