prot_H-elongata_contig80111.15669.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80111.15669.1
Unique Nameprot_H-elongata_contig80111.15669.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length252
Homology
BLAST of mRNA_H-elongata_contig80111.15669.1 vs. uniprot
Match: A0A6H5KYH6_9PHAE (Vps54_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH6_9PHAE)

HSP 1 Score: 279 bits (714), Expect = 4.200e-86
Identity = 177/264 (67.05%), Postives = 193/264 (73.11%), Query Frame = 0
Query:    1 ICLTVCLSARSNAFFEGLKTSQDLQMHVTGACTTLYQLRQEEAYRTGRESMSRMEQEVVAGPMRIPQLQRRRDNLAALEATLELVAGVQQSQAAIQAQQGLLAAEDYLGALDILQSAKSTVKNELGKLQSLKNVGRQLAEYEELVSELLSNRFVSLAVTTPVE----TGWEGGLIAAPEMTRDS-----ESWEM--------GFETENGRA-DTSGA-SGSRDELRRGLELVVQGLLRLGEMERVLGVVQERLSEDLKLIIRCV 245
            +CL   +S RS+AFFEGLKTSQDLQ HVTGACTTLYQL         RESM  ME++V+AGPMR+PQLQRRR NL++LEATLELVA VQQSQAAI+   GLLAAEDYLGALDILQSAKSTVKNELGKL SL+NVGRQL EYEELVS LLSNRFV+LAVT PV+    T   G         RD       SWE         G    NGR  D  GA S   DELRR LELVVQGLLRLGEMERVLG+VQ+R+SEDLKLIIR V
Sbjct:  317 VCLLKQISHRSDAFFEGLKTSQDLQTHVTGACTTLYQL---------RESMRCMEKDVLAGPMRVPQLQRRRSNLSSLEATLELVARVQQSQAAIE---GLLAAEDYLGALDILQSAKSTVKNELGKLHSLRNVGRQLKEYEELVSGLLSNRFVALAVTIPVDVVGSTAAGGAATGGSGNGRDDPAAGLSSWETAAAADHDGGDAATNGRGGDAGGAISAGGDELRRDLELVVQGLLRLGEMERVLGIVQDRVSEDLKLIIRTV 568          
BLAST of mRNA_H-elongata_contig80111.15669.1 vs. uniprot
Match: D7G0A0_ECTSI (Vacuolar protein sorting-associated protein 54 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A0_ECTSI)

HSP 1 Score: 278 bits (712), Expect = 3.550e-83
Identity = 176/266 (66.17%), Postives = 193/266 (72.56%), Query Frame = 0
Query:    1 ICLTVCLSARSNAFFEGLKTSQDLQMHVTGACTTLYQLRQEEAYRTGRESMSRMEQEVVAGPMRIPQLQRRRDNLAALEATLELVAGVQQSQAAIQAQQGLLAAEDYLGALDILQSAKSTVKNELGKLQSLKNVGRQLAEYEELVSELLSNRFVSLAVTTPVE-----------TGWEGGLIAAPEMTRDSESWEMGFET--ENGRADTSGASGSR--------DELRRGLELVVQGLLRLGEMERVLGVVQERLSEDLKLIIRCV 245
            +CL   +S RS+AFFEGLKTSQDLQ HVTGACTTLYQL         RESM  ME++V+AGPMR+PQLQRRR NL++LEATLELVA VQQSQAAI+   GLLAAEDYLGALDILQSAKSTVKNELGKL SL+NVGRQL EYEELVS LLSNRFV+LAVT PV+           TG  G     P       SWE    T  E G A T+G  G          DE+RR LELVVQGLLRLGEMERVLGVVQ+R+SEDLKLIIR V
Sbjct:  232 VCLLKQISHRSDAFFEGLKTSQDLQTHVTGACTTLYQL---------RESMRCMEKDVLAGPMRVPQLQRRRGNLSSLEATLELVARVQQSQAAIE---GLLAAEDYLGALDILQSAKSTVKNELGKLHSLRNVGRQLKEYEELVSGLLSNRFVALAVTIPVDVVGSAAAGGAATGGNGNGRGDP--ADGLSSWETAAATDREGGDAATNGRGGEAGGAISAGGDEMRRDLELVVQGLLRLGEMERVLGVVQDRVSEDLKLIIRTV 483          
BLAST of mRNA_H-elongata_contig80111.15669.1 vs. uniprot
Match: A0A835YJU9_9STRA (Vacuolar protein sorting-associated protein 54 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU9_9STRA)

