prot_H-elongata_contig80213.15675.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80213.15675.1
Unique Nameprot_H-elongata_contig80213.15675.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length110
Homology
BLAST of mRNA_H-elongata_contig80213.15675.1 vs. uniprot
Match: D7FTP0_ECTSI (Similar to E1a binding protein P400 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP0_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 7.200e-48
Identity = 87/99 (87.88%), Postives = 94/99 (94.95%), Query Frame = 0
Query:    2 VLTGGKERPDVLGQALREKNRHWDFLLKEMMWMADDFQQERKRHIASAEKRQAKSVVLHFRGHEARMAKKAKEEQLALKRGASKVAREVRAFWGKLNKV 100
             +TGGKER DVLGQALREKNRHWDFLLKEMMWMADDFQQERKRH+ SA K+QA+SV+LHFRGHEAR AKKAKEEQLAL+RGASKVAR+VRAFWGKLNKV
Sbjct:  204 AITGGKERQDVLGQALREKNRHWDFLLKEMMWMADDFQQERKRHM-SARKKQARSVLLHFRGHEARKAKKAKEEQLALRRGASKVARDVRAFWGKLNKV 301          
BLAST of mRNA_H-elongata_contig80213.15675.1 vs. uniprot
Match: A0A6H5KKD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKD6_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 1.210e-39
Identity = 77/94 (81.91%), Postives = 83/94 (88.30%), Query Frame = 0
Query:    7 KERPDVLGQALREKNRHWDFLLKEMMWMADDFQQERKRHIASAEKRQAKSVVLHFRGHEARMAKKAKEEQLALKRGASKVAREVRAFWGKLNKV 100
            K   DVLGQALREKNRHWDFLLKEMMWMADDFQQERKRH+A       +SV+L+FRGHEAR AKKAKEEQLAL+RGASKVAR+VRAFWGKLNKV
Sbjct:  308 KRLQDVLGQALREKNRHWDFLLKEMMWMADDFQQERKRHMA-------RSVLLYFRGHEARKAKKAKEEQLALRRGASKVARDVRAFWGKLNKV 394          
BLAST of mRNA_H-elongata_contig80213.15675.1 vs. uniprot
Match: A0A7R9UGU8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGU8_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.180e-17
Identity = 49/101 (48.51%), Postives = 66/101 (65.35%), Query Frame = 0
Query:    2 VLTGGKERPDVLGQALREKNRHWDFLLKEMMWMADDFQQERKRHIASAEKRQAKSVVLHFRGHEARMAKKAKEEQLALKRGASKVAREVRAFWGKLNKVRG 102
             L GGK    V  +A R +  HWDFLLKEM+WM++DF QE+KRH   A K+  K+V  +FR  EAR A+  K+E   L+R A+++ R V+ FW K+NKV G
Sbjct:   91 TLNGGKRVRRVAIEAERRET-HWDFLLKEMLWMSEDFGQEKKRHQGRA-KKLVKAVETYFRQAEARKARAQKDELARLRRRAAQLGRSVKLFWSKINKVVG 189          
BLAST of mRNA_H-elongata_contig80213.15675.1 vs. uniprot
Match: A0A835ZKJ3_9STRA (SNF2 family N-terminal domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKJ3_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 4.090e-15
Identity = 40/78 (51.28%), Postives = 59/78 (75.64%), Query Frame = 0
Query:   23 HWDFLLKEMMWMADDFQQERKRHIASAEKRQAKSVVLHFRGHEARMAKKAKEEQLALKRGASKVAREVRAFWGKLNKV 100
            HW+ LLKEM+WM++DF +E+ RH    +++ +KSV L+F   EAR A++ +E+  A +R A++VAREVR FWGKLN+V
Sbjct:    2 HWNSLLKEMLWMSEDFTKEKARH-RGFQRKLSKSVQLYFNNAEAREARREREQLAAERRAAARVAREVRHFWGKLNRV 78          
BLAST of mRNA_H-elongata_contig80213.15675.1 vs. uniprot
Match: A0A662Y0X3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0X3_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 4.560e-13
Identity = 46/106 (43.40%), Postives = 66/106 (62.26%), Query Frame = 0
Query:    2 VLTGGKERP-------DVLGQALREKNRHWDFLLKEMMWMADDFQQERKRHIASAEKRQAKSVVLHFRGHEARMAKKAKEEQLALKRGASKVAREVRAFWGKLNKV 100
             LT GK  P       D  G+  R    H DFLL+EM WMA DF QERK  + SA +  A+++V H    EAR+A++ K E++A +R A++V R+V+ FWGK++K+
Sbjct:   76 ALTLGKPLPRDVERGCDASGR--RVTRTHRDFLLQEMEWMAADFAQERKWRVKSA-RTVAQALVSHLDRQEARLARQKKGEEVAKRRTAARVGRDVKKFWGKIDKI 178          
BLAST of mRNA_H-elongata_contig80213.15675.1 vs. uniprot
Match: A0A662XZW8_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XZW8_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.170e-12
Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = 0
Query:    2 VLTGGKERPDVLGQALREKNR-----HWDFLLKEMMWMADDFQQERKRHIASAEKRQAKSVVLHFRGHEARMAKKAKEEQLALKRGASKVAREVRAFWGKLNKV 100
             LT GK  P  + +      R     H DFLL+EM WMA DF QERK  + SA +  A+++  H    EAR+A++ K E++A +R A++V R+V+ FWGK++K+
Sbjct:   76 ALTLGKPLPRDMERGCDASGRRVTRAHRDFLLQEMEWMAADFSQERKWRVKSA-RTVAQALASHLDRQEARLARQKKGEEVAKRRTAARVGRDVKKFWGKIDKI 178          
BLAST of mRNA_H-elongata_contig80213.15675.1 vs. uniprot
Match: A0A448ZDW5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZDW5_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 9.040e-11
