mRNA_H-elongata_contig80065.15666.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig80065.15666.1
Unique NamemRNA_H-elongata_contig80065.15666.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig80065.15666.1 vs. uniprot
Match: A0A6H5L4W2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4W2_9PHAE)

HSP 1 Score: 410 bits (1053), Expect = 1.270e-135
Identity = 231/402 (57.46%), Postives = 284/402 (70.65%), Query Frame = 1
Query:    1 VDMTPIAEAAARCGVLLWEDCAQIFTGLHGYLGHPKSDAVFFSFGVIKRATAFGGGVARISDVAVMSDMLREEADYPMQSTTAYLRRVLKCFLLLACTSPLIYGLIVHFLRLMGVDHDKLAIKISKGFPKKGLLKAIRHRPSIPLVQMLAWRITRYTPEGVETRLRHCNRMLSVLEAALVLRNQD------------------------GKGAKGSALLRANDVLPGIQAHRHTLWLYPVMVKGRAEGAADRLVDALVREGFDATRSPTSLVPIDRCSTSELTKCPQGAIDPPSSSLIPKCSSMMDSLVYLPLANNIPDSEVDRMALVLARAL---SDTSFP-----DQAGRLSPGGEWRGAHGARGRAAV-RSILAFACRSDAVALS-ICISALYVLFAFL 1104
            VDMT I EAAAR G+LLWEDCAQ+FTGL GYLGHP SDA FFSFGVIKRATAFGGG+ARI D  V+  MLREEA+YP QS  AYLRRVLKC+L+LA T+PL+YG+I+H L ++G++HD++ +K+SKGFPKKGL++AIRHR SIPL+QMLAWRI+RY  EGVE RLRHCNRMLSVLEAAL  R +                         G+G          DVLPG++A+RHTLWLYPVMV G  + A+  +V  L+REGFDATR+PTSL+PI+RC+T++  K P   +   S    P+CS+MMDSLVYLPLANNIPDSEVDRMAL LAR+L     ++ P     D  G  + G      +G+R R A+ RS++AFA R D +A+S +C   L V F  L
Sbjct:  236 VDMTHIVEAAARHGLLLWEDCAQMFTGLGGYLGHPDSDAAFFSFGVIKRATAFGGGIARIRDDQVLRPMLREEAEYPSQSAAAYLRRVLKCWLMLALTTPLLYGIILHTLAVLGIEHDEVVMKLSKGFPKKGLMRAIRHRASIPLLQMLAWRISRYPTEGVEIRLRHCNRMLSVLEAALSQRQRQPQPPRALPARGGGAAQEDPSALSVGEGXXXXXXXXVGDVLPGVKAYRHTLWLYPVMVTGGPDRAS-YVVRDLLREGFDATRAPTSLMPIERCTTTKY-KGPADGVSSSSPCRTPRCSAMMDSLVYLPLANNIPDSEVDRMALALARSLWSCGSSAAPGDGRLDSCGSPASGPRKSRGNGSRERTALARSLVAFAFRLDVIAVSTLCFMVLAVSFVIL 635          
BLAST of mRNA_H-elongata_contig80065.15666.1 vs. uniprot
Match: A0A537CG90_9PROT (DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537CG90_9PROT)

HSP 1 Score: 144 bits (364), Expect = 8.230e-36
Identity = 103/315 (32.70%), Postives = 156/315 (49.52%), Query Frame = 1
Query:    7 MTPIAEAAARCGVLLWEDCAQIFTGLHGYLGHPKSDAVFFSFGVIKRATAFGGGVARISDVAVMSDMLREEADYPMQSTTAYLRRVLKCFLLLACTSPLIYGLIVHFLRLMGVDHDKLAIKISKGFPKKGLLKAIRHRPSIPLVQMLAWRITRYTPEGVETRLRHCNRMLSVLEAALVLRNQDGKGAKGSALLRANDVLPGIQAHRHTLWLYPVMVKGRAEGAADRLVDALVREGFDATRSPTSLVPIDRCSTSELTKCPQGAIDPPSSSLIPKCSSMMDSLVYLPLANNIPDSEVDRMALVLARALSDTSFPDQ 951
            M PI E + R G+L++EDCAQ F+G  GY G+P+SD   FSFG IK ATA GG + R+ D  + + M   + +Y  QS  AYLR++ KC  L   +  L Y L V     + + HD +  + ++ F    L +AIRHRPS  L+ +L  R+TR+    +  R         V  A + + +  G               PG +A  HT W++PV       G+ +RL+  L + GFDATR  +SL  +           P  A DP  ++   +   +MDS+VYLP+   +   ++ R+  V++     T   D+