HSP 1 Score: 134 bits (337), Expect = 4.200e-32
Identity = 92/240 (38.33%), Postives = 139/240 (57.92%), Query Frame = 0
Query:    7 LSARSNAFFEGLKTSQDLQMHVTGACTTLYQLRQEEAYRTGRESMSRMEQEVVAGPMRIPQLQRRRDNLAALEATLELVAGVQQSQAAIQAQQGLLAAEDYLGALDILQSAKSTVKNELGKLQSLKNVGRQLAEYEELVSELLSNRFVSLAV-TTPVETGWEGGLIAAPEMTRDSESWEMGFETENGRADTSGASGSRDELRRGLELVVQGLLRLGEMERVLGVVQERLSEDLKLIIRCV 245
            +SARS+AF EGL+T+  L+  V+ ACT++ QL         R +M+R+E EVV   +R+PQL +R+ NL +L+  LELV  +++S+ A++    LLAA+DY GALD+L+ A+  +  +L  +  L+   RQ++EYE+L   +L++R +S+A  T P E G  GG  A         +                      +L   L  VVQ + RLG++E+VL + +ERL EDLKLIIR V
Sbjct:  275 ISARSDAFLEGLETTHALRKVVSQACTSVQQL---------RAAMARIESEVVTKAIRVPQLAQRQQNLMSLQGYLELVQSIERSKLAVEP---LLAADDYSGALDVLEGARRALARDLSDMHCLRAASRQMSEYEDLAFAMLTSRLLSVAQHTRPGEAGGHGGDDAXXXXXXXXXA----------------------DLEAALVPVVQAVERLGKLEKVLDMFEERLLEDLKLIIRTV 480          
BLAST of mRNA_H-elongata_contig80111.15669.1 vs. uniprot
Match: A0A7S2BIV8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BIV8_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 5.280e-19
Identity = 61/160 (38.12%), Postives = 92/160 (57.50%), Query Frame = 0
Query:    1 ICLTVCLSARSNAFFEGLKTSQDLQMHVTGACTTLYQLRQEEAYRTGRESMSRMEQEVVAGPMRIPQLQRRRDNLAALEATLELVAGVQQSQAAIQAQQGLLAAEDYLGALDILQSAKSTVKNELGKLQSLKNVGRQLAEYEELVSELLSNRFVSLAVTT 160
            +CL   +S+R ++FFE L   QDLQ+ VT ACT +  L         R  +  M+Q +V+G M++PQL RR+ NL AL + LE V  V +++ A++A   L  AED+ GAL IL  A+      L  ++ +  + +QL EYE      L+ +FV++AV T
Sbjct:   35 VCLLRQISSRQDSFFEALSNLQDLQLDVTQACTKVNTL---------RRGVRGMQQNMVSGTMKVPQLARRKSNLNALHSVLEQVLKVLEAKDAVEA---LFKAEDFAGALSILTEARKMTSESLHNVRCVHVLDKQLMEYELSAIRFLATQFVNVAVDT 182          
BLAST of mRNA_H-elongata_contig80111.15669.1 vs. uniprot
Match: W5U8J1_ICTPU (Vacuolar protein sorting-associated protein 54 n=7 Tax=Siluroidei TaxID=1489793 RepID=W5U8J1_ICTPU)

HSP 1 Score: 67.4 bits (163), Expect = 3.940e-9
Identity = 44/149 (29.53%), Postives = 81/149 (54.36%), Query Frame = 0
Query:    7 LSARSNAFFEGLKTSQDLQMHVTGACTTLYQLRQEEAYRTGRESMSRMEQEVVAGPMRIPQLQRRRDNLAALEATLELVAGVQQSQAAIQAQQGLLAAEDYLGALDILQSAKSTVKNELGKLQSLKNVGRQLAEYEELVSELLSNRFVS 155
            +S RS AFF  + + ++LQ  +  A          +A R  RE  + M + ++ GP+R  +    R N   L   L+L+A VQQ+Q  +Q    LL+  +++GAL+++ + K  ++ EL  + S +++G QL E E+L+ +++   F +
Sbjct:  232 ISLRSEAFFHAMSSQRELQEQLCEAA---------DAVRALREHTAGMGRTMIRGPLRALRHTVTRRNCVTLHGKLKLMAAVQQTQPTVQL---LLSTSEFVGALELINTTKEVLQQELQGIHSFRHLGSQLCEMEKLIDKMMVADFTT 368          
BLAST of mRNA_H-elongata_contig80111.15669.1 vs. uniprot
Match: A0A553Q812_9TELE (Vacuolar protein sorting-associated protein 54 n=2 Tax=Danionella translucida TaxID=623744 RepID=A0A553Q812_9TELE)

