mRNA_H-elongata_contig8014.15670.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig8014.15670.1
Unique NamemRNA_H-elongata_contig8014.15670.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig8014.15670.1 vs. uniprot
Match: A0A6H5KDD3_9PHAE (Serine O-acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD3_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 3.470e-62
Identity = 98/140 (70.00%), Postives = 116/140 (82.86%), Query Frame = 1
Query:    1 GFWALFWYRLSHALLKRKVPFISALVPRFTMSLVRYATAIDIHPGAEISSDGILIDHGVGLVVGETAVVGGRVTLYHGVTLGNSGKKLXXXXXXXXXIGERVVIGAGAKILGDIEIGDDVLVGANSIVTKPVPRNHTAVG 420
            GFWALFWYRLSHALL R +P +S++VPR  MS VRYAT+IDIHP A+IS +G+LIDHG  LV+G TA++G RVTLYHGVTLGNSGKK+         IG+RVV+GAGAKILGDI + DDVLVGANS+VTK VP++HTAVG
Sbjct:   50 GFWALFWYRLSHALLMRNIPGLSSVVPRLVMSFVRYATSIDIHPAAQISREGVLIDHGAALVIGATAIIGARVTLYHGVTLGNSGKKVSPGGKRHPTIGDRVVLGAGAKILGDITVEDDVLVGANSVVTKSVPKHHTAVG 189          
BLAST of mRNA_H-elongata_contig8014.15670.1 vs. uniprot
Match: D7FY76_ECTSI (Serine O-acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY76_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 1.010e-57
Identity = 96/140 (68.57%), Postives = 111/140 (79.29%), Query Frame = 1
Query:    1 GFWALFWYRLSHALLKRKVPFISALVPRFTMSLVRYATAIDIHPGAEISSDGILIDHGVGLVVGETAVVGGRVTLYHGVTLGNSGKKLXXXXXXXXXIGERVVIGAGAKILGDIEIGDDVLVGANSIVTKPVPRNHTAVG 420
            GFWALFWYRLSHALL R +P +S++VPR  MS+VRYAT+IDIHP A+IS +G+LIDHG  LVV        RVTLYHGVTLGNSGKK+         IG+RVV+GAGAKILGDI I DDVLVGANS+VTK VP++HTAVG
Sbjct:   52 GFWALFWYRLSHALLMRNIPGLSSVVPRLAMSIVRYATSIDIHPAAKISEEGVLIDHGAALVVXXXXXXXXRVTLYHGVTLGNSGKKVSPGGKRHPTIGDRVVLGAGAKILGDITIEDDVLVGANSVVTKSVPKHHTAVG 191          
BLAST of mRNA_H-elongata_contig8014.15670.1 vs. uniprot
Match: A0A7S2V0R1_9STRA (Serine O-acetyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0R1_9STRA)

HSP 1 Score: 150 bits (378), Expect = 4.510e-42
Identity = 74/140 (52.86%), Postives = 99/140 (70.71%), Query Frame = 1
Query:    1 GFWALFWYRLSHALLKRKVPFISALVPRFTMSLVRYATAIDIHPGAEISSDGILIDHGVGLVVGETAVVGGRVTLYHGVTLGNSGKKLXXXXXXXXXIGERVVIGAGAKILGDIEIGDDVLVGANSIVTKPVPRNHTAVG 420
            GFWALF+YRLSH ++K K+P    L+PR  M ++R  TA+DIHP A+IS +G+ IDH  G+V+GETA +G   T+YH VTLG +GK +         +G+  +IGAGAK+LG I IGD+  VGANS+VTK +P N TA+G
Sbjct:   49 GFWALFFYRLSHVIVKWKIP----LIPRIIMGMIRIMTAVDIHPRAKISDEGVFIDHATGVVIGETAEIGAGTTIYHQVTLGGTGKIMHRGQRRHPIVGKNCMIGAGAKLLGAITIGDNCQVGANSVVTKSIPDNCTALG 184          
BLAST of mRNA_H-elongata_contig8014.15670.1 vs. uniprot
Match: D7FY75_ECTSI (Serine O-acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY75_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 6.770e-39
Identity = 65/88 (73.86%), Postives = 77/88 (87.50%), Query Frame = 1
Query:    1 GFWALFWYRLSHALLKRKVPFISALVPRFTMSLVRYATAIDIHPGAEISSDGILIDHGVGLVVGETAVVGGRVTLYHGVTLGNSGKKL 264
            GFWALFWYRLSHALL R +P +S++VPR  MS+VRYAT+IDIHP A+IS +G+LIDHG  LVVG TA++G RVTLYHGVTLGNSGKK+
Sbjct:   52 GFWALFWYRLSHALLMRNIPGLSSVVPRLAMSIVRYATSIDIHPAAQISEEGVLIDHGAALVVGATAIIGARVTLYHGVTLGNSGKKV 139          
BLAST of mRNA_H-elongata_contig8014.15670.1 vs. uniprot
Match: A0A7S4D9L5_HETAK (Serine O-acetyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9L5_HETAK)

