mRNA_H-elongata_contig80752.15728.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig80752.15728.1 vs. uniprot
Match: D8LJT3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT3_ECTSI) HSP 1 Score: 181 bits (458), Expect = 1.620e-51 Identity = 100/167 (59.88%), Postives = 120/167 (71.86%), Query Frame = 1
Query: 1 DPECTFKPKITARSANLQGRSVVELSRGDQLKKETTLRLAKLRTEQVGLLGLEVLADTTFRPRINEDSPLQTAVSKLKITSDPDGYIAKVEVGSARRNRWGAYTTLVRPAGAMDKAAKELRGCTFRPEITVCPDYITRIAQSISASKSSTAKRHGR-----VKPDWR 486
DP+CTFKP+ITARSA LQ RSVVELSRGDQLK+ETT RL++LR EQ E+LADTTFRPRIN D+ + AVSKLK+ SDPD YIA VE R+ ++V+ GA+++AAKE+ GCTF+PE T CP YITRIAQSI ASK+ G+ KPDWR
Sbjct: 364 DPDCTFKPQITARSATLQARSVVELSRGDQLKRETTQRLSRLRAEQ------ELLADTTFRPRINADAASRMAVSKLKVVSDPDNYIATVETLRRRKEE-----SVVK--GAIERAAKEVEGCTFKPETTECPAYITRIAQSICASKALPGPGGGKKQVKNAKPDWR 517
BLAST of mRNA_H-elongata_contig80752.15728.1 vs. uniprot
Match: A0A835ZG99_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG99_9STRA) HSP 1 Score: 122 bits (306), Expect = 3.210e-29 Identity = 69/163 (42.33%), Postives = 99/163 (60.74%), Query Frame = 1
Query: 10 CTFKPKITARSANLQGRSVVELSRGDQLKKETTLRLAKLRTEQVGLLGLEVLADTTFRPRINEDSPLQTAVSKLKITSDPDGYIAKVEVGSARRNRWGAYTTLVRPAGAMDKAAKELRGCTFRPEITVCPDYITRIAQSISASKSSTAKRHGRVK----PDWR 486
CTF P+ITARS GRSV+E+SRGDQL++ET +RL++LR E+ E L D TF P++N+ + S L++ SDP+ YIA+V+ AR+ R T R A +AA E CTF+P+ CP Y+ RIA S++ ++++ A R + PDWR
Sbjct: 886 CTFAPQITARSRRRSGRSVLEMSRGDQLRRETNVRLSRLRMER------EQLGDVTFEPQLNDGPASRGVKSHLQVVSDPESYIARVQ---ARQRRRDERTLNARVA----RAAAEAADCTFQPQTAECPAYVRRIAASMAEARAAAAAEAARPRSPPRPDWR 1035
BLAST of mRNA_H-elongata_contig80752.15728.1 vs. uniprot
Match: A0A812V4V6_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812V4V6_9DINO) HSP 1 Score: 105 bits (263), Expect = 1.870e-23 Identity = 63/163 (38.65%), Postives = 90/163 (55.21%), Query Frame = 1
Query: 1 DPECTFKPKITARSANLQGRSVVELSRGDQLKKETTLRLAKLRTEQVGLLGLEVLADTTFRPRINEDSPLQTAVSKLKITSDPDGYIAKVEVGSARRNRWGAYTTLVRPAGAMDKAAKELRGCTFRPEITVCPDYITRIAQSISASKS-STAKRHGRVKPDWR 486
DPECTF P+I S R+ E+S GD LKKE TLR+ +LR+EQ L G+ TF+P IN +S A +L+I DPD Y+A+V+ +A ++ A M+ + EL CTF+P + P ++ RIAQS++ +K+ KPDWR
Sbjct: 659 DPECTFAPRINPSSRKRPARTASEMSVGDALKKEATLRMMRLRSEQESLDGV------TFKPAINPNSA--AAQGRLRIQDDPDSYVARVQEAAALSSQRAALAK-------METSRSELADCTFKPVVHDAPMFVKRIAQSMALTKAVRPPPPEESKKPDWR 806
BLAST of mRNA_H-elongata_contig80752.15728.1 vs. uniprot
Match: A0A7S2WD98_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WD98_9STRA) HSP 1 Score: 104 bits (260), Expect = 4.680e-23 Identity = 63/166 (37.95%), Postives = 92/166 (55.42%), Query Frame = 1
Query: 1 DPECTFKPKITARSANLQGRSVVELSRGDQLKKETTLRLAKLRTEQVGLLGLEVLADTTFRPRINEDSPLQTAVSKLKITSDPDGYIAKVEVGSARRNRWGAYTTLVRPAGAMDKAAKELRGCTFRPEITVCPDYITRIAQSISASKSS----TAKRHGRVKPDWR 486
DPECTF+PKIT + GRS VE+SRGD L+KET R+ KL+ EQ E + TF P +N + +LKI S+P+ YI +++ + ++ TL A + KEL CTF+PEI P Y+ RI +S++ +K + A + + KP+WR