Sbjct:  130 MEPIVEVSQRHGLLVFEDCAQAFSG-DGYRGYPESDVSMFSFGPIKTATALGGALLRVRDADLRNTMQAVQLNYRPQSQWAYLRKLFKCAALKLLSGRLPYTLFVAGCAALRISHDAVIGRAARSFAGLDLFRAIRHRPSRALLLLLRRRLTRFDTRTIAGR---------VAAARVAVDHMPGIDR------------PGGRAAFHTHWVFPVR-----SGSPNRLMRRLWQAGFDATRGASSLYVV-----------PPPAADPGLAAA--EAVRVMDSVVYLPVHAGVAKRDLARLGRVISEFHGATPLADE 404          
BLAST of mRNA_H-elongata_contig80065.15666.1 vs. uniprot
Match: UPI0019FC8CB6 (DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Chloroflexi bacterium AL-N15 TaxID=2686370 RepID=UPI0019FC8CB6)

HSP 1 Score: 144 bits (364), Expect = 8.370e-36
Identity = 99/306 (32.35%), Postives = 150/306 (49.02%), Query Frame = 1
Query:    1 VDMTPIAEAAARCGVLLWEDCAQIFTGLHGYLGHPKSDAVFFSFGVIKRATAFGGGVARISDVAVMSDMLREEADYPMQSTTAYLRRVLKCFLLLACTSPLIYGLIVHFLRLMGVDHDKLAIKISKGFPKKGLLKAIRHRPSIPLVQMLAWRITRYTPEGVETRLRHCNRMLSVLEAALVLRNQDGKGAKGSALLRANDVLPGIQAHRHTLWLYPVMVKGRAEGAADRLVDALVREGFDATRSPTSLVPIDRCSTSEL-TKCPQGAIDPPSSSLIPKCSSMMDSLVYLPLANNIPDSEVDRMALVL 915
            +D+ PIA  A R G+LL +DCAQ + G   YLGH  SD V FSFG IK  TA GG V    D  ++S M +  A YP Q    +  RV+   LL   T P I  L     R  G+D+D+L  +  + F    L++ IRH+P +PL+++LA R+      G++ R+    R+   L A                        PG+QA  HT W+ P++         +++   L +EGFDATRS +SL  +     +EL T  P  A D            +M+ ++Y+P+ + + D+++ R+  V+
Sbjct:  141 MDLKPIAAIAQRHGLLLMKDCAQAYAGSE-YLGHSTSDVVMFSFGPIKTQTALGGAVLHFRDPTLLSRMRQLHATYPCQPKCPFWHRVVLFMLLRLLTRPPILQLFARVCRWRGIDYDQLLSQNLRSFSGGNLIEHIRHQPCVPLLRLLARRLRNKQASGIKQRMALVQRLTPYLSA---------------------HYCPGLQALCHTHWVIPILTT-----QPEQIARRLQQEGFDATRSASSLAVVS--PPAELFTAIPHQAAD------------LMEHVMYVPVYSAMTDADIQRLVHVI 405          
BLAST of mRNA_H-elongata_contig80065.15666.1 vs. uniprot
Match: A0A7X7F430_9BACT (DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7X7F430_9BACT)

HSP 1 Score: 140 bits (352), Expect = 4.610e-34
Identity = 96/308 (31.17%), Postives = 150/308 (48.70%), Query Frame = 1
Query:    1 VDMTPIAEAAARCGVLLWEDCAQIFTGLHGYLGHPKSDAVFFSFGVIKRATAFGGGVARISDVAVMSDMLREEADYPMQSTTAYLRRVLKCFLLLACTSPLIYGLIVHFLRLMGVDHDKLAIKISKGFPKKGLLKAIRHRPSIPLVQMLAWRITRYTPEGVETRLRHCNRMLSVLEAALVLRNQDGKGAKGSALLRANDVLPGIQAHRHTLWLYPVMVKGRAEGAADRLVDALVREGFDATRSPTSLVPIDRCSTSELTKCPQGAIDPPSS--SLIPK-CSSMMDSLVYLPLANNIPDSEVDRMALVL 915
            + + PI E A + G+L+ EDCAQ F G H + GH  +D   FSFG IK ATAFGGGV R+ D  ++S M    A+YP+QS  +YL+R  K  +L   +   +   I+   R  G D+D+    + + FP    L  +RH+PS PL+ +L  R++ +    +  R    NRM  ++         DG             + P + A  H+ W++P++         DR+V AL + GFDATR  +                   A++PP+    L P     ++  +++LPL   +P  E++RM  +L
Sbjct:  128 IPIEPILEIARQHGLLVIEDCAQAFAGCH-FDGHAGADVSMFSFGPIKTATAFGGGVFRVGDPRILSRMESLHAEYPVQSRGSYLKRFAKYSVLKGMSCRPLRDAILAVYRAAGFDYDRWISGVVRAFPGPKWLDRLRHQPSAPLLSLLERRLSTFDETWLAARTARGNRMARLMP--------DGA------------MRPAMNASEHSYWVFPILAD-----EPDRVVAALAQAGFDATRRSSLR-----------------AVEPPADRPELDPHHARDILSRMIFLPLCPEMPRREMERMGKIL 392          
BLAST of mRNA_H-elongata_contig80065.15666.1 vs. uniprot