HSP 1 Score: 137 bits (346), Expect = 1.420e-36
Identity = 71/140 (50.71%), Postives = 90/140 (64.29%), Query Frame = 1
Query:    1 GFWALFWYRLSHALLKRKVPFISALVPRFTMSLVRYATAIDIHPGAEISSDGILIDHGVGLVVGETAVVGGRVTLYHGVTLGNSGKKLXXXXXXXXXIGERVVIGAGAKILGDIEIGDDVLVGANSIVTKPVPRNHTAVG 420
            GFWALF+YR+ HA+   K+P    L+PR  M  VR+ TA+DIHP AEIS  G+L DH  G V+G TA +G R T+YH VTLG SGK +         +G   +IG GAK+LG I +GD+  VGANS+VTK +P    A G
Sbjct:   51 GFWALFFYRICHAMWYFKIP----LLPRVIMGFVRFWTAVDIHPAAEISEGGVLFDHATGTVIGATAGIGARTTIYHQVTLGASGKPVPKGQRRHPIVGANCMIGCGAKVLGAIRVGDNCKVGANSVVTKALPDGAMACG 186          
BLAST of mRNA_H-elongata_contig8014.15670.1 vs. uniprot
Match: A0A1M5KJG8_9FIRM (Serine acetyltransferase n=1 Tax=Asaccharospora irregularis DSM 2635 TaxID=1121321 RepID=A0A1M5KJG8_9FIRM)

HSP 1 Score: 129 bits (324), Expect = 2.010e-35
Identity = 70/137 (51.09%), Postives = 95/137 (69.34%), Query Frame = 1
Query:   10 ALFWYRLSHALLKRKVPFISALVPRFTMSLVRYATAIDIHPGAEISSDGILIDHGVGLVVGETAVVGGRVTLYHGVTLGNSGKKLXXXXXXXXXIGERVVIGAGAKILGDIEIGDDVLVGANSIVTKPVPRNHTAVG 420
            A+ W+R+SH L K+K+ F + L+ + +    R+ T I+IHPGA+I + GILIDHG+G+V+GETA VG RVT+YHG TLG +GK           +G  VVIGAG K+LG I IG +V +GANS+V K +P + TAVG
Sbjct:   34 AIIWHRVSHFLYKKKMFFTARLISQIS----RFITGIEIHPGAKIGT-GILIDHGMGVVIGETAEVGNRVTIYHGTTLGGTGKD---KGKRHPTVGNDVVIGAGTKVLGPINIGSNVKIGANSVVLKDIPDDSTAVG 162          
BLAST of mRNA_H-elongata_contig8014.15670.1 vs. uniprot
Match: A0A1C6CWJ6_9CLOT (Serine acetyltransferase n=3 Tax=Clostridia TaxID=186801 RepID=A0A1C6CWJ6_9CLOT)

HSP 1 Score: 127 bits (319), Expect = 1.180e-34
Identity = 69/137 (50.36%), Postives = 94/137 (68.61%), Query Frame = 1
Query:   10 ALFWYRLSHALLKRKVPFISALVPRFTMSLVRYATAIDIHPGAEISSDGILIDHGVGLVVGETAVVGGRVTLYHGVTLGNSGKKLXXXXXXXXXIGERVVIGAGAKILGDIEIGDDVLVGANSIVTKPVPRNHTAVG 420
            AL  +R++H   K K+ FI+ L+ +      R+ T I+IHPGA+I S  ILIDHG+G+V+GETAV+G RVT+YHG TLG +GK++         +G  V+IGAGAK+LG I IGD+  +GANS+V + VP N T VG
Sbjct:   34 ALISHRIAHCFYKHKMFFIARLISQIN----RFITGIEIHPGAKIGS-AILIDHGMGVVIGETAVIGNRVTIYHGTTLGGTGKEIGKRHPT---VGNDVIIGAGAKVLGPITIGDNSKIGANSVVLRNVPENSTVVG 162          
BLAST of mRNA_H-elongata_contig8014.15670.1 vs. uniprot
Match: A0A1G1GVW5_9BACT (Serine acetyltransferase n=2 Tax=unclassified Nitrospirae TaxID=1298915 RepID=A0A1G1GVW5_9BACT)

