mRNA_H-elongata_contig8041.15693.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-elongata_contig8041.15693.1
Unique Name	mRNA_H-elongata_contig8041.15693.1
Type	mRNA
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)

Homology

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BLAST of mRNA_H-elongata_contig8041.15693.1 vs. uniprot
Match: D7G8Q2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Q2_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 3.280e-99
Identity = 154/180 (85.56%), Postives = 169/180 (93.89%), Query Frame = 2

Query:    2 EEDPRSPRAVVLVFHRMFERRMGAEPSGAMSPRSMKVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEMIACAAIYMASRSLGIKLPDNPPWWVLFNADLKVIGEICNTILALYLRPKISFLEPLCERSVFRKGGPLRKGAV 541
            EEDPR PRAVVLVFHRMFERR+G +P+  + P S++VLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNY+NDSLRTDLSLRFRSE+IACAAIYMASRSLGIKLPDNPPWWVLFNAD++ +GEICNTILALY RPK++FLEPLC+ SVFR+GGPLR  AV
Sbjct:  148 EEDPRQPRAVVLVFHRMFERRIGVDPAIVIPPESLRVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRPKVAFLEPLCDNSVFRRGGPLRIDAV 327

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BLAST of mRNA_H-elongata_contig8041.15693.1 vs. uniprot
Match: A0A835YUR3_9STRA (Cyclin-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUR3_9STRA)

HSP 1 Score: 208 bits (529), Expect = 4.700e-57
Identity = 104/175 (59.43%), Postives = 133/175 (76.00%), Query Frame = 2

Query:   23 RAVVLVFHRMFERRMGA-----EPSGAMSPRSMKVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEMIACAAIYMASRSLGIKLPDNPPWWVLFNADLKVIGEICNTILALYLRPKISFLEPLCERSVFRKGGPLRK 532
            R VV+VFHRM+ RR G      E  G +       L+ EM+RVE +VLK+LGFGFYNIMDHPHKFILYY+RVL  ++E   +QR W+Y+ND+LRTDL LR+R+E+IACAAIYMA+R+L ++LP +PPWW LFNA+L  IG+ICN ILALY +PK+ +LEPL   SVF  GG +R+
Sbjct:   99 RDVVMVFHRMYLRRRGLPLEFLELGGTVYAE----LKTEMIRVERYVLKDLGFGFYNIMDHPHKFILYYVRVLGWELEA--TQRVWSYLNDALRTDLCLRYRAEVIACAAIYMAARALRLRLPQSPPWWRLFNAELPEIGQICNAILALYKKPKVVWLEPLHSGSVFAPGGAVRR 267

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BLAST of mRNA_H-elongata_contig8041.15693.1 vs. uniprot
Match: A0A7S4D4U7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4U7_HETAK)

HSP 1 Score: 180 bits (457), Expect = 6.210e-47
Identity = 90/174 (51.72%), Postives = 123/174 (70.69%), Query Frame = 2

Query:    2 EEDPRSPRAVVLVFHRMFERRMGAEPSGAMSPRSMKVL--RDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEMIACAAIYMASRSLGIKLPDNPPWWVLFNADLKVIGEICNTILALYLRPKISFLEPLCERSVFRKG 517
            EE P+  R ++ VFH + + R G EP   +   +   +  + E++++E HVLKELGF FYNIMDHPHKFILYY++VL  D    ++QRAW+Y+NDSLRTDL LR  + +IACAAIYMA+R L + LP +PPWW LF+A L+ +  IC+ ILALY   K  ++EPL E +VF++G
Sbjct:  122 EEKPKRLREILFVFHHISQVRRG-EPITPLELGAQTYMQWKSELIKMERHVLKELGFSFYNIMDHPHKFILYYIKVL--DGSSALAQRAWSYVNDSLRTDLCLRHGAAVIACAAIYMAARVLRVPLPRSPPWWELFSAQLRDVAAICDAILALYEMEKTPWMEPLSEANVFKRG 292

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BLAST of mRNA_H-elongata_contig8041.15693.1 vs. uniprot
Match: W7U1X8_9STRA (Ania-6a type cyclin n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1X8_9STRA)

