prot_H-elongata_contig8008.15667.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8008.15667.1
Unique Nameprot_H-elongata_contig8008.15667.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length504
Homology
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BLAST of mRNA_H-elongata_contig8008.15667.1 vs. uniprot
Match: D8LU72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU72_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 3.320e-30
Identity = 154/487 (31.62%), Postives = 207/487 (42.51%), Query Frame = 0 
Query:    1 RFTGDAICALACNNSGASQLLAGGAMPILADL--PNFPPHNIGTCVGGEQPIVGERH------------------LVDVCAQALALLTKAKGEFVRQALITPKIVALVLEALYLGGGGDXXXXXXXXXX--------KNNKAARRCRLSGASALVTIFSGAEPSQIVSLLQVGFLVKAEYFLHQAETFQDWKAQELLTYSVWHATLTLTEARPPIRPHPPNPLGELTTTPSGD----------ILALKTKVRQGRKSSFAST------------------------VAGNEEPLTGTLTRNLPGIRNRKGSSGGSSVVG-SESDVGSLSGGLDRIIRATAEAKSGGSTKSRGNPWKSRNL-SVRISPPHDGIAGGRVPLINREIDVSRGTSQRLGGDKQGPTMRKGSTDQGSLG--GGLPEMLEAGAPLVESRMFRRDDATDKCLLQVPHVVACGIMARLLRLAEFGATDFTR---HEACCMGALCN 418
            R+TG AICAL  N  GASQLLAGG + ILA+L  PN    +  +  G ++   G+                    L++  A A + LT A  EFVRQALI P  VA VLE LYLGG G XXXXXXXX          + NK A  CRL+ A  L +IFS A+ S +  L+Q+GFL K   F  QA   +D KAQ+LL +SVWH + TLT+ +P     PP         P  D          I AL     Q  +  +                                                       SSVV  S S+  ++     R  RA+         +++G+    +N     +S    G+ GGR  L+           + L          + S+ +G +G  GG+P  L +G  L ++     D +  +   + PHVVACG+M  LLRLAE G T F R   H+    GA+ N
Sbjct:  262 RYTGQAICALGANKHGASQLLAGGVLTILANLSKPNNLTRDCESASGHDEGSGGDXXXXXXMGREGNPAAAADGLLLEAFAHAASNLTVANAEFVRQALIAPATVAEVLEILYLGGDGGXXXXXXXXVGAMKSNANVRGNKRAAACRLNSARVLRSIFSEADASDVARLVQLGFLRKTGQFFGQAAAQKDPKAQQLLAHSVWHLSATLTDVKPLESQPPPXXXXXXXXXPPTDSGSPAFTGEAISALSMGGLQQHQQQYKGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVVSVSVSEANTV-----RSSRASVRPVD----RAKGSMILRQNFPGGALSAARGGLVGGRK-LVRXXXXXXXXXXESLS---------ETSSHRGGVGLEGGVPSALGSGLSL-DTTSGAADSSPSEVDEKGPHVVACGVMHHLLRLAESGTTGFVRQGSHKQAQEGAVRN 728
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8008.15667.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LU72_ECTSI3.320e-3031.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8008contigH-elongata_contig8008:1459..6198 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8008.15667.1mRNA_H-elongata_contig8008.15667.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8008 1459..6198 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8008.15667.1 ID=prot_H-elongata_contig8008.15667.1|Name=mRNA_H-elongata_contig8008.15667.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=504bp
RFTGDAICALACNNSGASQLLAGGAMPILADLPNFPPHNIGTCVGGEQPI
VGERHLVDVCAQALALLTKAKGEFVRQALITPKIVALVLEALYLGGGGDG
GEGTEGITGKNNKAARRCRLSGASALVTIFSGAEPSQIVSLLQVGFLVKA
EYFLHQAETFQDWKAQELLTYSVWHATLTLTEARPPIRPHPPNPLGELTT
TPSGDILALKTKVRQGRKSSFASTVAGNEEPLTGTLTRNLPGIRNRKGSS
GGSSVVGSESDVGSLSGGLDRIIRATAEAKSGGSTKSRGNPWKSRNLSVR
ISPPHDGIAGGRVPLINREIDVSRGTSQRLGGDKQGPTMRKGSTDQGSLG
GGLPEMLEAGAPLVESRMFRRDDATDKCLLQVPHVVACGIMARLLRLAEF
GATDFTRHEACCMGALCNLARKTWISTRILKDVCLLKTLLNGIRASLTRI
EGRTSILAAKGVWNIIARMAQDRPFIVDCVESGVVGSICGATKGAADLLK
AIEE
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