HSP 1 Score: 128 bits (322), Expect = 1.490e-34
Identity = 71/140 (50.71%), Postives = 93/140 (66.43%), Query Frame = 1
Query:    1 GFWALFWYRLSHALLKRKVPFISALVPRFTMSLVRYATAIDIHPGAEISSDGILIDHGVGLVVGETAVVGGRVTLYHGVTLGNSGKKLXXXXXXXXXIGERVVIGAGAKILGDIEIGDDVLVGANSIVTKPVPRNHTAVG 420
            GF AL +YR +H L KR+VPFI    PR    + R+ T I+IHPGA I S G+ IDHG+G+V+GET  +G  VTL+ GVTLG +GK+          +G  VV+GAGAK+LG I++GD V +GANS+V   VP + T VG
Sbjct:   34 GFHALLFYRFAHCLWKRRVPFI----PRAMSQVARFLTGIEIHPGAVIGS-GLFIDHGMGVVIGETTEIGDNVTLFQGVTLGGTGKQ---RGKRHPTLGSHVVVGAGAKVLGPIKVGDFVKIGANSVVLLDVPDHSTVVG 165          
BLAST of mRNA_H-elongata_contig8014.15670.1 vs. uniprot
Match: A5N2R8_CLOK5 (Serine acetyltransferase n=3 Tax=Clostridium kluyveri TaxID=1534 RepID=A5N2R8_CLOK5)

HSP 1 Score: 128 bits (322), Expect = 1.530e-34
Identity = 71/137 (51.82%), Postives = 90/137 (65.69%), Query Frame = 1
Query:   10 ALFWYRLSHALLKRKVPFISALVPRFTMSLVRYATAIDIHPGAEISSDGILIDHGVGLVVGETAVVGGRVTLYHGVTLGNSGKKLXXXXXXXXXIGERVVIGAGAKILGDIEIGDDVLVGANSIVTKPVPRNHTAVG 420
            AL WYR++H   K+K  FI+    RF     R  T I+IHPGA+I   G+ IDHG+G+V+GETA VG  VTLYHGVTLG +GK           +G  V IG+GAK+LG I +GD+V +GAN++V K VP N TAVG
Sbjct:   58 ALIWYRIAHFFYKKKCFFIA----RFISQAARALTGIEIHPGAQIGK-GLFIDHGMGVVIGETAEVGDNVTLYHGVTLGGTGKDTGKRHPT---VGNNVFIGSGAKLLGPIVVGDNVKIGANAVVLKDVPSNSTAVG 186          
BLAST of mRNA_H-elongata_contig8014.15670.1 vs. uniprot
Match: A0A162RMT2_9CLOT (Serine acetyltransferase n=1 Tax=Clostridium magnum DSM 2767 TaxID=1121326 RepID=A0A162RMT2_9CLOT)