HSP 1 Score: 177 bits (450), Expect = 4.580e-44
Identity = 88/154 (57.14%), Postives = 114/154 (74.03%), Query Frame = 2

Query:    2 EEDPRSPRAVVLVFHRMFERRMGAEPSGAMSPRSMKV--LRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEMIACAAIYMASRSLGIKLPDNPPWWVLFNADLKVIGEICNTILALY 457
            EE PR+PR V+ VFH M  RR G  PS  +   S++   LR+ +L +E +VLKELGFGFY+IMDHPHKFILYY++ L  D    ++QRAWNY+NDSLR D  +RFR+E+IAC A+YMASR LG+KLPD+PPW+ LF A L+ +  + N IL+LY
Sbjct:  148 EEKPRAPRDVLFVFHHMCRRRRGLGPS-LLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTL--DGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLY 298

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BLAST of mRNA_H-elongata_contig8041.15693.1 vs. uniprot
Match: A0A803KPE9_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803KPE9_CHEQI)

HSP 1 Score: 153 bits (387), Expect = 2.500e-37
Identity = 80/170 (47.06%), Postives = 110/170 (64.71%), Query Frame = 2

Query:    2 EEDPRSPRAVVLVFHRMFERRMGAEPSGAMSPRSMKV--LRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEMIACAAIYMASRSLGIKLPDNPPWWVLFNADLKVIGEICNTILALYLRPKISFLEPLCERSV 505
            EE PR  R V++VFHRM  RR    P   +   S K   L+ +++R E H+LKE+GF  +  ++HPHKFI  YL VLEL    ++ Q AWN  NDSLRT L +RF+SE++AC  +Y A+R  G+ LP+NPPWW +F+AD   I E+C  +  LY RPK  ++ P+C+ SV
Sbjct:   99 EESPRKARQVLIVFHRMECRRENL-PVEHLDLYSKKYSELKMDLIRTERHLLKEMGFICH--VEHPHKFISNYLAVLELKEPSELRQDAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFGVPLPENPPWWKVFDADKAGIDEVCRVLAHLYSRPKAKYI-PVCKESV 264

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BLAST of mRNA_H-elongata_contig8041.15693.1 vs. uniprot
Match: UPI000B784CA6 (cyclin-L1-1-like isoform X1 n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B784CA6)

HSP 1 Score: 153 bits (387), Expect = 1.990e-36
Identity = 80/170 (47.06%), Postives = 110/170 (64.71%), Query Frame = 2

Query:    2 EEDPRSPRAVVLVFHRMFERRMGAEPSGAMSPRSMKV--LRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEMIACAAIYMASRSLGIKLPDNPPWWVLFNADLKVIGEICNTILALYLRPKISFLEPLCERSV 505
            EE PR  R V++VFHRM  RR    P   +   S K   L+ +++R E H+LKE+GF  +  ++HPHKFI  YL VLEL    ++ Q AWN  NDSLRT L +RF+SE++AC  +Y A+R  G+ LP+NPPWW +F+AD   I E+C  +  LY RPK  ++ P+C+ SV
Sbjct:   92 EESPRKARQVLIVFHRMECRRENL-PVEHLDLYSKKYSELKMDLIRTERHLLKEMGFICH--VEHPHKFISNYLAVLELKEPSELRQDAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFGVPLPENPPWWKVFDADKAGIDEVCRVLAHLYSRPKAKYI-PVCKESV 257

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BLAST of mRNA_H-elongata_contig8041.15693.1 vs. uniprot
Match: A0A0K9QFZ2_SPIOL (Uncharacterized protein n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QFZ2_SPIOL)

HSP 1 Score: 150 bits (380), Expect = 1.350e-35
Identity = 86/204 (42.16%), Postives = 124/204 (60.78%), Query Frame = 2