HSP 1 Score: 67.0 bits (162), Expect = 5.310e-9
Identity = 46/151 (30.46%), Postives = 85/151 (56.29%), Query Frame = 0
Query:    7 LSARSNAFFEGLKTSQDLQMHVTGACTTLYQLRQEEAYRTGRESMSRMEQEVVAGPMRIPQLQRRRDNLAALEATLELVAGVQQSQAAIQAQQGLLAAEDYLGALDILQSAKSTVKNELGKLQSLKNVGRQLAEYEELVSELLSNRFVSLA 157
            +S RS+AFF  + +   LQ  ++    ++ +LR   A       + R+   +   P+R+ +  R R+N  AL+A L+L+A +QQ+Q  +Q    LLA  ++ GAL+++ ++K  ++ EL  + S +++G QL E E L+ +++   F S A
Sbjct:  237 ISLRSDAFFHAMSSQHQLQDRLSETADSVSRLRARTA------GIHRV---LCRAPLRVLRDVRSRNNCVALQAKLQLMAALQQTQPTVQL---LLAGGEFTGALELISTSKEVLQQELQGIHSFRHLGSQLCEMERLIDKMMVADFSSYA 375          
BLAST of mRNA_H-elongata_contig80111.15669.1 vs. uniprot
Match: UPI0019C61E13 (vacuolar protein sorting-associated protein 54 n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI0019C61E13)

HSP 1 Score: 67.0 bits (162), Expect = 5.320e-9
Identity = 45/149 (30.20%), Postives = 79/149 (53.02%), Query Frame = 0
Query:    7 LSARSNAFFEGLKTSQDLQMHVTGACTTLYQLRQEEAYRTGRESMSRMEQEVVAGPMRIPQLQRRRDNLAALEATLELVAGVQQSQAAIQAQQGLLAAEDYLGALDILQSAKSTVKNELGKLQSLKNVGRQLAEYEELVSELLSNRFVS 155
            +S RS AFF  + +  +LQ  +  A           A R  RE  + M + +  GP+R  +    R N  AL   L+L+A VQQ+Q  +Q    LL+  +++GAL+++ + K  ++ EL  + S +++G QL E E+L+ +++   F +
Sbjct:  232 ISLRSEAFFHAMSSQHELQEQLCEAAA---------AVRALREHTAGMGRTMCQGPLRALRHAVTRKNCVALHGKLKLMAAVQQTQPTVQL---LLSTSEFVGALELINTTKEVLQQELQGIHSFRHLGSQLCEMEKLIDKMMVADFTT 368          
BLAST of mRNA_H-elongata_contig80111.15669.1 vs. uniprot
Match: A0A3F2S2L8_9STRA (Vacuolar protein sorting-associated protein 54 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S2L8_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 9.440e-9
Identity = 53/244 (21.72%), Postives = 119/244 (48.77%), Query Frame = 0
Query:    7 LSARSNAFFEGLKTSQDLQMHVTGACTTLYQLRQEEAYRTGRESMSRMEQEVVAGPMRIPQLQRRRDNLAALEATLELVAGVQQSQAAIQAQQGLLAAEDYLGALDILQSAKSTVKNELGKLQSLKNVGRQLAEYEELVSELLSNRFVSLAVTTPVETGWEGGLIAAPEMTRDSESWEMGFETENGRADTSG-----ASGSRDELRRGLELVVQGLLRLGEMERVLGVVQERLSEDLKLIIRCV 245
            +S+RS+ FFE     + ++  +  AC  +  L         R++M R+   +    + I  L +R+  +  L   + +V  V+ +++A++A   L+  +DY GAL++++S+++ +++ L  +  L ++  +   Y   +S  +S RF+S              +I +PE       W    + E   AD SG     A+  +D +++  + +V  L RL  ++  +    ++L+E+++++++ V
Sbjct:  156 VSSRSDRFFEASADQEVMKQSIKVACDQVATL---------RKTMDRLRNLLADKTLDIVNLHQRQKRIKELHDLMAMVEEVKGAESAVEA---LVQCQDYTGALNLIESSQTILRDHLQGIHGLSSLSEKFRGYRAFISTQISQRFIS--------------VITSPE-------WTFHDDVEPSYADPSGKRKNSANNDKDNVQQETKCLVDVLFRLDALDNTVQTYLDQLNEEIRVVVKTV 366          
BLAST of mRNA_H-elongata_contig80111.15669.1 vs. uniprot
Match: A0A7K8X2L8_9PICI (VPS54 protein (Fragment) n=2 Tax=Ramphastidae TaxID=57381 RepID=A0A7K8X2L8_9PICI)