HSP 1 Score: 127 bits (320), Expect = 1.830e-34
Identity = 74/137 (54.01%), Postives = 92/137 (67.15%), Query Frame = 1
Query:   10 ALFWYRLSHALLKRKVPFISALVPRFTMSLVRYATAIDIHPGAEISSDGILIDHGVGLVVGETAVVGGRVTLYHGVTLGNSGKKLXXXXXXXXXIGERVVIGAGAKILGDIEIGDDVLVGANSIVTKPVPRNHTAVG 420
            AL  +R+SHAL KRK  F++ L+ + +    R+ T I+IHPGA I   G+ IDHG+G+V+GETA +G  VTLYHGVTLG +GK           +G  V IG+GAKILG I IGD V VGANS+V K VP N TAVG
Sbjct:   37 ALIHHRISHALYKRKYFFLARLISQVS----RFFTGIEIHPGATIGK-GLFIDHGMGVVIGETAEIGDNVTLYHGVTLGGTGKDTGKRHPT---VGNNVTIGSGAKILGPIMIGDGVKVGANSVVLKDVPANCTAVG 165          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8014.15670.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDD3_9PHAE3.470e-6270.00Serine O-acetyltransferase n=1 Tax=Ectocarpus sp. ... [more]
D7FY76_ECTSI1.010e-5768.57Serine O-acetyltransferase n=1 Tax=Ectocarpus sili... [more]
A0A7S2V0R1_9STRA4.510e-4252.86Serine O-acetyltransferase n=1 Tax=Fibrocapsa japo... [more]
D7FY75_ECTSI6.770e-3973.86Serine O-acetyltransferase n=1 Tax=Ectocarpus sili... [more]
A0A7S4D9L5_HETAK1.420e-3650.71Serine O-acetyltransferase n=1 Tax=Heterosigma aka... [more]
A0A1M5KJG8_9FIRM2.010e-3551.09Serine acetyltransferase n=1 Tax=Asaccharospora ir... [more]
A0A1C6CWJ6_9CLOT1.180e-3450.36Serine acetyltransferase n=3 Tax=Clostridia TaxID=... [more]
A0A1G1GVW5_9BACT1.490e-3450.71Serine acetyltransferase n=2 Tax=unclassified Nitr... [more]
A5N2R8_CLOK51.530e-3451.82Serine acetyltransferase n=3 Tax=Clostridium kluyv... [more]
A0A162RMT2_9CLOT1.830e-3454.01Serine acetyltransferase n=1 Tax=Clostridium magnu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8014contigH-elongata_contig8014:8060..9298 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score138.7
Seed ortholog evalue2.1e-30
Seed eggNOG ortholog2880.D7FY75
Preferred nameSAT
KEGG rclassRC00004,RC00041
KEGG koko:K00640
KEGG ReactionR00586
KEGG Pathwayko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111
KEGG ModuleM00021
EggNOG free text desc.serine O-acetyltransferase activity
EggNOG OGsCOG0110@1,KOG4750@2759
EC2.3.1.30
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categorymitochondrion
Exons2
Model size420
Cds size420
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931207.5318663-CDS-H-elongata_contig8014:8059..82181622931207.5318663-CDS-H-elongata_contig8014:8059..8218Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8014 8060..8218 -
1691679741.8570588-CDS-H-elongata_contig8014:8059..82181691679741.8570588-CDS-H-elongata_contig8014:8059..8218Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8014 8060..8218 -
1622931207.5509107-CDS-H-elongata_contig8014:9037..92981622931207.5509107-CDS-H-elongata_contig8014:9037..9298Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8014 9038..9298 -
1691679741.8753314-CDS-H-elongata_contig8014:9037..92981691679741.8753314-CDS-H-elongata_contig8014:9037..9298Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8014 9038..9298 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8014.15670.1prot_H-elongata_contig8014.15670.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig8014 8060..9298 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig8014.15670.1