Query:    2 EEDPRSPRAVVLVFHRMFERR--MGAEPSGAMSPRSMKVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEMIACAAIYMASRSLGIKLPDNPPWWVLFNADLKVIGEICNTILALYLRPKISFLEPLCERSVF----RKGGPLRKGAVSKGTFGTLNTSAETVEGS 595
            EE PR  R V++VFHRM  RR  +  E     S +  + L+ +++R E H+LKE+GF  +  ++HPHKFI  YL VL++    ++ Q AWN  NDSLRT L +RF+SE++AC  +Y A+R  G+ LP+NPPWW +F+AD   I E+C  +  LY RPK  ++ P+C+ S       K    +  AV K   G+LNT   +V+ S
Sbjct:   92 EESPRKARQVLIVFHRMECRRENLPVEHLDLFSKKYSE-LKMDLIRTERHLLKEMGFICH--VEHPHKFISNYLAVLDVKENPELRQDAWNLANDSLRTTLCVRFKSEVVACGVVYAATRRFGVPLPENPPWWKVFDADKSGIDEVCRVLAHLYSRPKAQYI-PVCKESASFTSSNKSWDSQSTAVPK--EGSLNTPVASVDAS 289

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BLAST of mRNA_H-elongata_contig8041.15693.1 vs. uniprot
Match: A0A097PSL4_ASPOF (Arginine-rich cyclin 1 (Fragment) n=6 Tax=Petrosaviidae TaxID=1437197 RepID=A0A097PSL4_ASPOF)

HSP 1 Score: 140 bits (354), Expect = 5.450e-35
Identity = 74/167 (44.31%), Postives = 108/167 (64.67%), Query Frame = 2

Query:    2 EEDPRSPRAVVLVFHRMFERR--MGAEPSGAMSPRSMKVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEMIACAAIYMASRSLGIKLPDNPPWWVLFNADLKVIGEICNTILALYLRPKISFLEPLCE 496
            EE PR  + V++VFHRM  RR  +  E    +S R  + L+++++R E H+LKE+GF  +  ++HPHKFI  YL  L  D   ++ Q AWN  NDSLRT L +RF+SE++AC  IY A+R   I LP+NPPWW++F+AD   I E+C  +  +Y  PK  ++ P+C+
Sbjct:   16 EESPRKAKQVLVVFHRMECRRENLPVEHLDFLSKRYSE-LKNDLIRTERHLLKEMGFVCH--VEHPHKFISNYLATLGTD---ELRQEAWNLANDSLRTTLCVRFKSEVVACGVIYAAARRFQIPLPENPPWWLVFDADQNGIEEVCRVLAHVYTLPKAQYI-PVCK 175

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BLAST of mRNA_H-elongata_contig8041.15693.1 vs. uniprot
Match: F0YGC1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGC1_AURAN)

HSP 1 Score: 142 bits (359), Expect = 6.480e-35
Identity = 71/156 (45.51%), Postives = 106/156 (67.95%), Query Frame = 2

Query:    2 EEDPRSPRAVVLVFHRMFERRMGAEPSGAMSPRSMKVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEMIACAAIYMASRSLGIKLPDNP--PWWVLFNADLKVIGEICNTILALYLR 463
            EE P+  R  ++VFH ++  R  +  +  +        + E+++VE H+LKELGF FY I+DH HKFIL+Y+++L+ D  G+++Q AW+Y+ND LRTD +LR+RSE++ACAAIYMA+R L  KLPD+P  PWW +F      +  +   +LALY+R
Sbjct:   84 EEKPKRLRECLMVFHFVYRVRTKSSATLELGGVRYNGWKHELVKVERHILKELGFSFY-IIDHSHKFILFYVKLLDCD--GELAQEAWSYLNDCLRTDAALRYRSEVLACAAIYMAARRLQHKLPDDPAAPWWEVFRVGKADLDAVVAAVLALYVR 236

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BLAST of mRNA_H-elongata_contig8041.15693.1 vs. uniprot
Match: A0A803MST1_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MST1_CHEQI)

HSP 1 Score: 148 bits (373), Expect = 1.930e-34
Identity = 77/168 (45.83%), Postives = 108/168 (64.29%), Query Frame = 2

