prot_H-elongata_contig8053.15704.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8053.15704.1
Unique Nameprot_H-elongata_contig8053.15704.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length59
Homology
BLAST of mRNA_H-elongata_contig8053.15704.1 vs. uniprot
Match: D8LTW5_ECTSI (Bardet-Biedl syndrome 9, parathyroid hormone-responsive B1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTW5_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 7.330e-16
Identity = 40/58 (68.97%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    1 MTHLLRTSLAKVAKDYIPGSTFGQAPLTMPEDTNKLKKHISIVFDRLNKGARPTIKPN 58
            +THLLRTSLAKVAKD  P S     PL+MP DT KLKKH+SIVFDRLNKGAR  + P+
Sbjct:  976 VTHLLRTSLAKVAKDAAPPSAGQTPPLSMPADTVKLKKHLSIVFDRLNKGARLVVLPS 1033          
BLAST of mRNA_H-elongata_contig8053.15704.1 vs. uniprot
Match: A0A6H5K7J4_9PHAE (Fructose-bisphosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7J4_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 7.350e-16
Identity = 40/58 (68.97%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    1 MTHLLRTSLAKVAKDYIPGSTFGQAPLTMPEDTNKLKKHISIVFDRLNKGARPTIKPN 58
            +THLLRTSLAKVAKD  P S     PL+MP DT KLKKH+SIVFDRLNKGAR  + P+
Sbjct: 1052 VTHLLRTSLAKVAKDAAPPSAGQTPPLSMPADTVKLKKHLSIVFDRLNKGARLVVLPS 1109          
BLAST of mRNA_H-elongata_contig8053.15704.1 vs. uniprot
Match: A0A7S2FQC3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FQC3_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 5.900e-12
Identity = 35/58 (60.34%), Postives = 41/58 (70.69%), Query Frame = 0
Query:    1 MTHLLRTSLAKVAKDYIPGSTFGQAPLTMPEDTNKLKKHISIVFDRLNKGARPTIKPN 58
            +THLL+TSLAK AKD    S     PL MP+DT++LKKHI IV DRL KGA  T KP+
Sbjct:   80 LTHLLKTSLAKTAKD----SVIVHQPLVMPKDTSRLKKHIQIVCDRLKKGASLTGKPS 133          
BLAST of mRNA_H-elongata_contig8053.15704.1 vs. uniprot
Match: A0A8J1TWF3_OWEFU (Ofus.G061491 protein n=2 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TWF3_OWEFU)

HSP 1 Score: 67.0 bits (162), Expect = 1.590e-11
Identity = 32/52 (61.54%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    1 MTHLLRTSLAKVAKDYIPGSTFGQAPLTMPEDTNKLKKHISIVFDRLNKGAR 52
            +THLLRT LAK +KD     T   APLTMP+DT K+KKH++++FDRL KGAR
Sbjct:  778 ITHLLRTCLAKSSKD----QTINPAPLTMPKDTTKIKKHVALLFDRLGKGAR 825          
BLAST of mRNA_H-elongata_contig8053.15704.1 vs. uniprot
Match: A0A6J8B200_MYTCO (BBS9 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8B200_MYTCO)

HSP 1 Score: 62.0 bits (149), Expect = 9.190e-10
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    1 MTHLLRTSLAKVAKDYIPGSTFGQAPLTMPEDTNKLKKHISIVFDRLNKGAR 52
            +TH+LRT+LAK AKD     T    PL MPEDT K+KKH++++ D+L KGAR
Sbjct:  382 VTHVLRTTLAKAAKD----QTLNPQPLQMPEDTTKVKKHVALMIDKLGKGAR 429          
BLAST of mRNA_H-elongata_contig8053.15704.1 vs. uniprot
Match: A0A8B6H0Y5_MYTGA (Bardet-Biedl syndrome 9 protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6H0Y5_MYTGA)

HSP 1 Score: 62.0 bits (149), Expect = 9.260e-10
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    1 MTHLLRTSLAKVAKDYIPGSTFGQAPLTMPEDTNKLKKHISIVFDRLNKGAR 52
            +TH+LRT+LAK AKD     T    PL MPEDT K+KKH++++ D+L KGAR
Sbjct:  773 VTHVLRTTLAKAAKD----QTLNPQPLQMPEDTTKVKKHVALMIDKLGKGAR 820          
BLAST of mRNA_H-elongata_contig8053.15704.1 vs. uniprot
Match: A0A210QS47_MIZYE (Protein PTHB1 n=4 Tax=Pectinidae TaxID=6566 RepID=A0A210QS47_MIZYE)

