mRNA_H-elongata_contig80457.15696.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig80457.15696.1 vs. uniprot
Match: A0A6H5KHT0_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHT0_9PHAE) HSP 1 Score: 298 bits (764), Expect = 6.720e-94 Identity = 148/185 (80.00%), Postives = 164/185 (88.65%), Query Frame = 1
Query: 1 EAHDSEGRATDILKGLGFSATRMSQPTDELSGGWMTRLSLACALFCRPDLLLLDEPTNHMDLEGVVWLSNQLTDHIGDTMVLMVSHDAGFLDAVATDIIQFQLKQLAYFPGNYSAFLKTKSDHDTASNRTQETLDRQRKHLEDSVKKMTKAASGKSGDQKNYIAVASRMKKLGRHGHERDVNGHR 555
+AH++EGRAT ILKGLGFS +RMS PT ELSGGWMTR+SLACALFCRPDLLLLDEPTNH+DLEGV+WLS QLT+ IGDTMVLMVSHDA FLDAV TDII F+LKQL Y+ GNYSA++KTKSDHD A+NR Q+ LD+QRKH+EDSVKKMTKAASGK GDQK VASR KKLGRHG ERDVNGHR
Sbjct: 273 DAHEAEGRATSILKGLGFSESRMSCPTAELSGGWMTRVSLACALFCRPDLLLLDEPTNHLDLEGVLWLSKQLTEGIGDTMVLMVSHDAAFLDAVTTDIIHFRLKQLTYYAGNYSAYMKTKSDHDVAANRLQDNLDKQRKHIEDSVKKMTKAASGKGGDQKKSSQVASRNKKLGRHGLERDVNGHR 457
BLAST of mRNA_H-elongata_contig80457.15696.1 vs. uniprot
Match: A0A7S3DIW3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DIW3_9EUKA) HSP 1 Score: 172 bits (437), Expect = 5.460e-48 Identity = 93/183 (50.82%), Postives = 121/183 (66.12%), Query Frame = 1
Query: 1 EAHDSEGRATDILKGLGFSATRMSQPTDELSGGWMTRLSLACALFCRPDLLLLDEPTNHMDLEGVVWLSNQLTDHIGDTMVLMVSHDAGFLDAVATDIIQFQLKQLAYFPGNYSAFLKTKSDHDTASNRTQETLDRQRKHLEDSVKKMTKAASGKSGDQKNYIAVASRMKKLGRHGHERDVNG 549
+A +E RA IL GLGFSA + PT LSGGW R++LACALF +PD+LLLDEPTNH+D++ V+WL + L DT V++VSHDA FL+ V T+I+ F K+L Y+PGNY FL+T+ D NR Q LD++R H+ DS+KK+ A K GD K VASR KK G E+ V+G
Sbjct: 244 DAAGAEARAQAILTGLGFSAEMKNSPTSILSGGWRMRVALACALFVQPDVLLLDEPTNHLDIDAVLWLEDYLCSL--DTTVVVVSHDAAFLNEVCTEIVHFYHKRLDYYPGNYDDFLQTRHDKVAMMNRMQTNLDKKRNHILDSMKKIEADAKKKGGDDKKLGLVASRRKKAFYMGMEKTVDG 424
BLAST of mRNA_H-elongata_contig80457.15696.1 vs. uniprot
Match: A0A7S3DJH8_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DJH8_9EUKA) HSP 1 Score: 172 bits (437), Expect = 7.110e-47 Identity = 93/183 (50.82%), Postives = 121/183 (66.12%), Query Frame = 1
Query: 1 EAHDSEGRATDILKGLGFSATRMSQPTDELSGGWMTRLSLACALFCRPDLLLLDEPTNHMDLEGVVWLSNQLTDHIGDTMVLMVSHDAGFLDAVATDIIQFQLKQLAYFPGNYSAFLKTKSDHDTASNRTQETLDRQRKHLEDSVKKMTKAASGKSGDQKNYIAVASRMKKLGRHGHERDVNG 549
+A +E RA IL GLGFSA + PT LSGGW R++LACALF +PD+LLLDEPTNH+D++ V+WL + L DT V++VSHDA FL+ V T+I+ F K+L Y+PGNY FL+T+ D NR Q LD++R H+ DS+KK+ A K GD K VASR KK G E+ V+G