Query:    2 EEDPRSPRAVVLVFHRMFERRMGAEPSGAMSPRSMKVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEMIACAAIYMASRSLGIKLPDNPPWWVLFNADLKVIGEICNTILALYLRPKISFLEPLCERSV 505
            EE PR  R V++VFHRM  RR         SP+  + L+ +++R E H+LKE+GF  +  ++HPHKFI  YL V EL    ++ Q AWN  NDSLRT L +RF+SE++AC  +Y A+R  G+ LP+NPPWW +F+AD   I E+C  +  LY RPK  ++ P+ + SV
Sbjct:  273 EESPRKARQVLIVFHRMECRREN-------SPKYSE-LKMDLIRTERHLLKEMGFICH--VEHPHKFISNYLAVFELKELSELRQDAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFGVPLPENPPWWKVFDADKSGIDEVCRVLAHLYSRPKAKYI-PVRKESV 429

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig8041.15693.1 vs. uniprot

BLAST of mRNA_H-elongata_contig8041.15693.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G8Q2_ECTSI	3.280e-99	85.56	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YUR3_9STRA	4.700e-57	59.43	Cyclin-like protein (Fragment) n=1 Tax=Tribonema m...	[more]
A0A7S4D4U7_HETAK	6.210e-47	51.72	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
W7U1X8_9STRA	4.580e-44	57.14	Ania-6a type cyclin n=3 Tax=Monodopsidaceae TaxID=...	[more]
A0A803KPE9_CHEQI	2.500e-37	47.06	Uncharacterized protein n=1 Tax=Chenopodium quinoa...	[more]
UPI000B784CA6	1.990e-36	47.06	cyclin-L1-1-like isoform X1 n=3 Tax=Chenopodium qu...	[more]
A0A0K9QFZ2_SPIOL	1.350e-35	42.16	Uncharacterized protein n=2 Tax=Spinacia oleracea ...	[more]
A0A097PSL4_ASPOF	5.450e-35	44.31	Arginine-rich cyclin 1 (Fragment) n=6 Tax=Petrosav...	[more]
F0YGC1_AURAN	6.480e-35	45.51	Uncharacterized protein (Fragment) n=1 Tax=Aureoco...	[more]
A0A803MST1_CHEQI	1.930e-34	45.83	Uncharacterized protein n=1 Tax=Chenopodium quinoa...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig8041	contig	H-elongata_contig8041:2..2168 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	298.1
Seed ortholog evalue	6.5e-78
Seed eggNOG ortholog	2880.D7G8Q2
EggNOG free text desc.	positive regulation of phosphorylation of RNA polymerase II C-terminal domain
EggNOG OGs	COG5333@1,KOG0835@2759
COG Functional cat.	DKL
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Exons	1
Model size	2167
Cds size	1287
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig8041.15693.1	prot_H-elongata_contig8041.15693.1	Himanthalia elongata Himel1 dioecious	polypeptide	H-elongata_contig8041 51..1337 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622931209.9132855-UTR-H-elongata_contig8041:1..50	1622931209.9132855-UTR-H-elongata_contig8041:1..50	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig8041 2..50 +
1691679742.8101234-UTR-H-elongata_contig8041:1..50	1691679742.8101234-UTR-H-elongata_contig8041:1..50	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig8041 2..50 +
1622931209.9599478-UTR-H-elongata_contig8041:1337..2168	1622931209.9599478-UTR-H-elongata_contig8041:1337..2168	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig8041 1338..2168 +
1691679742.8300774-UTR-H-elongata_contig8041:1337..2168	1691679742.8300774-UTR-H-elongata_contig8041:1337..2168	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig8041 1338..2168 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622931209.9340203-CDS-H-elongata_contig8041:50..1337	1622931209.9340203-CDS-H-elongata_contig8041:50..1337	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig8041 51..1337 +
1691679742.8206232-CDS-H-elongata_contig8041:50..1337	1691679742.8206232-CDS-H-elongata_contig8041:50..1337	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig8041 51..1337 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-elongata_contig8041:2..2168+
coding sequence from alignment at H-elongata_contig8041:2..2168+