HSP 1 Score: 62.0 bits (149), Expect = 9.270e-10
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    1 MTHLLRTSLAKVAKDYIPGSTFGQAPLTMPEDTNKLKKHISIVFDRLNKGAR 52
            +THLLRT+LAK AKD     T    PL MPEDT K+KKHI+++ D+L KGAR
Sbjct:  774 VTHLLRTTLAKSAKD----QTLNPQPLQMPEDTTKVKKHIALMCDKLGKGAR 821          
BLAST of mRNA_H-elongata_contig8053.15704.1 vs. uniprot
Match: UPI001B889D82 (protein PTHB1-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B889D82)

HSP 1 Score: 61.6 bits (148), Expect = 1.270e-9
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    1 MTHLLRTSLAKVAKDYIPGSTFGQAPLTMPEDTNKLKKHISIVFDRLNKGAR 52
            +TH+LRT+LAK AKD     +   +PLTMP DT K+KKHI+++ DRL KGAR
Sbjct:  771 VTHILRTTLAKSAKD----QSVNPSPLTMPSDTTKVKKHIALLCDRLGKGAR 818          
BLAST of mRNA_H-elongata_contig8053.15704.1 vs. uniprot
Match: UPI001EB013FC (protein PTHB1-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EB013FC)

HSP 1 Score: 61.6 bits (148), Expect = 1.270e-9
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    1 MTHLLRTSLAKVAKDYIPGSTFGQAPLTMPEDTNKLKKHISIVFDRLNKGAR 52
            +THLLRT+LAK AKD     T   +PLT+P+DT K+KKHI+++ DRL KG R
Sbjct:  771 VTHLLRTTLAKSAKD----QTVNPSPLTVPQDTTKVKKHIALLCDRLGKGVR 818          
BLAST of mRNA_H-elongata_contig8053.15704.1 vs. uniprot
Match: UPI001E1DB212 (protein PTHB1-like isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DB212)

HSP 1 Score: 61.6 bits (148), Expect = 1.270e-9
Identity = 30/52 (57.69%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    1 MTHLLRTSLAKVAKDYIPGSTFGQAPLTMPEDTNKLKKHISIVFDRLNKGAR 52
            +THLLRT+LAK AKD     T    PL +PEDT+K+KKHI+++ D+L+KGAR
Sbjct:  780 VTHLLRTTLAKSAKD----QTLNPQPLKLPEDTSKVKKHIALLCDKLSKGAR 827          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8053.15704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTW5_ECTSI7.330e-1668.97Bardet-Biedl syndrome 9, parathyroid hormone-respo... [more]
A0A6H5K7J4_9PHAE7.350e-1668.97Fructose-bisphosphatase n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2FQC3_9STRA5.900e-1260.34Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8J1TWF3_OWEFU1.590e-1161.54Ofus.G061491 protein n=2 Tax=Owenia fusiformis Tax... [more]
A0A6J8B200_MYTCO9.190e-1055.77BBS9 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0... [more]
A0A8B6H0Y5_MYTGA9.260e-1055.77Bardet-Biedl syndrome 9 protein n=1 Tax=Mytilus ga... [more]
A0A210QS47_MIZYE9.270e-1059.62Protein PTHB1 n=4 Tax=Pectinidae TaxID=6566 RepID=... [more]
UPI001B889D821.270e-957.69protein PTHB1-like n=1 Tax=Gigantopelta aegis TaxI... [more]
UPI001EB013FC1.270e-957.69protein PTHB1-like n=2 Tax=Haliotis TaxID=6452 Rep... [more]
UPI001E1DB2121.270e-957.69protein PTHB1-like isoform X1 n=2 Tax=Mercenaria m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028074PTHB1, C-terminal domainPFAMPF14728PHTB1_Ccoord: 1..47
e-value: 3.4E-9
score: 36.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8053contigH-elongata_contig8053:6099..6275 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8053.15704.1mRNA_H-elongata_contig8053.15704.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8053 6072..6275 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8053.15704.1 ID=prot_H-elongata_contig8053.15704.1|Name=mRNA_H-elongata_contig8053.15704.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp
MTHLLRTSLAKVAKDYIPGSTFGQAPLTMPEDTNKLKKHISIVFDRLNKG
ARPTIKPNI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028074PHTB1_C_dom