>prot_H-elongata_contig8014.15670.1 ID=prot_H-elongata_contig8014.15670.1|Name=mRNA_H-elongata_contig8014.15670.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp
GFWALFWYRLSHALLKRKVPFISALVPRFTMSLVRYATAIDIHPGAEISS
DGILIDHGVGLVVGETAVVGGRVTLYHGVTLGNSGKKLNPGAKRHPTIGE
RVVIGAGAKILGDIEIGDDVLVGANSIVTKPVPRNHTAVG
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mRNA from alignment at H-elongata_contig8014:8060..9298-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig8014.15670.1 ID=mRNA_H-elongata_contig8014.15670.1|Name=mRNA_H-elongata_contig8014.15670.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1239bp|location=Sequence derived from alignment at H-elongata_contig8014:8060..9298- (Himanthalia elongata Himel1 dioecious)
GGCTTCTGGGCTCTTTTTTGGTACAGACTGAGTCACGCCCTCCTCAAGCG TAAGGTGCCCTTTATATCGGCATTGGTGCCCAGATTCACCATGTCCCTCG TGCGCTACGCCACCGCCATCGACATCCACCCGGGTGCCGAAATATCGAGC GACGGTATCCTTATTGATCATGGAGTTGGGCTTGTGGTGGGCGAGACCGC CGTCGTCGGCGGACGGGTTACCCTGTATCACGGGGTAACACTTGGCAATT CTGGCAAAAAGGTATCGCCGTGTTCTTATTATTTTTTATACTTTTTGGAA TAAATATAAACATTTTTATAGAATACTTAATATATACTCTAATAAAATGA GACACCCAGGCAGCGGTACATGCTTGATTCGATGACTCAAGGATCGATAA TGTAATATGACGAGCTATTCTTCGTCTATCTACAGAACGTGGTCTACATT AACTCCGCTGGCATCCCTCGAGTATTGTTTTTTGGCTATGCTACTGTTCG GCCAATAATGTACCACCGCAATACTCGTGCAAGCAATATTATTATTGATC TGCAGAAACGTATCGACTGTAATCGTTACAACCGTTACGATTAGATTACC CGACGTTAGACAAGTATATATTGCATTAAGGCATTCTAAATGTATGTATG GACGGTCCCCGACTTTCTACTTGAAGCTAATACCCTCAAAAACGTATTAG GCCTTCGATTCAGGATAGTTCGGATAGCACAAGCATCGTGTTCAGGTTGG ATTTACTTCGAGCTTCTCTGTTATGTTATCTAAAAGCTTTAGGAGATATA TATTTAATGACAAATTCTCGCTTTTTCTCTTTCTCTTATAGTTATCTGGG TAAGCTCCACAGCCACTGTTGTGTCATCGATCCTCAGGGTCACACACACC ATTACTTCCGATGTTCGATAATACTATTAATTTATGTCTACGTATATTAC CCAGATATACGATGGTTGCTTACCCCTGCCGCACATTAGCATGGAGCGAG TTGATGAATCTTTGCCTGAGATTCTTACGCGTACGCCTGCGCCATTGCTC TAAAACGGTTGTCGGTTCTTAACAATACAGCTCAATCCAGGAGCGAAAAG GCACCCCACCATCGGCGAGAGAGTGGTCATCGGTGCAGGTGCCAAGATTC TGGGAGATATAGAGATCGGCGACGACGTTCTCGTTGGAGCCAACTCGATC GTCACCAAACCCGTACCACGGAACCACACAGCTGTGGGT
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Coding sequence (CDS) from alignment at H-elongata_contig8014:8060..9298-

>mRNA_H-elongata_contig8014.15670.1 ID=mRNA_H-elongata_contig8014.15670.1|Name=mRNA_H-elongata_contig8014.15670.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=840bp|location=Sequence derived from alignment at H-elongata_contig8014:8060..9298- (Himanthalia elongata Himel1 dioecious)
GGCTTCTGGGCTCTTTTTTGGTACAGACTGAGTCACGCCCTCCTCAAGCG
TAAGGTGCCCTTTATATCGGCATTGGTGCCCAGATTCACCATGTCCCTCG
TGCGCTACGCCACCGCCATCGACATCCACCCGGGTGCCGAAATATCGAGC
GACGGTATCCTTATTGATCATGGAGTTGGGCTTGTGGTGGGCGAGACCGC
CGTCGTCGGCGGACGGGTTACCCTGTATCACGGGGTAACACTTGGCAATT
CTGGCAAAAAGGGCTTCTGGGCTCTTTTTTGGTACAGACTGAGTCACGCC
CTCCTCAAGCGTAAGGTGCCCTTTATATCGGCATTGGTGCCCAGATTCAC
CATGTCCCTCGTGCGCTACGCCACCGCCATCGACATCCACCCGGGTGCCG
AAATATCGAGCGACGGTATCCTTATTGATCATGGAGTTGGGCTTGTGGTG
GGCGAGACCGCCGTCGTCGGCGGACGGGTTACCCTGTATCACGGGGTAAC
ACTTGGCAATTCTGGCAAAAAGCTCAATCCAGGAGCGAAAAGGCACCCCA
CCATCGGCGAGAGAGTGGTCATCGGTGCAGGTGCCAAGATTCTGGGAGAT
ATAGAGATCGGCGACGACGTTCTCGTTGGAGCCAACTCGATCGTCACCAA
ACCCGTACCACGGAACCACACAGCTGTGGGTCTCAATCCAGGAGCGAAAA
GGCACCCCACCATCGGCGAGAGAGTGGTCATCGGTGCAGGTGCCAAGATT
CTGGGAGATATAGAGATCGGCGACGACGTTCTCGTTGGAGCCAACTCGAT
CGTCACCAAACCCGTACCACGGAACCACACAGCTGTGGGT
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