Match: A0A523MR06_9BACT (DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A523MR06_9BACT)

HSP 1 Score: 137 bits (346), Expect = 3.070e-33
Identity = 104/323 (32.20%), Postives = 153/323 (47.37%), Query Frame = 1
Query:    1 VDMTPIAEAAARCGVLLWEDCAQIFTGLHGYLGHPKSDAVFFSFGVIKRATAFGGGVARISDVAVMSDMLREEADYPMQSTTAYLRRVLKCFLLLACTSPLIYGLIVHFLRLMGVDHDKLAIKISKGFPKKGLLKAIRHRPSIPLVQMLAWRITRYTPEGVETRLRHCNRMLSVLEAALVLRNQDGKGAKGSALLR---ANDVLPGIQAHRHTLWLYPVMVKGRAEGAADRLVDALVREGFDATRSPTSLVPIDRCSTSELTKCPQGAIDPPSSSLIPKCSSMMDSLVYLPLANNIPDSEVDRMALVLA----RALSDTSFPD 948
            +D+ PI   A   G+++ EDCAQ F G  GY GHP SD   FSFG IK ATAFGGG+ R+ D  +++ M + + +Y +Q T AY  R+LK  +L A +  ++YG ++  LR +GVDHD+L  ++++GF        IR RP + L++ML  R+        E  +R   R++                  G AL R   A    PG     H  W++P++          RL+ AL   GFDAT   +  V  +   +        GA D        +   ++   VYLP    +     +RMA VL+    R +S   F D
Sbjct:  129 LDVEPIVAFARTRGLMVIEDCAQAFAG-PGYTGHPDSDVAMFSFGPIKTATAFGGGLLRVRDANLLARMRQRQQEYAVQPTGAYAARLLKYAVLHAVSGQVMYGTVLALLRAVGVDHDRLVHRLTRGFSGPEFFARIRRRPCVALLRMLHRRLR-------EDHVRLARRIVD-----------------GDALQRRLGATVTCPGGSLTPHHYWVFPILAP-----EPKRLIRALREAGFDATEGRSFDVVQNPLGS--------GAHD------TTQAKDILSHAVYLPFYPEMSRRGWERMAQVLSDDIVRDVSPVDFRD 407          
BLAST of mRNA_H-elongata_contig80065.15666.1 vs. uniprot
Match: A0A1Z4RJ66_9CYAN (Pleiotropic regulatory protein homolog n=1 Tax=Calothrix sp. NIES-4101 TaxID=2005461 RepID=A0A1Z4RJ66_9CYAN)

HSP 1 Score: 137 bits (345), Expect = 6.140e-33
Identity = 95/310 (30.65%), Postives = 152/310 (49.03%), Query Frame = 1
Query:    1 VDMTPIAEAAARCGVLLWEDCAQIFTGLHGYLGHPKSDAVFFSFGVIKRATAFGGGVARISDVAVMSDMLREEADYPMQSTTAYLRRVLKCFLLLACTSPLIYGLIVHFLRLMGVDHDKLAIKISKGFPKKGLLKAIRHRPSIPLVQMLAWRITRYTPEGVETRLRHCNRMLSVLEAALVLRNQDGKGAKGSALLRANDVLPGIQAHRHTLWLYPVMVKGRAEGAADRLVDALVREGFDATRSPTSLVPIDRCSTSELTKCPQGAIDPPSSSLIPKCSSMMDSLVYLPLANNIPDSEVDRMALVLARALS 930
            +D+ P  E   +  ++L EDCAQ F G   Y GHP++D  FFSFG IK +TA GGGVA   D      +   +  YP +S   +  RV K  LL   + P+IY L++  L++   D D      ++GF +  LL  +R++P   L+  LA+R++R   +    R++     L++++          K  K       N  +PGI A  H+ WL+P++V        + L+  L    FD TR  TSL              P+ +    S   I     +M  +++LP+++ +P +E++R+A VLAR L+
Sbjct:  163 IDLQPYVEFCQKYNLILIEDCAQAFAGKK-YYGHPQADVSFFSFGAIKSSTALGGGVAVFKDRKQAEKIEYLQQQYPRKSELWFFVRVGKFILLKTLSIPVIYYLLLQILQIFKKDLDATINATTRGFSQGNLLTKLRYQPPHHLIWFLAYRLSRC--DNFSARIQTAEYFLAIIK----------KNIK-------NMKIPGIDASYHSYWLFPILVAN-----PESLMVKLRSHNFDVTRGTTSLT------------VPEASAHQCSHLQIDNAQYLMKHVLFLPISHQVPTTELERLANVLARELN 435          
BLAST of mRNA_H-elongata_contig80065.15666.1 vs. uniprot
Match: A0A7C5BZV4_9BACT (DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5BZV4_9BACT)

HSP 1 Score: 136 bits (342), Expect = 1.010e-32
Identity = 100/312 (32.05%), Postives = 143/312 (45.83%), Query Frame = 1