Sbjct: 297 DAAGAEARAQAILTGLGFSAEMKNSPTSILSGGWRMRVALACALFVQPDVLLLDEPTNHLDIDAVLWLEDYLCSL--DTTVVVVSHDAAFLNEVCTEIVHFYHKRLDYYPGNYDDFLQTRHDKVAMMNRMQTNLDKKRNHILDSMKKIEADAKKKGGDDKKLGLVASRRKKAFYMGMEKTVDG 477
BLAST of mRNA_H-elongata_contig80457.15696.1 vs. uniprot
Match: A0A7J7QIF6_9CHLO (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QIF6_9CHLO) HSP 1 Score: 164 bits (414), Expect = 1.310e-43 Identity = 90/184 (48.91%), Postives = 117/184 (63.59%), Query Frame = 1
Query: 1 EAHDSEGRATDILKGLGFSATRMSQPTDELSGGWMTRLSLACALFCRPDLLLLDEPTNHMDLEGVVWLSNQLTDHIGDTMVLMVSHDAGFLDAVATDIIQFQLKQLAYFPGNYSAFLKTKSDHDTASNRTQETLDRQRKHLEDSVKKMTKAASGKSGDQKNYIAVASRMKKLG-RHGHERDVNG 549
+A +EGRA IL GLGFS M PT LSGGW R+SLACALF PDLL LDEPTNH+DLE ++WL L +L+VSHD FL+AV + ++ + +QL YFPG Y A+++ K+ AS+R LD+QRKH+E S+ K A ++GD K + ASR KKL RHG +R+ G
Sbjct: 235 DADAAEGRARQILGGLGFSQDMMEGPTSSLSGGWRMRVSLACALFGAPDLLCLDEPTNHLDLEAIMWLQEYLARCCEGQTLLLVSHDRAFLNAVCQETVELKEQQLRYFPGPYDAYVEAKAAAALASSRQAAALDKQRKHIEASISAAEKQAR-QAGDDKKLLQAASRKKKLEERHGMDRNAAG 417
BLAST of mRNA_H-elongata_contig80457.15696.1 vs. uniprot
Match: A0A383VIM0_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VIM0_TETOB) HSP 1 Score: 162 bits (410), Expect = 4.840e-43 Identity = 90/186 (48.39%), Postives = 117/186 (62.90%), Query Frame = 1
Query: 1 EAHDSEGRATDILKGLGFSATRMSQPTDELSGGWMTRLSLACALFCRPDLLLLDEPTNHMDLEGVVWLSNQLTDHIGDTMVLMVSHDAGFLDAVATDIIQFQLKQLAYFPGNYSAFLKTKSDHDTASNRTQETLDRQRKHLEDSVKKMTKAASGKSGDQKNYIAVASRMKKLG-RHGHERDVNGHR 555
+A +EGRA IL GLGFS M PT LSGGW R+SLACALF PDLL LDEPTNH+DLE ++WL L +L+VSHD FL+AV + ++ + +QL YFPG Y +++ K+ AS+R LD+QRKH+E S+ K A ++GD K ASR KKL RHG +R+ GH+
Sbjct: 232 DADAAEGRARQILGGLGFSQALMDAPTASLSGGWRMRVSLACALFGAPDLLCLDEPTNHLDLEAILWLQEYLCRCCEGQTLLLVSHDRSFLNAVCQETVELKQQQLRYFPGPYDEYVEAKALAALASSRQAAALDKQRKHIEASISSAEKQAR-QAGDDKKLQQAASRKKKLEERHGMDRNAAGHK 416
BLAST of mRNA_H-elongata_contig80457.15696.1 vs. uniprot
Match: A0A0L0DLB5_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DLB5_THETB) HSP 1 Score: 156 bits (394), Expect = 9.170e-41 Identity = 89/185 (48.11%), Postives = 120/185 (64.86%), Query Frame = 1
Query: 1 EAHDSEGRATDILKGLGFSATRMSQPTDELSGGWMTRLSLACALFCRPDLLLLDEPTNHMDLEGVVWLSNQLTDHIGDTMVLMVSHDAGFLDAVATDIIQFQLKQLAYFPGNYSAFLKTKSDHDTASNRTQETLDRQRKHLEDSVKKMTKAASGKSGDQKNYIAVASRMKKLGRHGHERDVNGHR 555