protein sequence of mRNA_H-elongata_contig8041.15693.1

>prot_H-elongata_contig8041.15693.1 ID=prot_H-elongata_contig8041.15693.1|Name=mRNA_H-elongata_contig8041.15693.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=429bp
MFERRMGAEPSGAMSPRSMKVLRDEMLRVELHVLKELGFGFYNIMDHPHK
FILYYLRVLELDIEGDVSQRAWNYINDSLRTDLSLRFRSEMIACAAIYMA
SRSLGIKLPDNPPWWVLFNADLKVIGEICNTILALYLRPKISFLEPLCER
SVFRKGGPLRKGAVSKGTFGTLNTSAETVEGSSASLALPGTDPSSTENEI
RRARDATEPTVEPAAEPPANSRAETPTEATSKTEPEAESAVADGDDGDDG
SGCTDSPGLAASSDVIAVGGGGGEDNEGGAGVTRTEAGQEQGSEIRSRSE
SQSRSRSGSKSHTSHSTSHSGPGLERDDRIEAEANGRSYEKEQYRDRERD
RKRPRESRRSRHDSRSRSRDRNSRRRDNKREDGHERVRDRERDRGRGREW
GKTRDRDRDRDRERRRDRGDRDNRKSRR*

mRNA from alignment at H-elongata_contig8041:2..2168+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-elongata_contig8041.15693.1 ID=mRNA_H-elongata_contig8041.15693.1|Name=mRNA_H-elongata_contig8041.15693.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2167bp|location=Sequence derived from alignment at H-elongata_contig8041:2..2168+ (Himanthalia elongata Himel1 dioecious)
TGAGGAGGATCCACGCTCACCTCGCGCTGTGGTACTGGTCTTTCACCGCA
TGTTCGAACGGCGGATGGGCGCGGAACCTTCAGGCGCAATGTCACCGCGA
TCGATGAAGGTCCTACGGGACGAAATGCTTCGCGTCGAGCTACATGTTTT
GAAGGAGCTTGGGTTCGGATTCTATAACATCATGGATCATCCCCACAAAT
TCATTCTCTACTACTTGAGAGTTTTGGAGCTAGACATTGAAGGAGACGTT
TCCCAACGGGCTTGGAACTACATCAATGACTCGCTACGTACAGACCTGTC
TCTCAGATTTCGCTCTGAGATGATCGCCTGTGCGGCGATCTATATGGCCT
CTCGCTCGCTTGGAATAAAACTTCCTGATAACCCTCCATGGTGGGTCCTC
TTCAACGCTGACTTAAAGGTAATTGGCGAAATATGCAACACCATTCTGGC
TCTTTACCTAAGACCGAAGATATCTTTCTTAGAGCCCCTGTGCGAGAGGA
GTGTCTTCAGAAAAGGGGGTCCTCTACGCAAAGGTGCAGTAAGTAAGGGT