Query:    1 VDMTPIAEAAARCGVLLWEDCAQIFTGLHGYLGHPKSDAVFFSFGVIKRATAFGGGVARISDVAVMSDMLREEADYPMQSTTAYLRRVLKCFLLLACTSPLIYGLIVHFLRLMGVDHDKLAIKISKGFPKKGLLKAIRHRPSIPLVQMLAWRITRYTPEGVETRLRHCNRMLSVLEAALVLRNQDGKGAKGSALLRANDVLPGIQAHRHTLWLYPVMVKGRAEGAADRLVDALVREGFDATRSPTSLVPIDRCSTSELTKCPQGAIDPPSSSLIPKCSSMMDSLVYLPLANNIPDSEVDRMALVLARALSDT 936
            V M PI   A   G+L+ EDCAQ ++GLH Y GHP++D   FSFG IK ATA GG + RI +  + + M   E  +P+QS   YL+R+LK         P+ + L V   RLMG D+D++     +GFP     + IRHR   PL+ +L  R+ RY    +  R                      KG     LL  +   PG +A   T W++P++V          +   L + GFDA R+ +  V         +   P     PP    + +   ++  LV LP+   IPD  + RMA V+  A   T
Sbjct:  128 VRMEPILRWAKENGLLVIEDCAQAYSGLH-YRGHPEADVSMFSFGSIKTATALGGALFRIRNPQLAARMRAVEERWPVQSRLKYLQRLLKYAWFSVVCRPVPFALFVSTCRLMGYDYDQIIHSAVRGFPGSDWREKIRHRACAPLLLLLLRRLKRYDMARLAQRA--------------------AKGEMLLDLLSQHVFCPGAKAENRTHWVFPILVDDPVA-----VTSRLQQAGFDAARTHSLTV---------IEAPPNHPASPP----LAESKRLLQQLVCLPIYPEIPDRAIRRMANVVLEAYRPT 400          
BLAST of mRNA_H-elongata_contig80065.15666.1 vs. uniprot
Match: A0A355F2Z0_9BACT (Aminotransferase DegT n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A355F2Z0_9BACT)

HSP 1 Score: 134 bits (336), Expect = 5.950e-32
Identity = 95/308 (30.84%), Postives = 148/308 (48.05%), Query Frame = 1
Query:    7 MTPIAEAAARCGVLLWEDCAQIFTGLHGYLGHPKSDAVFFSFGVIKRATAFGGGVARISDVAVMSDMLREEADYPMQSTTAYLRRVLKCFLLLACTSPLIYGLIVHFLRLMGVDHDKLAIKISKGFPKKGLLKAIRHRPSIPLVQMLAWRITRYTPEGVETRLRHCNRMLSVLEAALVLRNQDGKGAKGSALLRANDVLPGIQAHRHTLWLYPVMVKGRAEGAADRLVDALVREGFDATRSPTSLVPIDRCSTSELTKCPQGAIDPPSS--SLIP-KCSSMMDSLVYLPLANNIPDSEVDRMALVLAR 921
            + P+ + A   G+ + ED AQ F  L   L  P++D   +SFG IK  TA  GG+    D  ++  + R +  +P +S  ++L R+LK  +L+A T P +Y L V   RL G  HD +    ++GFP  G L+ IRHRPS PL+ +LA R+ R+ P  +  R     + +    AA+    +                 PG +A RHT W++P++ +         LV+ L ++GFDATR  +SL                  + PP+    L P +    M+ L+YLP+   +P     R+A  LA+
Sbjct:  130 LEPVLDVARAHGLFVVEDGAQAFASLDA-LAPPQADVSLWSFGPIKTTTALAGGLLCFRDPRLLEQVRRHQDGWPERSRWSFLFRLLKYSVLMALTWPPLYTLFVALCRLAGKSHDAVISANTRGFPGDGFLQQIRHRPSTPLLALLARRLQRFDPAAIAARTAAAEQAM----AAMPFLER-----------------PGDRAARHTHWVFPILNENPVA-----LVNTLWKQGFDATRGASSL----------------HVVGPPADRPELAPVEAERTMERLLYLPVYPEVPQRTAGRLATALAK 394          
BLAST of mRNA_H-elongata_contig80065.15666.1 vs. uniprot
Match: W4FK79_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FK79_9STRA)

HSP 1 Score: 132 bits (332), Expect = 3.280e-31
Identity = 98/301 (32.56%), Postives = 147/301 (48.84%), Query Frame = 1
Query:   43 VLLWEDCAQIFTGLHGYLGHPKSDAVFFSFGVIKRATAFGGGVARISDVAVMSDMLREEADYPMQSTTAYLRRVLKCFLLLACTSPLIYGLIVHFLRLMGVDHDKLAIKISKGFPKKGLLKAIRHRPSIPLVQMLAWRITRYTPEGVETRLRHCNRMLSVLEAALVLRNQDGKGAKGSALLRA--NDVLPGIQAHRHTLWLYPVMVKGRAEGAADRLVDALVREGFDATRSPTSLVPIDRCSTSELTKCPQGAIDPPSSSLIPKCSS-MMDSLVYLPLANNIPDSEVDRMALVLARALSDT 936