Identity = 35/78 (44.87%), Postives = 51/78 (65.38%), Query Frame = 0
Query:   23 HWDFLLKEMMWMADDFQQERKRHIASAEKRQAKSVVLHFRGHEARMAKKAKEEQLALKRGASKVAREVRAFWGKLNKV 100
            HWDF+LKE+MW+  DF  ERKR IASA+K  A SV+      E R  ++ ++ +   K+ ASK+ R+V+ +W KL K+
Sbjct:  112 HWDFVLKELMWLGTDFSSERKRQIASAKKLGA-SVLKFHASRETRRLRRLQQAESKRKKVASKLGRDVKGWWTKLEKI 188          
BLAST of mRNA_H-elongata_contig80213.15675.1 vs. uniprot
Match: A0A1E7FQV3_9STRA (SNF2_N-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQV3_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.190e-10
Identity = 35/78 (44.87%), Postives = 54/78 (69.23%), Query Frame = 0
Query:   23 HWDFLLKEMMWMADDFQQERKRHIASAEKRQAKSVVLHFRGHEARMAKKAKEEQLALKRGASKVAREVRAFWGKLNKV 100
            HWDF++KEMMW+  DF+ ERKR IA+A K+ A SV  +    E R  ++  + +L  K+ A+K++R+V+++W KL KV
Sbjct:   12 HWDFVMKEMMWLGADFKSERKRQIAAA-KKLAVSVQKYHDTKEKRRLRQLSQAELKRKKLAAKISRDVKSWWTKLEKV 88          
BLAST of mRNA_H-elongata_contig80213.15675.1 vs. uniprot
Match: A0A8I6RHL2_CIMLE (Uncharacterized protein n=3 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6RHL2_CIMLE)

HSP 1 Score: 67.0 bits (162), Expect = 1.240e-10
Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 0
Query:    3 LTGGKERPDVLGQALREKNRHWDFLLKEMMWMADDFQQERKRHIASAEKRQAKSVVLHFRGHEARMAKKAKEEQLALKRGASKVAREVRAFWGKLNKV 100
            L   K  P V    L     HWD+L++EM W+A DF QERK   A+A K+ AK V  +F+  E    K  K +++ LKR AS +A+E++ FWG + K+
Sbjct:  258 LWAEKRLPKV--HELSRTKAHWDYLIEEMTWLAADFAQERKWKKAAA-KKCAKMVQKYFQEKEVLAQKAVKAQEMQLKRIASFIAKEIKTFWGNVEKL 352          
BLAST of mRNA_H-elongata_contig80213.15675.1 vs. uniprot
Match: M4B9S5_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B9S5_HYAAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.690e-10
Identity = 35/83 (42.17%), Postives = 56/83 (67.47%), Query Frame = 0
Query:   18 REKNRHWDFLLKEMMWMADDFQQERKRHIASAEKRQAKSVVLHFRGHEARMAKKAKEEQLALKRGASKVAREVRAFWGKLNKV 100
            R +  H DFLL+EM WMA DF QERK  + +A K  ++++V +    EAR+ ++ K + +A +R A++V REV+ FW K++K+
Sbjct:   97 RVERFHRDFLLQEMEWMAADFSQERKWRVRNA-KALSQALVSYLSRKEARLVRQQKRDDVARRRAAARVGREVKKFWSKIDKI 178          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80213.15675.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTP0_ECTSI7.200e-4887.88Similar to E1a binding protein P400 (Partial) (Fra... [more]
A0A6H5KKD6_9PHAE1.210e-3981.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9UGU8_9STRA2.180e-1748.51Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A835ZKJ3_9STRA4.090e-1551.28SNF2 family N-terminal domain-containing protein (... [more]
A0A662Y0X3_9STRA4.560e-1343.40Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A662XZW8_9STRA1.170e-1241.35Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A448ZDW5_9STRA9.040e-1144.87Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1E7FQV3_9STRA1.190e-1044.87SNF2_N-domain-containing protein (Fragment) n=1 Ta... [more]
A0A8I6RHL2_CIMLE1.240e-1040.82Uncharacterized protein n=3 Tax=Cimex lectularius ... [more]
M4B9S5_HYAAE1.690e-1042.17Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014012Helicase/SANT-associated domainSMARTSM00573bromneu2coord: 15..84
e-value: 1.6E-5
score: 34.3
IPR014012Helicase/SANT-associated domainPFAMPF07529HSAcoord: 19..81
e-value: 1.2E-8
score: 35.1
IPR014012Helicase/SANT-associated domainPROSITEPS51204HSAcoord: 11..84
score: 12.201
NoneNo IPR availablePANTHERPTHR45685FAMILY NOT NAMEDcoord: 18..100
NoneNo IPR availablePANTHERPTHR45685:SF1HELICASE SRCAPcoord: 18..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80213contigH-elongata_contig80213:263..1188 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80213.15675.1mRNA_H-elongata_contig80213.15675.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80213 263..1188 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80213.15675.1 ID=prot_H-elongata_contig80213.15675.1|Name=mRNA_H-elongata_contig80213.15675.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=110bp
KVLTGGKERPDVLGQALREKNRHWDFLLKEMMWMADDFQQERKRHIASAE
KRQAKSVVLHFRGHEARMAKKAKEEQLALKRGASKVAREVRAFWGKLNKV
RGGGRRENV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014012HSA_dom