Sbjct: 604 DPECTFQPKITKSAKKRPGRSAVEMSRGDSLRKETNARMMKLKVEQ------EEHQELTFTPEVNTTH--KNTEGRLKILSEPETYIRRLQHKTTLQSH---RQTLA----AQENEMKELGECTFKPEIHDAPKYVKRIVRSLALAKPAREMQAAAKRRQEKPEWR 754
BLAST of mRNA_H-elongata_contig80752.15728.1 vs. uniprot
Match: A0A0P1AJ15_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJ15_PLAHL) HSP 1 Score: 104 bits (259), Expect = 6.450e-23 Identity = 61/166 (36.75%), Postives = 90/166 (54.22%), Query Frame = 1
Query: 1 DPECTFKPKITARSANLQGRSVVELSRGDQLKKETTLRLAKLRTEQVGLLGLEVLADTTFRPRINEDSPLQTAVSKLKITSDPDGYIAKVEVGSARRNRWGAYTTLVRPAGAMDKAAKELRGCTFRPEITVCPDYITRIAQSISASKSSTAKRHG----RVKPDWR 486
DP CTFKP I S + RS++ELSRGD L++ET RL KL+ EQ E +A TFRP++N S + +LKITS P+ Y+ +V+ + R+ + + K E CTF+P P Y+ RIA+S+S +K+ A+ + KP+W+
Sbjct: 666 DPNCTFKPAINQASIKRKPRSIIELSRGDLLRRETAQRLMKLKMEQ------EEMASLTFRPQLNRTS--ERYEGRLKITSSPETYLQRVKEQTQERS-------IKQRRAIQQKEIGEFNECTFKPRTIEAPAYVQRIARSVSLTKAFRAQHEALARAKEKPEWK 816
BLAST of mRNA_H-elongata_contig80752.15728.1 vs. uniprot
Match: F0W9C0_9STRA (Uncharacterized protein AlNc14C39G3387 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W9C0_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.410e-21 Identity = 61/147 (41.50%), Postives = 84/147 (57.14%), Query Frame = 1
Query: 1 DPECTFKPKITARSANLQGRSVVELSRGDQLKKETTLRLAKLRTEQVGLLGLEVLADTTFRPRINEDSPLQTAVSKLKITSDPDGYIAKVEVGSARRNRWGAYTTLVRPAGAMDKAAKELRGCTFRPEITVCPDYITRIAQSISASK 441
DP CTF+PKI +SA + RS++ELSRGD L++ETT RL K++ EQ + +A TF P +N S A SKLKI P+ Y+ +V + + T R A A++K +EL CTFRP P Y+ IA+S+S K
Sbjct: 631 DPHCTFQPKINQKSARRKARSIMELSRGDLLRRETTKRLVKIQVEQ------DEMARLTFHPHLNRVS--NKAHSKLKIMKSPETYLQRV------KQQMDFRETRQRNA-AVEKETEELSKCTFRPSTIEAPAYVHHIARSVSLRK 762
BLAST of mRNA_H-elongata_contig80752.15728.1 vs. uniprot
Match: A0A024GCF1_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GCF1_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 3.120e-20 Identity = 59/149 (39.60%), Postives = 82/149 (55.03%), Query Frame = 1
Query: 1 DPECTFKPKITARSANLQGRSVVELSRGDQLKKETTLRLAKLRTEQVGLLGLEVLADTTFRPRINEDSPLQTAVSKLKITSDPDGYIAKV--EVGSARRNRWGAYTTLVRPAGAMDKAAKELRGCTFRPEITVCPDYITRIAQSISASK 441
DP CTF+PKI SA + RS++ELSRGD L++ET RL K++ EQ + +A TF P++N S A SKLKI P+ Y+ +V ++ + + A A +K AKEL CTF P P Y+ IA+S+S K
Sbjct: 639 DPHCTFRPKINQTSARRKARSIMELSRGDLLRRETAKRLVKIQMEQ------DEMARLTFHPQLNPVS--DKAHSKLKILKSPETYLQRVRQQIDIREKKQRNA---------AKEKEAKELTKCTFHPSTIQAPAYVHHIAKSVSIRK 770
BLAST of mRNA_H-elongata_contig80752.15728.1 vs. uniprot
Match: A0A7S3F1B9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F1B9_9EUKA) HSP 1 Score: 79.7 bits (195), Expect = 4.100e-15 Identity = 57/160 (35.62%), Postives = 83/160 (51.88%), Query Frame = 1
Query: 7 ECTFKPKITARSANLQGRSVVELSRGDQLKKETTLRLAKLRTEQVGLLGLEVLADTTFRPRINEDSPLQTAVSKLKITSDPDGYIAKVEVGSARRNRWGAYTTLVRPAGAMDKAAKELRGCTFRPEITVCPDYITRIAQSISASKSSTAKRHGRVKPDWR 486