            +LL EDCAQ + G   Y GH  +D   FSFG IK +TAFGGG+ R+SD A++  M      Y  +S   +L R+LK  +L + T+P ++GL  H +  +G   D++     +GF    L+  IR RPS+PL+ +L                    R L+  + A V + +  K  +   LLR   +  +PG+ A  H  WL+PV+V      AA     A++++GFD T   T L  +                 P  +S  P  S  +M SLVYLP+   +P   +++MA  LA A++ T
Sbjct:  163 ILLLEDCAQAYCG-PAYTGHRATDVALFSFGTIKTSTAFGGGMLRVSDRAILRKMRSINNSYEPRSRKFFLHRLLKYSVLHSLTTPAMFGLFFHVVSKLGYSADEVITSQIRGFAGD-LISGIRQRPSMPLLFLL-------------------RRKLTTFDMAYVAKRKT-KSEELEQLLRGIPHTSVPGVLAKNHYYWLFPVLVPHPRHVAA-----AMIQDGFDVTAGATQLAFVPH---------------PTDASFDPVISKKVMQSLVYLPVTAEMPRWALEKMAKSLAAAVAST 421          
BLAST of mRNA_H-elongata_contig80065.15666.1 vs. uniprot
Match: A0A6F9DIA0_9ASCI (Uncharacterized protein LOC100184344 n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DIA0_9ASCI)

HSP 1 Score: 132 bits (332), Expect = 3.700e-31
Identity = 97/316 (30.70%), Postives = 151/316 (47.78%), Query Frame = 1
Query:    4 DMTPIAEAAARCGVLLWEDCAQIFTGLHGYLGHPKSDAVFFSFGVIKRATAFGGGVARISDVAVMSDMLREEADYPMQSTTAYLRRVLKCFLLLACTS-PLIYGLIVHFLRLMGVDHDKLAIKISKGFPKKGLLKAIRHRPSIPLVQMLAWRITRYTPEGVETRLRHCNRMLSVLEAALVLRNQDGKGAKGSALLRANDVLP------GIQAHRHTLWLYPVMVKGRAEGAADRLVDALVREGFDATRSPTSLVPI--DRCSTSELTKCPQGAIDPPSSSLIPKCSSMMDSLVYLPLANNIPDSEVDRMALVLARA 924
            DM P+ +   +  + + EDCA+ F+GL  Y GHP+SD  FFSFGVIK ATAFGG + +I++  +  +M    A YP+Q    Y ++++K  ++ +C + P I    V   R++G+DH ++ + + +GFP  G  K IR RPS  L+  L  ++T ++   + T  R                       KG  L+R    LP      G +A     WL+P++V+   +         L   G DATR  T L  +  D          P+          +P    +MD +VYLP    +P SE+D++ + L RA
Sbjct:  144 DMQPVVKICKKHNLCILEDCAEAFSGLK-YKGHPESDLAFFSFGVIKFATAFGGSIVKINNKVLYKEMCALHATYPIQPHMEYAKKLVKYSIMTSCFNCPAIVRWGVSAFRMIGIDHKEIFVPMLRGFPT-GFFKNIRRRPSTALLNNLVLKLTDFSENEILTAKR-----------------------KGDYLVRQ---LPKEVTALGQEAVTVNYWLFPILVEQPVQ-----FTQCLFDFGVDATRGTTQLQMVLSDVGDDKSAQSTPE--------EWLPHTKFIMDHVVYLPCHKLVPYSELDKIIVALHRA 418          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80065.15666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4W2_9PHAE1.270e-13557.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A537CG90_9PROT8.230e-3632.70DegT/DnrJ/EryC1/StrS aminotransferase family prote... [more]
UPI0019FC8CB68.370e-3632.35DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Chlo... [more]
A0A7X7F430_9BACT4.610e-3431.17DegT/DnrJ/EryC1/StrS aminotransferase family prote... [more]
A0A523MR06_9BACT3.070e-3332.20DegT/DnrJ/EryC1/StrS aminotransferase family prote... [more]
A0A1Z4RJ66_9CYAN6.140e-3330.65Pleiotropic regulatory protein homolog n=1 Tax=Cal... [more]
A0A7C5BZV4_9BACT1.010e-3232.05DegT/DnrJ/EryC1/StrS aminotransferase family prote... [more]
