mRNA_H-elongata_contig80363.15687.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig80363.15687.1 vs. uniprot
Match: D8LI15_ECTSI (Folate/biopterin transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI15_ECTSI) HSP 1 Score: 185 bits (470), Expect = 1.170e-53 Identity = 85/110 (77.27%), Postives = 99/110 (90.00%), Query Frame = 1
Query: 1 RTHHESIANMGNIQASGYIARYFGSALGAIGGAVLYNKDSWGWGLSISTLFWINGLVPLLLVIPLMPFFFEEPKPKKTGVLKRHVNELWDLVQKKAVWKPMIFVYLYNAL 330
+T ES++NMGNIQASGYIARYFGSA+GA+GGAVLYNKD+WGWGL+IS LFWIN LVPL+LV+PLMPF E+ KP++ GVLKRH +ELW LVQK AVW+PMIFVYLYNAL
Sbjct: 248 KTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVMPLMPFLLEDKKPREKGVLKRHSDELWTLVQKTAVWRPMIFVYLYNAL 357
BLAST of mRNA_H-elongata_contig80363.15687.1 vs. uniprot
Match: A0A835YTY0_9STRA (Folate/biopterin transporter n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTY0_9STRA) HSP 1 Score: 118 bits (296), Expect = 6.480e-29 Identity = 58/113 (51.33%), Postives = 77/113 (68.14%), Query Frame = 1
Query: 1 RTHHESIANMGNIQASGYIARYFGSALGAIGGAVLYNKDSWGWGLSISTLFWINGLVPLLLVIPLMPFFFEEPK---PKKTGVLKRHVNELWDLVQKKAVWKPMIFVYLYNAL 330
RT ES + G +QASGYIAR FGSA+G+ GA++YN+ +WGWGLSI+ + IN +VPL V P +P+ E K P V + H E+W LVQK+ VW+PM FVY+YNA+
Sbjct: 231 RTKLESTKHRGTVQASGYIARAFGSAVGSTAGALVYNQANWGWGLSIAQIMLINAVVPLACVSPFIPYLKETVKTSLPTARHVWRTHWQEIWALVQKRVVWQPMTFVYIYNAM 343
BLAST of mRNA_H-elongata_contig80363.15687.1 vs. uniprot
Match: A0A7S1FNC7_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FNC7_9STRA) HSP 1 Score: 103 bits (256), Expect = 2.390e-23 Identity = 49/110 (44.55%), Postives = 71/110 (64.55%), Query Frame = 1
Query: 1 RTHHESIANMGNIQASGYIARYFGSALGAIGGAVLYNKDSWGWGLSISTLFWINGLVPLLLVIPLMPFFFEEPKPKKTGVLKRHVNELWDLVQKKAVWKPMIFVYLYNAL 330
R+ +ES+ N G +Q+ GYI R+FGS +GA GAV+YNKD W + L IS +F+IN P++ ++PL+PF E + +L+ Q KAVW+PM FVY+YNA+
Sbjct: 419 RSAYESLENRGQMQSKGYIVRFFGSVIGATIGAVVYNKDDWKFYLPISLVFFINAAFPMIFLLPLVPFLMEIETQCEPRNFVTQCKDLFHTAQLKAVWQPMTFVYIYNAM 528
BLAST of mRNA_H-elongata_contig80363.15687.1 vs. uniprot
Match: A0A6V1WMI5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WMI5_HETAK) HSP 1 Score: 99.8 bits (247), Expect = 3.210e-22 Identity = 47/110 (42.73%), Postives = 67/110 (60.91%), Query Frame = 1
Query: 1 RTHHESIANMGNIQASGYIARYFGSALGAIGGAVLYNKDSWGWGLSISTLFWINGLVPLLLVIPLMPFFFEEPKPKKTGVLKRHVNELWDLVQKKAVWKPMIFVYLYNAL 330
R+ HES G IQA GYI R+ GS LG+ GAVLYN+D+WGWGL+ +F +N VP +++ P M + + K V E+W VQK+ +W+PM F++ YN +
Sbjct: 186 RSQHESDDERGTIQAQGYIIRFVGSILGSAMGAVLYNRDTWGWGLTTPQMFALNAFVPFVVLYPAMAYLRDASDLKPIPV-PIQCREIWGAVQKRNIWQPMAFIFAYNVM 294
BLAST of mRNA_H-elongata_contig80363.15687.1 vs. uniprot
Match: A0A1Z5K9Z9_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9Z9_FISSO) HSP 1 Score: 98.6 bits (244), Expect = 9.860e-22 Identity = 49/114 (42.98%), Postives = 71/114 (62.28%), Query Frame = 1
Query: 1 RTHHESIANMGNIQASGYIARYFGSALGAIGGAVLYNKDSWGWGLSISTLFWINGLVPLLLVIPLMPFFFEEPKPKKTGVLKRHV----NELWDLVQKKAVWKPMIFVYLYNAL 330
R+ +ES G +Q+ GYI R+FGS +GA GA++YNKD W W L I +F+IN PL+ ++P +P+ E +T L ++ EL+ Q +AVW+PM FVY+YNAL
Sbjct: 335 RSRYESQEKRGTMQSKGYIVRFFGSTVGATIGALVYNKDDWDWSLPIRLIFFINAAFPLIFLLPFVPYLLE----LETDCLPKNFWDQCRELFHTAQLRAVWQPMTFVYVYNAL 444
BLAST of mRNA_H-elongata_contig80363.15687.1 vs. uniprot
Match: D7FZP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZP1_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 2.820e-20 Identity = 41/108 (37.96%), Postives = 73/108 (67.59%), Query Frame = 1
Query: 1 RTHHESIANMGNIQASGYIARYFGSALGAIGGAVLYNKDSWGWGLSISTLFWINGLVPLLLVIPLMPFFFEEPKPKKTGVLKRHVNELWDLVQKKAVWKPMIFVYLYN 324
R E+ + G +QA+ Y R+ G+ +G +GGA+L+N+ +WGWGL+ + I ++P+L++ P + + +EE + K+T +K V ++WD +Q +AVW+PM FVY++N