ACATTTGGAACTCTAAATACTTCAGCCGAGACGGTAGAGGGATCTTCAGC
GAGTTTGGCTTTGCCAGGAACGGACCCATCGTCAACAGAAAACGAGATCC
GCCGGGCTCGAGACGCGACCGAACCTACAGTTGAACCTGCTGCCGAACCT
CCAGCCAACTCTAGAGCCGAAACACCAACTGAAGCAACATCTAAAACCGA
ACCTGAAGCCGAATCTGCAGTAGCTGATGGTGATGATGGTGATGATGGTA
GTGGTTGCACGGATAGTCCAGGGCTGGCGGCTTCTTCAGATGTAATTGCT
GTAGGTGGCGGCGGCGGTGAAGACAACGAAGGCGGCGCTGGCGTGACACG
TACGGAAGCAGGACAAGAACAGGGCAGTGAAATCCGAAGCAGGAGCGAGA
GCCAAAGCAGGAGTCGGAGCGGCAGCAAAAGCCACACGAGCCACAGTACA
AGCCACAGTGGTCCCGGCCTGGAACGAGATGACCGCATAGAAGCTGAAGC
AAATGGACGATCGTACGAAAAAGAACAGTATCGGGACCGAGAAAGGGATC
GGAAGCGTCCTAGAGAGAGCCGACGCAGTAGACATGACAGCCGCAGCAGG
AGCAGGGACAGGAACTCTAGGCGGAGGGATAACAAACGAGAAGATGGCCA
TGAACGAGTGAGAGATCGAGAGAGGGATAGAGGGCGGGGGAGGGAGTGGG
GAAAGACCAGAGATCGAGATCGAGACAGAGACAGAGAGAGACGTCGTGAT
CGCGGGGACAGAGACAACAGAAAGAGCCGGCGATAAGGGGCGCCTCGGCG
ACGGCCGTGCTCATGTGTTCAAAACAAAAGCGGCTGGGACTGAGGATGGT
AGCGCCACGTTGAAGCATGAGACCAAAGATTACCATGCCCTACTCCAGCA
TATATAGAGGTTGGCTATCAAACCGCTCGGTATCAAAATGTGTGTTTGCC
GCTTTCGATAATACGCTTTCGAGGAGGCGCGAAGTTTTCGGCTGGCAAAC
CCACCGGAATCAACACGCCGAAGTTTCAGTTTCTCGTCAGACGTGTATAC
GAGGGCATGTGTGGAGGAGAGCCTGATAGGAACCTGACTCATGAAACAAT
TTTTACGCTCAACCACGGTACCGCCCCGCCAAACGAAGTGCTAAAAAATG
TAATAGTGTTGCCACCCCCTCGTCCAATCGCCGTCTAGAGAATAGCTTGG
GGGAGTTTCCTGAGATATCTATCATTTTTTTACATCCAGTGTGTACTATT
GATTGTGTAGCTCATGTTGTTCTGCAAGTAAATGTCATGTGTTTCCGCCC
CCCTCGACAAATTGGCTTCTATAGAACAGCGTCGAAGAGTTTTCCCCAAA
TGTTCTTACTTCTCACCCAGCGCGAACCACTGGTTGTTTGGCTGATTTGT
TTCTACACATAAAAGTTGATGCCAAAGCGCGGGTATATTTTACAAATACT
CAAGCTACGCGTCAAAGTACCTTAACGGAAGATCCTAACGTGTTTTGCGG
CAAAGATGAGCCTCGATATTTCCTTTTCCGAATTTGGATTTTTGTAATGT
CCGAAGTGTTGAATAGCGATTCAAAAACCTCAGGGGTGTTTACGGAGTAG
AACTGCTCCGCGGAGCG