EA +EGRAT IL+GL FS T M+ PT ELSGGW R++LA ALF +PDLL+LDEPTNH+DL ++WL L+ + G M+++VSHD FLDAVATDII F+ L Y+PGN+SA++ K+D D + ++R + S++ K + K GD K V SR +KL R G E+ +G R
Sbjct: 412 EADTAEGRATKILRGLNFSDTAMNAPTAELSGGWRMRVALARALFMKPDLLMLDEPTNHLDLRAILWLQAFLSRYEG--MLVVVSHDQAFLDAVATDIIVFRKLTLTYYPGNFSAYVAIKADLDAKAATLAANDAKKRAAIAKSIE-YNKTQARKKGDDKRLKQVTSRQRKLDRMGLEKLESGKR 593
BLAST of mRNA_H-elongata_contig80457.15696.1 vs. uniprot
Match: A0A8J9RN16_9CHLO (Probable ATP-binding cassette sub-family F member 3 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RN16_9CHLO) HSP 1 Score: 149 bits (377), Expect = 1.260e-38 Identity = 88/186 (47.31%), Postives = 119/186 (63.98%), Query Frame = 1
Query: 1 EAHDSEGRATDILKGLGFSATRMSQPTDELSGGWMTRLSLACALFCRPDLLLLDEPTNHMDLEGVVWLSNQLTDHIGDTMVLMVSHDAGFLDAVATDIIQFQLKQLAYFPGNYSAFLKTKSDHDTASNRTQETLDRQRKHLEDSVKKMTKAASGKSGDQKNYIAVASRMKKL-GRHGHERDVNGHR 555
+A +EGRA IL+GLGFS ++ LSGGW R +LA ALF PDLLLLDEPTN +DL ++WL + L + DT +++VSHD FLDAVAT+II F+ K+LAY GNY+ + + + R QE +DR++ H+E S+ +A + K+GD K VASR KKL R G E++ GHR
Sbjct: 240 DADAAEGRARKILRGLGFSTRQIDGSVALLSGGWRVRAALAQALFVEPDLLLLDEPTNALDLPTILWLQSYLKS-LEDTTIVVVSHDRAFLDAVATEIIVFRHKRLAYHAGNYTEYEQNAEEKQLHLARLQEGIDRKKAHIEKSILN-NEALAKKTGDDKKLQMVASRKKKLEDRMGMEKNDKGHR 423
BLAST of mRNA_H-elongata_contig80457.15696.1 vs. uniprot
Match: A0A061R7P7_9CHLO (Abc transporter n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R7P7_9CHLO) HSP 1 Score: 135 bits (339), Expect = 2.410e-33 Identity = 78/172 (45.35%), Postives = 112/172 (65.12%), Query Frame = 1
Query: 10 DSEGRATDILKGLGFSATRMS-QPTDELSGGWMTRLSLACALFCRPDLLLLDEPTNHMDLEGVVWLSNQLTDHIGD-TMVLMVSHDAGFLDAVATDIIQFQLKQLAYFPG-NYSAFLKTKSDHDTASNRTQETLDRQRKHLEDSVKKMTKAASGKSGDQKNYIAVASRMKKL 516
+++ RA+ IL GLGF+ S PT LSGGW R++LA ALF P LL+LDEPTNH+DL ++WL LT+ + T+VL+VSHD FLDAV TD ++ +++ YF G N+SA+ + + A+ R QE+LDR++K +E S++ M A +SGD K A+R +KL
Sbjct: 337 EAQARASGILTGLGFTEEMASGTPTARLSGGWRMRVALARALFVCPALLMLDEPTNHLDLPAILWLERWLTEEVDPGTIVLVVSHDRAFLDAVCTDTLRLVNRRIDYFLGMNFSAYAEATENLCAAAEREQESLDRRKKTMEKSIEAMASKAR-ESGDDKRLKQAAARRRKL 507
BLAST of mRNA_H-elongata_contig80457.15696.1 vs. uniprot
Match: A0A2I0S2H2_9PEZI (Putative ABC transporter ATP-binding protein C29A3.09c n=1 Tax=Cercospora zeina TaxID=348901 RepID=A0A2I0S2H2_9PEZI) HSP 1 Score: 135 bits (339), Expect = 2.660e-33 Identity = 73/172 (42.44%), Postives = 104/172 (60.47%), Query Frame = 1