A0A355F2Z0_9BACT5.950e-3230.84Aminotransferase DegT n=1 Tax=Acidobacteria bacter... [more]
W4FK79_9STRA3.280e-3132.56Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A6F9DIA0_9ASCI3.700e-3130.70Uncharacterized protein LOC100184344 n=1 Tax=Phall... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80065contigH-elongata_contig80065:158..2712 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score367.9
Seed ortholog evalue5.8e-99
Seed eggNOG ortholog2880.D8LSA1
EggNOG free text desc.DegT/DnrJ/EryC1/StrS aminotransferase family
EggNOG OGs2RN8Q@2759,COG0399@1
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPyridoxal phosphate-dependent transferase
Ec32 orthologEc-12_004290.1
Exons6
Model size1119
Cds size1113
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931207.0308495-CDS-H-elongata_contig80065:157..3771622931207.0308495-CDS-H-elongata_contig80065:157..377Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80065 158..377 -
1691679741.5827022-CDS-H-elongata_contig80065:157..3771691679741.5827022-CDS-H-elongata_contig80065:157..377Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80065 158..377 -
1622931207.0471752-CDS-H-elongata_contig80065:542..6861622931207.0471752-CDS-H-elongata_contig80065:542..686Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80065 543..686 -
1691679741.598329-CDS-H-elongata_contig80065:542..6861691679741.598329-CDS-H-elongata_contig80065:542..686Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80065 543..686 -
1622931207.0635126-CDS-H-elongata_contig80065:1095..14091622931207.0635126-CDS-H-elongata_contig80065:1095..1409Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80065 1096..1409 -
1691679741.6086051-CDS-H-elongata_contig80065:1095..14091691679741.6086051-CDS-H-elongata_contig80065:1095..1409Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80065 1096..1409 -
1622931207.0776377-CDS-H-elongata_contig80065:1671..17551622931207.0776377-CDS-H-elongata_contig80065:1671..1755Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80065 1672..1755 -
1691679741.6180687-CDS-H-elongata_contig80065:1671..17551691679741.6180687-CDS-H-elongata_contig80065:1671..1755Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80065 1672..1755 -
1622931207.0925074-CDS-H-elongata_contig80065:1995..21501622931207.0925074-CDS-H-elongata_contig80065:1995..2150Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80065 1996..2150 -
1691679741.6275008-CDS-H-elongata_contig80065:1995..21501691679741.6275008-CDS-H-elongata_contig80065:1995..2150Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80065 1996..2150 -
1622931207.1082404-CDS-H-elongata_contig80065:2510..27061622931207.1082404-CDS-H-elongata_contig80065:2510..2706Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80065 2511..2706 -