HSP 1 Score: 65.5 bits (158), Expect = 1.640e-8
Identity = 43/151 (28.48%), Postives = 83/151 (54.97%), Query Frame = 0
Query:    7 LSARSNAFFEGLKTSQDLQMHVTGACTTLYQLRQEEAYRTGRESMSRMEQEVVAGPMRIPQLQRRRDNLAALEATLELVAGVQQSQAAIQAQQGLLAAEDYLGALDILQSAKSTVKNELGKLQSLKNVGRQLAEYEELVSELLSNRFVSLA 157
            +S RS AFF  + +  +LQ ++          +  +A +  RE +S+++Q V  G +R+ +L   R N       L+L+A V Q+Q  +Q    LL+  +++GALD++ + +  ++ EL  + S +++G QL E E+L+ +++   F + A
Sbjct:  224 ISLRSEAFFHAMTSQHELQDYLR---------KTSQAVKLLREKISKIDQVVCEGSLRVLRLSLTRSNCIKAYNKLKLMATVHQTQPMVQL---LLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFAAYA 362          
BLAST of mRNA_H-elongata_contig80111.15669.1 vs. uniprot
Match: A0A7K6AKZ6_UPUEP (Vacuolar protein sorting-associated protein 54 (Fragment) n=1 Tax=Upupa epops TaxID=57439 RepID=A0A7K6AKZ6_UPUEP)

HSP 1 Score: 64.3 bits (155), Expect = 4.260e-8
Identity = 42/151 (27.81%), Postives = 84/151 (55.63%), Query Frame = 0
Query:    7 LSARSNAFFEGLKTSQDLQMHVTGACTTLYQLRQEEAYRTGRESMSRMEQEVVAGPMRIPQLQRRRDNLAALEATLELVAGVQQSQAAIQAQQGLLAAEDYLGALDILQSAKSTVKNELGKLQSLKNVGRQLAEYEELVSELLSNRFVSLA 157
            +S RS AFF  + +  +LQ ++          +  +A +  RE +S+++Q +  G +R+ +L   R+N       L+L+A V Q+Q  +Q    LL+  +++GALD++ + +  ++ EL  + S +++G QL E E+L+ +++   F + A
Sbjct:  224 ISLRSEAFFHAMTSQHELQDYLR---------KTSQAVKLLREKISKIDQVMCEGSLRVLRLSLTRNNCIKAYNKLKLMATVHQTQPTVQL---LLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFSTYA 362          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80111.15669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5KYH6_9PHAE4.200e-8667.05Vps54_N domain-containing protein n=1 Tax=Ectocarp... [more]
D7G0A0_ECTSI3.550e-8366.17Vacuolar protein sorting-associated protein 54 n=1... [more]
A0A835YJU9_9STRA4.200e-3238.33Vacuolar protein sorting-associated protein 54 (Fr... [more]
A0A7S2BIV8_9STRA5.280e-1938.13Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
W5U8J1_ICTPU3.940e-929.53Vacuolar protein sorting-associated protein 54 n=7... [more]
A0A553Q812_9TELE5.310e-930.46Vacuolar protein sorting-associated protein 54 n=2... [more]
UPI0019C61E135.320e-930.20vacuolar protein sorting-associated protein 54 n=1... [more]
A0A3F2S2L8_9STRA9.440e-921.72Vacuolar protein sorting-associated protein 54 n=3... [more]
A0A7K8X2L8_9PICI1.640e-828.48VPS54 protein (Fragment) n=2 Tax=Ramphastidae TaxI... [more]
A0A7K6AKZ6_UPUEP4.260e-827.81Vacuolar protein sorting-associated protein 54 (Fr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 131..151
IPR039745Vacuolar protein sorting-associated protein 54PANTHERPTHR12965VACUOLAR PROTEIN SORTING 54coord: 3..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80111contigH-elongata_contig80111:477..2728 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80111.15669.1mRNA_H-elongata_contig80111.15669.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80111 477..2728 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80111.15669.1 ID=prot_H-elongata_contig80111.15669.1|Name=mRNA_H-elongata_contig80111.15669.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=252bp
ICLTVCLSARSNAFFEGLKTSQDLQMHVTGACTTLYQLRQEEAYRTGRES
MSRMEQEVVAGPMRIPQLQRRRDNLAALEATLELVAGVQQSQAAIQAQQG
LLAAEDYLGALDILQSAKSTVKNELGKLQSLKNVGRQLAEYEELVSELLS
NRFVSLAVTTPVETGWEGGLIAAPEMTRDSESWEMGFETENGRADTSGAS
GSRDELRRGLELVVQGLLRLGEMERVLGVVQERLSEDLKLIIRCVPVYCV
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039745Vps54