Query: 1 EAHDSEGRATDILKGLGFSATRMSQPTDELSGGWMTRLSLACALFCRPDLLLLDEPTNHMDLEGVVWLSNQLTDHIGDTMVLMVSHDAGFLDAVATDIIQFQLKQLAYFPGNYSAFLKTKSDHDTASNRTQETLDRQRKHLEDSVKKMTKAASGKSGDQKNYIAVASRMKKL 516
+A +E +A +L GLGFSA + QP LSGGW +R SLACAL DLLLLDEPTN +DL ++WL + + DT V++V+HD F D VA +++ + +QL F GN S + + R +E D+Q+KH+ED+++ +AA ++GD K ASR KKL
Sbjct: 560 DADGAEAKARSVLLGLGFSAASIDQPRSNLSGGWQSRCSLACALCQSVDLLLLDEPTNFLDLPSIIWLERYIAEIADDTTVMVVTHDRAFGDEVAEELLVLRHQQLERFKGNLSNYEMQRLKTYKYMTRMKEAQDKQKKHIEDTIQNNIQAAK-RAGDDKKLKQAASRKKKL 730
BLAST of mRNA_H-elongata_contig80457.15696.1 vs. uniprot
Match: A0A2S6CAS0_9PEZI (Uncharacterized protein n=4 Tax=Cercospora TaxID=29002 RepID=A0A2S6CAS0_9PEZI) HSP 1 Score: 134 bits (337), Expect = 4.070e-33 Identity = 74/172 (43.02%), Postives = 103/172 (59.88%), Query Frame = 1
Query: 1 EAHDSEGRATDILKGLGFSATRMSQPTDELSGGWMTRLSLACALFCRPDLLLLDEPTNHMDLEGVVWLSNQLTDHIGDTMVLMVSHDAGFLDAVATDIIQFQLKQLAYFPGNYSAFLKTKSDHDTASNRTQETLDRQRKHLEDSVKKMTKAASGKSGDQKNYIAVASRMKKL 516
+A +E +A +L GLGFSA + QP LSGGW TR SLACAL DLLLLDEPTN +DL ++WL L + DT V++V+HD F D VA +++ + +QL F GN S + + R +E D+Q+KH+E +++ +AA ++GD K ASR KKL
Sbjct: 222 DADGAEAKARSVLLGLGFSAESIDQPRSNLSGGWQTRCSLACALCQSVDLLLLDEPTNFLDLPSIIWLERYLAEIADDTTVMVVTHDRAFGDEVAEELLVLRHQQLERFKGNLSNYEMQRLKTYKYMTRMKEAQDKQKKHIEGTIQNNIQAAK-RAGDDKKLKQAASRKKKL 392 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80457.15696.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig80457.15696.1 >prot_H-elongata_contig80457.15696.1 ID=prot_H-elongata_contig80457.15696.1|Name=mRNA_H-elongata_contig80457.15696.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=186bp EAHDSEGRATDILKGLGFSATRMSQPTDELSGGWMTRLSLACALFCRPDLback to top mRNA from alignment at H-elongata_contig80457:45..2782- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig80457.15696.1 ID=mRNA_H-elongata_contig80457.15696.1|Name=mRNA_H-elongata_contig80457.15696.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2738bp|location=Sequence derived from alignment at H-elongata_contig80457:45..2782- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig80457:45..2782- >mRNA_H-elongata_contig80457.15696.1 ID=mRNA_H-elongata_contig80457.15696.1|Name=mRNA_H-elongata_contig80457.15696.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1116bp|location=Sequence derived from alignment at H-elongata_contig80457:45..2782- (Himanthalia elongata Himel1 dioecious)back to top |