prot_H-elongata_contig80570.15707.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80570.15707.1
Unique Nameprot_H-elongata_contig80570.15707.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length272
Homology
BLAST of mRNA_H-elongata_contig80570.15707.1 vs. uniprot
Match: A0A6H5KD03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD03_9PHAE)

HSP 1 Score: 380 bits (976), Expect = 1.170e-120
Identity = 194/248 (78.23%), Postives = 218/248 (87.90%), Query Frame = 0
Query:    2 VCQLASEAGIGGHPSPIEMLKEATLAPLKYFQAQDRPDRGSKGKGQAFRQRLEAFQGCIEISASIFSAIRRCPQLARDRDVLPAVIAGCCSENPIAARHAFAILADQANQSPHVVSQMLLSKAMLIPTTVGMLQAPSRLGASGEEPNLAYTLACVYYLRAIKALAFSEVLDDTMRLDMYRTMVSSVPYARHRVALEAMQCLLDHPRAWELLVNAQRESRDADIFRRVVDRIKLCVEEATAPAAAAAAA 249
            +CQLAS +G+GG PSP+E+L+E TL PL+  QAQ+RP+RG K KG+A RQR EAF+  +++SA+IFSAIRRCP LARD+ +LP V+ GCCSEN +AARHAFAILAD A +SP VVSQ LLSKAML+PTTVGMLQAP  L ASG EPNLA +LACVYYLRAIKALAF+E LDDTMRLDMYRTMVSSV  ARHRVALEAMQCLLDHPRAWELLVNAQRESRDADIFRRVVDRIK+CVEEATAPA AAAAA
Sbjct:  217 LCQLASVSGVGGQPSPVEVLRETTLTPLRSLQAQERPERGGKTKGRALRQRQEAFEESLQVSAAIFSAIRRCPALARDQSILPPVLLGCCSENHLAARHAFAILADLAMKSPDVVSQTLLSKAMLVPTTVGMLQAPGGLAASGGEPNLADSLACVYYLRAIKALAFAEALDDTMRLDMYRTMVSSVSDARHRVALEAMQCLLDHPRAWELLVNAQRESRDADIFRRVVDRIKVCVEEATAPATAAAAA 464          
BLAST of mRNA_H-elongata_contig80570.15707.1 vs. uniprot
Match: D7FJG9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJG9_ECTSI)

HSP 1 Score: 375 bits (963), Expect = 1.050e-119
Identity = 191/248 (77.02%), Postives = 217/248 (87.50%), Query Frame = 0
Query:    2 VCQLASEAGIGGHPSPIEMLKEATLAPLKYFQAQDRPDRGSKGKGQAFRQRLEAFQGCIEISASIFSAIRRCPQLARDRDVLPAVIAGCCSENPIAARHAFAILADQANQSPHVVSQMLLSKAMLIPTTVGMLQAPSRLGASGEEPNLAYTLACVYYLRAIKALAFSEVLDDTMRLDMYRTMVSSVPYARHRVALEAMQCLLDHPRAWELLVNAQRESRDADIFRRVVDRIKLCVEEATAPAAAAAAA 249
            +CQLAS +G+GG PSP+E+L+E TL PL+  QAQ+RP+RG K KG+A RQR EAF+  +++SA+IFSAIRRCP LARD+ +LP V+ GCCSEN +AARHAFAILAD A +SP VVSQ LLSKAML+PTTVGMLQAP  L ++G EPNLA +LACVYYLRAIKALAF+  LDDTMRLDMYRTMVSSV  ARHRVALEAMQCLLDHPRAWELLVNAQRESRDADIFRRVVDRIK+CVEEATAPA AAAAA
Sbjct:  113 LCQLASVSGVGGQPSPVEVLRETTLTPLRSLQAQERPERGGKTKGRALRQRQEAFEESLQVSAAIFSAIRRCPALARDQSILPPVLLGCCSENHLAARHAFAILADLAMKSPDVVSQTLLSKAMLVPTTVGMLQAPGGLASAGGEPNLADSLACVYYLRAIKALAFAGALDDTMRLDMYRTMVSSVSDARHRVALEAMQCLLDHPRAWELLVNAQRESRDADIFRRVVDRIKVCVEEATAPATAAAAA 360          
BLAST of mRNA_H-elongata_contig80570.15707.1 vs. uniprot
Match: A0A835Z8W3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8W3_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.080e-27
Identity = 94/283 (33.22%), Postives = 122/283 (43.11%), Query Frame = 0
Query:   44 GKGQAFRQRLEAFQGCIEISASIFSAIRRCPQLARDRDVLPAVIAGCCSENPIAARHAFAILADQANQSPH-----------------------------VVSQMLLSKAML-----------------IPTTVGMLQAPSRLGASG-----EEPNLAYTLACVYYLRAIKALAFSEVLDDTMRLDMYRTMVSSVPYARHRVALEA------------------------------------MQCLLDHPRAWELLVNAQRESRDADIFRRVVDRIKLCVEEA 239
            G  +A R   E  +  + +S  + SA+RR   L R   +LP V+  C S N + ARHAFA+L +QA                                   VS +L                       +   V  L  P+ + A+G      +PNL   LACVYYLR +K L F+  L+   RLD YRT+ +SV   RHRVALEA                                    MQCL+DH RAW LLV+AQRESRDAD+FRRVVD ++ C+  A
Sbjct:  387 GGRKAHRGEAEVKEHLL-LSRVVLSAVRRSAALRRRASLLPRVLEACRSPNAVTARHAFAVLLEQAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSMVLAEXXXXXXXXXXXXXXXAMDPKAVAEGVYPLLQPTTVAAAGALEIHNQPNLEDPLACVYYLRVLKTLVFAPELEAQSRLDFYRTIANSVSDTRHRVALEASDVFNLNFNPVPHTVAGATAVGSLTAQSWNYRGTAAMQCLMDHERAWTLLVDAQRESRDADLFRRVVDALRRCLAAA 668          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80570.15707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KD03_9PHAE1.170e-12078.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJG9_ECTSI1.050e-11977.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z8W3_9STRA1.080e-2733.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80570contigH-elongata_contig80570:1996..2811 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80570.15707.1mRNA_H-elongata_contig80570.15707.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80570 298..2886 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80570.15707.1 ID=prot_H-elongata_contig80570.15707.1|Name=mRNA_H-elongata_contig80570.15707.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=272bp
MVCQLASEAGIGGHPSPIEMLKEATLAPLKYFQAQDRPDRGSKGKGQAFR
QRLEAFQGCIEISASIFSAIRRCPQLARDRDVLPAVIAGCCSENPIAARH
AFAILADQANQSPHVVSQMLLSKAMLIPTTVGMLQAPSRLGASGEEPNLA
YTLACVYYLRAIKALAFSEVLDDTMRLDMYRTMVSSVPYARHRVALEAMQ
CLLDHPRAWELLVNAQRESRDADIFRRVVDRIKLCVEEATAPAAAAAAAK
TTAGKSSVKIDQRVSRCLRLE*
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