ECTF P+I+A + + RSV EL D + E L + +Q G + L TF+P IN + S+LK++S+PD Y+A+V A ++R T VR A + K + CTF P+ P Y+TRIA+S+ +KS+ KPDWR
Sbjct: 103 ECTFHPRISADARTRRPRSVDELH-DDAQRSERMKELRRSAAKQEGEMNL------TFKPAINSVPGVN---SRLKVSSEPDSYLARVRQHMALKDR---VTECVRQA----EEQKAMEECTFHPQTHEAPAYVTRIARSMKLAKSALPPPPP-SKPDWR 244
BLAST of mRNA_H-elongata_contig80752.15728.1 vs. uniprot
Match: L1J6C0_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J6C0_GUITC) HSP 1 Score: 74.7 bits (182), Expect = 1.220e-12 Identity = 56/165 (33.94%), Postives = 82/165 (49.70%), Query Frame = 1
Query: 1 DPECTFKPKITARSANLQGRSVVELSRGDQLKKETTLRLAKLRTEQVGLLGLEVLADTTFRPRINEDSPLQTAVSKLKITSDPDGYIAKVEVGSARRNRWGAYTTLVRPAGAMDKAAKELRGCTFRPEITVCPDYITRIAQSISASKSSTAKRHG----RVKPDW 483
D E +FKPKI S L+GRS E+S GD + ++ +L R + L T++P++N ++ S+LKI+SDP Y+A+VE R + + T A + KEL CTF+P I P+++ RIAQ+ K A R V PDW
Sbjct: 312 DGEHSFKPKINRASRELRGRSWHEMSYGD-MTRQGEAQLTVKRDVEYRNTSLY-----TYKPQLNAVPGVE---SRLKISSDPHNYLARVEHEQRRAQQEQSRT-------AQELREKELEECTFQPLIHEAPEFVKRIAQTHKRKKMVEAMRKQASIENVHPDW 460
BLAST of mRNA_H-elongata_contig80752.15728.1 vs. uniprot
Match: A0A7S4L9L3_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L9L3_GUITH) HSP 1 Score: 74.7 bits (182), Expect = 1.350e-12 Identity = 56/165 (33.94%), Postives = 82/165 (49.70%), Query Frame = 1
Query: 1 DPECTFKPKITARSANLQGRSVVELSRGDQLKKETTLRLAKLRTEQVGLLGLEVLADTTFRPRINEDSPLQTAVSKLKITSDPDGYIAKVEVGSARRNRWGAYTTLVRPAGAMDKAAKELRGCTFRPEITVCPDYITRIAQSISASKSSTAKRHG----RVKPDW 483
D E +FKPKI S L+GRS E+S GD + ++ +L R + L T++P++N ++ S+LKI+SDP Y+A+VE R + + T A + KEL CTF+P I P+++ RIAQ+ K A R V PDW
Sbjct: 542 DGEHSFKPKINRASRELRGRSWHEMSYGD-MTRQGEAQLTVKRDVEYRNTSLY-----TYKPQLNAVPGVE---SRLKISSDPHNYLARVEHEQRRAQQEQSRT-------AQELREKELEECTFQPLIHEAPEFVKRIAQTHKRKKMVEAMRKQASIENVHPDW 690 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80752.15728.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig80752.15728.1 >prot_H-elongata_contig80752.15728.1 ID=prot_H-elongata_contig80752.15728.1|Name=mRNA_H-elongata_contig80752.15728.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=163bp DPECTFKPKITARSANLQGRSVVELSRGDQLKKETTLRLAKLRTEQVGLLback to top mRNA from alignment at H-elongata_contig80752:1554..2612- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig80752.15728.1 ID=mRNA_H-elongata_contig80752.15728.1|Name=mRNA_H-elongata_contig80752.15728.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1059bp|location=Sequence derived from alignment at H-elongata_contig80752:1554..2612- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig80752:1554..2612- >mRNA_H-elongata_contig80752.15728.1 ID=mRNA_H-elongata_contig80752.15728.1|Name=mRNA_H-elongata_contig80752.15728.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=978bp|location=Sequence derived from alignment at H-elongata_contig80752:1554..2612- (Himanthalia elongata Himel1 dioecious)back to top |