1691679741.6378684-CDS-H-elongata_contig80065:2510..27061691679741.6378684-CDS-H-elongata_contig80065:2510..2706Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80065 2511..2706 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931207.1210768-UTR-H-elongata_contig80065:2706..27121622931207.1210768-UTR-H-elongata_contig80065:2706..2712Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig80065 2707..2712 -
1691679741.6499414-UTR-H-elongata_contig80065:2706..27121691679741.6499414-UTR-H-elongata_contig80065:2706..2712Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig80065 2707..2712 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80065.15666.1prot_H-elongata_contig80065.15666.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig80065 158..2706 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig80065.15666.1

>prot_H-elongata_contig80065.15666.1 ID=prot_H-elongata_contig80065.15666.1|Name=mRNA_H-elongata_contig80065.15666.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=371bp
MTPIAEAAARCGVLLWEDCAQIFTGLHGYLGHPKSDAVFFSFGVIKRATA
FGGGVARISDVAVMSDMLREEADYPMQSTTAYLRRVLKCFLLLACTSPLI
YGLIVHFLRLMGVDHDKLAIKISKGFPKKGLLKAIRHRPSIPLVQMLAWR
ITRYTPEGVETRLRHCNRMLSVLEAALVLRNQDGKGAKGSALLRANDVLP
GIQAHRHTLWLYPVMVKGRAEGAADRLVDALVREGFDATRSPTSLVPIDR
CSTSELTKCPQGAIDPPSSSLIPKCSSMMDSLVYLPLANNIPDSEVDRMA
LVLARALSDTSFPDQAGRLSPGGEWRGAHGARGRAAVRSILAFACRSDAV
ALSICISALYVLFAFLAPMF*
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mRNA from alignment at H-elongata_contig80065:158..2712-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig80065.15666.1 ID=mRNA_H-elongata_contig80065.15666.1|Name=mRNA_H-elongata_contig80065.15666.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2555bp|location=Sequence derived from alignment at H-elongata_contig80065:158..2712- (Himanthalia elongata Himel1 dioecious)
GTAGACATGACACCGATTGCGGAGGCGGCGGCGCGTTGTGGCGTTCTCTT GTGGGAGGACTGTGCCCAAATTTTCACGGGGCTGCATGGCTACCTCGGTC ATCCCAAGAGCGACGCCGTGTTTTTCAGCTTTGGTGTCATCAAGAGGGCA ACCGCCTTTGGGGGCGGCGTCGCGCGCATTAGCGATGTGGCGGTCATGTC AGGTGTGGATGAGGTCGGGAAGGCGTGTCATGACTCGATCGATATTCACC CATGCTAAGGATTACCACGCTTACCGCGTAGTAACAAACAAATATACACA CACATATGCACGATTGGAAACCAGAGAGATCGCGAGTACTTTGGCGGCAT CACCAACGACTATTTTGCTAAAGGTGAGCGACTTGACCGGCTCATTTCCA ACATTTAGTCGTATAACATCGAGTTGAGCTGGTTTGGCCACGGGCACTAT TTTTTTTCGAGGCGATTCTATATCTGGGCCGTAAGGGTTACCTCGACCTA ATTCACAGTATCGGTTCCCTTCTCCGCCCGTCTGCGCCTTCGCGAATGCG GTATCACTTCAGACATGCTGCGCGAGGAAGCCGACTACCCAATGCAGTCC ACGACGGCATACCTGCGGCGGGTGTTAAAATGCTTCCTACTGCTCGCTTG TACCTCGCCGCTGATTTATGGTTTGATCGTACATTTCCTAAGGCTGATGG GCGTCGACCACGACAAGGTACACGGGCGGGGGCATCATTCTGCCGGGGAT TTATGCTAAAATGGCGTTTGGGTGTCGAGGGGAAAACGATGTTCGACCTT CAAACGATCGCGCGGGAGGTCGATTTTTTAAATTGTAGCCATCCTGCGCC AATGATACCTCCTGCTGTCGCCGCGAAGTCAACTTGCGCATCTTTTCAGC GTATGCTGTAGTGTCTCGAATGCGCGCCGTGTCCATATCGGCTGTTGTTC AAAGCAGTTGGCCATCAAGATTAGCAAGGGGTTCCCAAAGAAGGGGTTGC