Sbjct: 215 RARGEAEESRGQMQATCYAIRFAGNVIGCLGGALLFNRGAWGWGLTFRQVCLIMSMMPVLVLGPAVVYLWEE-RSKETKGVKNQVRDIWDTIQLQAVWRPMAFVYIFN 321
BLAST of mRNA_H-elongata_contig80363.15687.1 vs. uniprot
Match: A0A7S1TWA3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWA3_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 7.490e-20 Identity = 44/111 (39.64%), Postives = 67/111 (60.36%), Query Frame = 1
Query: 1 RTHHESIANMGNIQASGYIARYFGSALGAIGGAVLYNKDSWGWGLSISTLFWINGLVPLLLVIPLMPFFFEEPKPKKTGV-LKRHVNELWDLVQKKAVWKPMIFVYLYNAL 330
R+ +E G +QA+ Y R+FGS LGA G ++YNKD+WGWGLS + + ++ G+ PLL V+P +E+P + + ++W+ V AVW PM FVY+YN +
Sbjct: 265 RSRYEPSEGRGQMQATCYALRFFGSVLGAGTGTLVYNKDAWGWGLSFAQVCFVLGVFPLLFVVPFAYMVWEKPLSEAGAKSVPEQCRDIWNTVTLDAVWMPMTFVYIYNVM 375
BLAST of mRNA_H-elongata_contig80363.15687.1 vs. uniprot
Match: W7TKM6_9STRA (Folate biopterin transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKM6_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 4.870e-19 Identity = 39/106 (36.79%), Postives = 68/106 (64.15%), Query Frame = 1
Query: 13 ESIANMGNIQASGYIARYFGSALGAIGGAVLYNKDSWGWGLSISTLFWINGLVPLLLVIPLMPFFFEEPKPKKTGVLKRHVNELWDLVQKKAVWKPMIFVYLYNAL 330
E +G++Q+ GY+ARY G+ +GA G +LYN+ W WGLSIS+++ +NGL ++LV+P + + + LK + ++W +VQ++ ++ PM F+ +YN L
Sbjct: 261 EPEGRVGHMQSVGYVARYVGNVVGATLGTILYNEKEWHWGLSISSIYLLNGLAAVVLVLPFTYHLSDPNQVLEARSLKEQLGDIWKMVQRRTIYVPMSFIAVYNML 366
BLAST of mRNA_H-elongata_contig80363.15687.1 vs. uniprot
Match: A0A7S2XY88_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY88_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 2.140e-18 Identity = 39/106 (36.79%), Postives = 66/106 (62.26%), Query Frame = 1
Query: 13 ESIANMGNIQASGYIARYFGSALGAIGGAVLYNKDSWGWGLSISTLFWINGLVPLLLVIPLMPFFFEEPKPKKTGVLKRHVNELWDLVQKKAVWKPMIFVYLYNAL 330
E + G QA+ Y R+ GS G +GG +LYN +WGWGL+ + +NG++PL++++PL+ +E + V + ++W ++++AVW+PM F+YLYN L
Sbjct: 178 EEEGSKGQAQATCYAVRFGGSVAGCLGGTLLYNSTNWGWGLTFPQVCLVNGVLPLVVLLPLLIPLWERQGSQGKSV-PQQCKDVWGTIEQRAVWQPMAFIYLYNLL 282
BLAST of mRNA_H-elongata_contig80363.15687.1 vs. uniprot
Match: D7G1P4_ECTSI (Biopterin transport-related protein BT1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P4_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 2.390e-16 Identity = 44/115 (38.26%), Postives = 67/115 (58.26%), Query Frame = 1
Query: 1 RTHHESIANMGNIQASGYIARYFGSALGAIGGAVLYNKDSWGWGLSISTLFWINGLVPLLLVIPLMPFFFEEPKPKKTGV-----LKRHVNELWDLVQKKAVWKPMIFVYLYNAL 330
R+ HE G++QA GY R+ GS LG+ G +LYNKD WGWGLSI LF++N + P+L + P + E V L++ E++ +++KAV+ PM +++YN L
Sbjct: 196 RSKHEPAETRGSMQAIGYSVRFVGSLLGSTMGLLLYNKDEWGWGLSIQQLFFLNAIFPVLFMGPWVWSLRETAVVTDGNVPIEQRLRQQCTEVFRALEQKAVYGPMGLIFIYNLL 310 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80363.15687.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig80363.15687.1 >prot_H-elongata_contig80363.15687.1 ID=prot_H-elongata_contig80363.15687.1|Name=mRNA_H-elongata_contig80363.15687.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp MGNIQASGYIARYFGSALGAIGGAVLYNKDSWGWGLSISTLFWINGLVPLback to top mRNA from alignment at H-elongata_contig80363:194..523+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig80363.15687.1 ID=mRNA_H-elongata_contig80363.15687.1|Name=mRNA_H-elongata_contig80363.15687.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=330bp|location=Sequence derived from alignment at H-elongata_contig80363:194..523+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig80363:194..523+ >mRNA_H-elongata_contig80363.15687.1 ID=mRNA_H-elongata_contig80363.15687.1|Name=mRNA_H-elongata_contig80363.15687.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=606bp|location=Sequence derived from alignment at H-elongata_contig80363:194..523+ (Himanthalia elongata Himel1 dioecious)back to top |