Coding sequence (CDS) from alignment at H-elongata_contig8041:2..2168+

>mRNA_H-elongata_contig8041.15693.1 ID=mRNA_H-elongata_contig8041.15693.1|Name=mRNA_H-elongata_contig8041.15693.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2574bp|location=Sequence derived from alignment at H-elongata_contig8041:2..2168+ (Himanthalia elongata Himel1 dioecious)
ATGTTCGAACGGCGGATGGGCGCGGAACCTTCAGGCGCAATGTCACCGCG
ATCGATGAAGGTCCTACGGGACGAAATGCTTCGCGTCGAGCTACATGTTT
TGAAGGAGCTTGGGTTCGGATTCTATAACATCATGGATCATCCCCACAAA
TTCATTCTCTACTACTTGAGAGTTTTGGAGCTAGACATTGAAGGAGACGT
TTCCCAACGGGCTTGGAACTACATCAATGACTCGCTACGTACAGACCTGT
CTCTCAGATTTCGCTCTGAGATGATCGCCTGTGCGGCGATCTATATGGCC
TCTCGCTCGCTTGGAATAAAACTTCCTGATAACCCTCCATGGTGGGTCCT
CTTCAACGCTGACTTAAAGGTAATTGGCGAAATATGCAACACCATTCTGG
CTCTTTACCTAAGACCGAAGATATCTTTCTTAGAGCCCCTGTGCGAGAGG
AGTGTCTTCAGAAAAGGGGGTCCTCTACGCAAAGGTGCAGTAAGTAAGGG
TACATTTGGAACTCTAAATACTTCAGCCGAGACGGTAGAGGGATCTTCAG
CGAGTTTGGCTTTGCCAGGAACGGACCCATCGTCAACAGAAAACGAGATC
CGCCGGGCTCGAGACGCGACCGAACCTACAGTTGAACCTGCTGCCGAACC
TCCAGCCAACTCTAGAGCCGAAACACCAACTGAAGCAACATCTAAAACCG
AACCTGAAGCCGAATCTGCAGTAGCTGATGGTGATGATGGTGATGATGGT
AGTGGTTGCACGGATAGTCCAGGGCTGGCGGCTTCTTCAGATGTAATTGC
TGTAGGTGGCGGCGGCGGTGAAGACAACGAAGGCGGCGCTGGCGTGACAC
GTACGGAAGCAGGACAAGAACAGGGCAGTGAAATCCGAAGCAGGAGCGAG
AGCCAAAGCAGGAGTCGGAGCGGCAGCAAAAGCCACACGAGCCACAGTAC
AAGCCACAGTGGTCCCGGCCTGGAACGAGATGACCGCATAGAAGCTGAAG
CAAATGGACGATCGTACGAAAAAGAACAGTATCGGGACCGAGAAAGGGAT
CGGAAGCGTCCTAGAGAGAGCCGACGCAGTAGACATGACAGCCGCAGCAG
GAGCAGGGACAGGAACTCTAGGCGGAGGGATAACAAACGAGAAGATGGCC
ATGAACGAGTGAGAGATCGAGAGAGGGATAGAGGGCGGGGGAGGGAGTGG
GGAAAGACCAGAGATCGAGATCGAGACAGAGACAGAGAGAGACGTCGTGA
TCGCGGGGACAGAGACAACAGAAAGAGCCGGCGATAAATGTTCGAACGGC
GGATGGGCGCGGAACCTTCAGGCGCAATGTCACCGCGATCGATGAAGGTC
CTACGGGACGAAATGCTTCGCGTCGAGCTACATGTTTTGAAGGAGCTTGG
GTTCGGATTCTATAACATCATGGATCATCCCCACAAATTCATTCTCTACT
ACTTGAGAGTTTTGGAGCTAGACATTGAAGGAGACGTTTCCCAACGGGCT
TGGAACTACATCAATGACTCGCTACGTACAGACCTGTCTCTCAGATTTCG
CTCTGAGATGATCGCCTGTGCGGCGATCTATATGGCCTCTCGCTCGCTTG
GAATAAAACTTCCTGATAACCCTCCATGGTGGGTCCTCTTCAACGCTGAC
TTAAAGGTAATTGGCGAAATATGCAACACCATTCTGGCTCTTTACCTAAG
ACCGAAGATATCTTTCTTAGAGCCCCTGTGCGAGAGGAGTGTCTTCAGAA
AAGGGGGTCCTCTACGCAAAGGTGCAGTAAGTAAGGGTACATTTGGAACT
CTAAATACTTCAGCCGAGACGGTAGAGGGATCTTCAGCGAGTTTGGCTTT
GCCAGGAACGGACCCATCGTCAACAGAAAACGAGATCCGCCGGGCTCGAG
ACGCGACCGAACCTACAGTTGAACCTGCTGCCGAACCTCCAGCCAACTCT
AGAGCCGAAACACCAACTGAAGCAACATCTAAAACCGAACCTGAAGCCGA
ATCTGCAGTAGCTGATGGTGATGATGGTGATGATGGTAGTGGTTGCACGG
ATAGTCCAGGGCTGGCGGCTTCTTCAGATGTAATTGCTGTAGGTGGCGGC
GGCGGTGAAGACAACGAAGGCGGCGCTGGCGTGACACGTACGGAAGCAGG
ACAAGAACAGGGCAGTGAAATCCGAAGCAGGAGCGAGAGCCAAAGCAGGA
GTCGGAGCGGCAGCAAAAGCCACACGAGCCACAGTACAAGCCACAGTGGT
CCCGGCCTGGAACGAGATGACCGCATAGAAGCTGAAGCAAATGGACGATC
GTACGAAAAAGAACAGTATCGGGACCGAGAAAGGGATCGGAAGCGTCCTA
GAGAGAGCCGACGCAGTAGACATGACAGCCGCAGCAGGAGCAGGGACAGG
AACTCTAGGCGGAGGGATAACAAACGAGAAGATGGCCATGAACGAGTGAG
AGATCGAGAGAGGGATAGAGGGCGGGGGAGGGAGTGGGGAAAGACCAGAG
ATCGAGATCGAGACAGAGACAGAGAGAGACGTCGTGATCGCGGGGACAGA
GACAACAGAAAGAGCCGGCGATAA