prot_H-elongata_contig80373.15688.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80373.15688.1
Unique Nameprot_H-elongata_contig80373.15688.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length41
Homology
BLAST of mRNA_H-elongata_contig80373.15688.1 vs. uniprot
Match: A0A6H5K9D2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9D2_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 3.140e-13
Identity = 32/41 (78.05%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 VHDEVILEGPEETAEEALAETLNCMEQPWDGVGLKGLRVSV 41
            VHDEVILEGPEE+AEEALAET+ CM+QPWDG+GL+ LRV +
Sbjct: 1548 VHDEVILEGPEESAEEALAETVRCMQQPWDGIGLRELRVDL 1588          
BLAST of mRNA_H-elongata_contig80373.15688.1 vs. uniprot
Match: D8LMQ5_ECTSI (Pol1-like DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ5_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 1.100e-12
Identity = 31/41 (75.61%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 VHDEVILEGPEETAEEALAETLNCMEQPWDGVGLKGLRVSV 41
            VHDEVILEGPEE+A+EALAET+ CM+QPWDG+GL+ LRV +
Sbjct: 1419 VHDEVILEGPEESAKEALAETVRCMQQPWDGIGLRELRVDL 1459          
BLAST of mRNA_H-elongata_contig80373.15688.1 vs. uniprot
Match: A0A7S1XU43_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU43_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 5.090e-9
Identity = 28/41 (68.29%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    1 VHDEVILEGPEETAEEALAETLNCMEQPWDGVGLKGLRVSV 41
            VHDEVILEGPEE  +EALAE   CME PWD  GLK L+V +
Sbjct:  393 VHDEVILEGPEEQVDEALAEVRRCMEAPWDDFGLKPLKVEL 433          
BLAST of mRNA_H-elongata_contig80373.15688.1 vs. uniprot
Match: A0A7S4CWA7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CWA7_9EUGL)

HSP 1 Score: 57.4 bits (137), Expect = 1.780e-8
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    1 VHDEVILEGPEETAEEALAETLNCMEQPWDGVGLKGLRVSV 41
            +HDEVI+EGPEE  EEA+AE   CME+PWD VGL  +RV +
Sbjct:  551 IHDEVIVEGPEEHWEEAMAEVKKCMEEPWDNVGLGPMRVKL 591          
BLAST of mRNA_H-elongata_contig80373.15688.1 vs. uniprot
Match: A0A7S2BNW5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNW5_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.200e-8
Identity = 29/43 (67.44%), Postives = 33/43 (76.74%), Query Frame = 0
Query:    1 VHDEVILEGPEETAEEALAETLNCMEQPW--DGVGLKGLRVSV 41
            +HDEVILEGPEE  EEAL E  +CME PW  DGVGL  LRV++
Sbjct:  146 IHDEVILEGPEEHVEEALNEVRSCMEHPWSDDGVGLGELRVTL 188          
BLAST of mRNA_H-elongata_contig80373.15688.1 vs. uniprot
Match: A0A6U7X8D5_9EUGL (Hypothetical protein n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6U7X8D5_9EUGL)

HSP 1 Score: 56.2 bits (134), Expect = 2.230e-8
Identity = 25/39 (64.10%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    1 VHDEVILEGPEETAEEALAETLNCMEQPWDGVGLKGLRV 39
            +HDEVI+EGPEE  EEA AE + CME+PWD  GL+ L+V
Sbjct:  149 IHDEVIVEGPEEHVEEAQAEVVRCMEEPWDDYGLERLKV 187          
BLAST of mRNA_H-elongata_contig80373.15688.1 vs. uniprot
Match: A0A7S1N8T0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N8T0_9EUGL)

HSP 1 Score: 56.2 bits (134), Expect = 4.540e-8
Identity = 25/39 (64.10%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    1 VHDEVILEGPEETAEEALAETLNCMEQPWDGVGLKGLRV 39
            +HDEVI+EGPEE  EEA AE + CME+PWD  GL+ L+V
Sbjct:  514 IHDEVIVEGPEEHVEEAQAEVVRCMEEPWDDYGLERLKV 552          
BLAST of mRNA_H-elongata_contig80373.15688.1 vs. uniprot
Match: A0A510EYA4_BIGNA (Plastid-targeted DNA polymerase n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A510EYA4_BIGNA)

HSP 1 Score: 55.5 bits (132), Expect = 8.470e-8
Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 0
Query:    1 VHDEVILEGPEETAEEALAETLNCMEQPWDGVGLKGLRVSV 41
            VHDEVI+EGPEE AE AL E ++CM  P+DGVGL+ L+V +
Sbjct: 1197 VHDEVIIEGPEEHAEAALQEVISCMTAPFDGVGLRPLKVDL 1237          
BLAST of mRNA_H-elongata_contig80373.15688.1 vs. uniprot
Match: A0A7S2K448_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K448_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 2.920e-7
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = 0
Query:    1 VHDEVILEGPEETAEEALAETLNCMEQPW 29
            +HDEVILEGPEETAEEA AE + CME PW
Sbjct:  140 IHDEVILEGPEETAEEAFAEVIKCMESPW 168          
BLAST of mRNA_H-elongata_contig80373.15688.1 vs. uniprot
Match: A0A7S1BFW0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BFW0_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 8.020e-7
Identity = 23/29 (79.31%), Postives = 24/29 (82.76%), Query Frame = 0
Query:    1 VHDEVILEGPEETAEEALAETLNCMEQPW 29
            VHDE+ILEGPEETAEEA  E L CME PW
Sbjct:  141 VHDEIILEGPEETAEEAFEEVLQCMESPW 169          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80373.15688.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9D2_9PHAE3.140e-1378.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMQ5_ECTSI1.100e-1275.61Pol1-like DNA polymerase n=1 Tax=Ectocarpus silicu... [more]
A0A7S1XU43_9STRA5.090e-968.29Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4CWA7_9EUGL1.780e-863.41Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S2BNW5_9STRA2.200e-867.44Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6U7X8D5_9EUGL2.230e-864.10Hypothetical protein n=2 Tax=Eutreptiella gymnasti... [more]
A0A7S1N8T0_9EUGL4.540e-864.10Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A510EYA4_BIGNA8.470e-863.41Plastid-targeted DNA polymerase n=1 Tax=Bigelowiel... [more]
A0A7S2K448_9STRA2.920e-779.31Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1BFW0_9STRA8.020e-779.31Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80373contigH-elongata_contig80373:610..732 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80373.15688.1mRNA_H-elongata_contig80373.15688.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80373 610..732 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80373.15688.1 ID=prot_H-elongata_contig80373.15688.1|Name=mRNA_H-elongata_contig80373.15688.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=41bp
VHDEVILEGPEETAEEALAETLNCMEQPWDGVGLKGLRVSV
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