TGAAGGCGATCAGGCATCGACCTTCGATTCCGCTGGTCCAGGTGCATTCA GTTGCTTCTCTTGTTCCTTAGGAGTTGAGTTGCATCAAAAGAGAAGCTCT CTGTCATGACTAGCGTATCGCACCGAGGCACTCCTCTCCTTGCTCCATTA ATGAAATGACGGGATCTCGTAACTCGGGGGACATCGTCTCACGGAAAACC CCACCCCCTCCGAATCTAACGGTACCATTTTTTTGAAGGGAGAAATAATT ATATCTGTCTCTCGAGTTACTTTCTGATTCCTGCCGTGTTTTGTGTTCGG CAGATGCTCGCATGGAGGATAACCCGCTACACCCCAGAAGGCGTTGAAAC TCGTCTTAGACATTGTAATCGTATGCTAAGCGTTCTTGAGGCTGCTCTAG TGCTACGGAATCAGGACGGGAAGGGAGCCAAGGGGTCGGCGCTTTTACGC GCCAACGACGTTTTGCCAGGGATACAAGCCCACCGACACACCCTCTGGCT GTACCCAGTCATGGTTAAAGGGAGGGCGGAAGGAGCAGCAGACCGCCTGG TTGATGCCCTTGTGAGGGAGGGATTCGACGCAACACGATCGCCGACATCG TTGGTGCCTATCGATCGGTGAGACCTGTCAATTTATATTGCTCAATATCC TTTTGTAAACTATTGAAGATGTCATTCCAGCGATGTTGCTCCGCCAGCGA GAGCTTGTCCGGTGCTGCAGCAAGGTAAACCAGTCTGGCATTTGGAGGCA ATCTGGTCGTTCACCCTACAAGACCCGTCGCGGTGTCAGTTAGTGCATAC AGCGTGTGTTATTGTGAGCATCTTTCCCGTGCCGCGCGTGACATGAAGAC GAGTTAACTGAATAGATTATCGTGATAAAGCAAGAAAAGTTCATTTTGTT ATGCCCCCTCCTACAATAGTAATGAAATGCATAATATCCTCCTTCTGTTT TTATTTTTAAAAGTATGAACTCATTAAAACCCTCCGAATATCCACGCCTT CTGATCGCGTTTCGGTGCGGAGCTAGGTGCTCTACCTCAGAACTGACAAA GTGTCCTCAAGGCGCGATTGATCCGCCGTCATCCTCCCTTATTCCGAAAT GTTCATCGATGATGGACTCTCTGGTCTATCTGCCTCTAGCGAACAACATT CCAGACTCGGAAGTGGACAGGTGAGGGGTGCCACCCGGACAACCGCATGG AGGGCAAATGTAATGCAAAGGTACACCATCCAATTGCGTAGCACCGCTGA GGTAACGTCCACGTCACCGGACACAAAGAGACTGTACGCTGCCTCTTCTG TTGCGTTATGGTCCCCGTTCGATCCCGTGCGACAGAATGGCGCTGGTTCT GGCGAGGGCTTTGTCCGACACCTCTTTTCCTGACCAGGCGGGTCGACTCA GCCCAGGAGGAGAATGGCGAGGAGCGCACGGCGCACGAGGTCGAGCTGCT GTGCGAAGCATCCTCGCGTTTGCCTGTCGCTCGGATGCCGTTGCTCTGTC AATCTGTATATCGGCACTATATGTGCTTTTCGCCTTTCTCGCACCGATGT TCTGA
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Coding sequence (CDS) from alignment at H-elongata_contig80065:158..2712-

>mRNA_H-elongata_contig80065.15666.1 ID=mRNA_H-elongata_contig80065.15666.1|Name=mRNA_H-elongata_contig80065.15666.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2226bp|location=Sequence derived from alignment at H-elongata_contig80065:158..2712- (Himanthalia elongata Himel1 dioecious)
ATGACACCGATTGCGGAGGCGGCGGCGCGTTGTGGCGTTCTCTTGTGGGA
GGACTGTGCCCAAATTTTCACGGGGCTGCATGGCTACCTCGGTCATCCCA
AGAGCGACGCCGTGTTTTTCAGCTTTGGTGTCATCAAGAGGGCAACCGCC
TTTGGGGGCGGCGTCGCGCGCATTAGCGATGTGGCGGTCATGTCAGATGA
CACCGATTGCGGAGGCGGCGGCGCGTTGTGGCGTTCTCTTGTGGGAGGAC
TGTGCCCAAATTTTCACGGGGCTGCATGGCTACCTCGGTCATCCCAAGAG
CGACGCCGTGTTTTTCAGCTTTGGTGTCATCAAGAGGGCAACCGCCTTTG
GGGGCGGCGTCGCGCGCATTAGCGATGTGGCGGTCATGTCAGACATGCTG
CGCGAGGAAGCCGACTACCCAATGCAGTCCACGACGGCATACCTGCGGCG
GGTGTTAAAATGCTTCCTACTGCTCGCTTGTACCTCGCCGCTGATTTATG
GTTTGATCGTACATTTCCTAAGGCTGATGGGCGTCGACCACGACAAGACA
TGCTGCGCGAGGAAGCCGACTACCCAATGCAGTCCACGACGGCATACCTG
CGGCGGGTGTTAAAATGCTTCCTACTGCTCGCTTGTACCTCGCCGCTGAT
TTATGGTTTGATCGTACATTTCCTAAGGCTGATGGGCGTCGACCACGACA
AGTTGGCCATCAAGATTAGCAAGGGGTTCCCAAAGAAGGGGTTGCTGAAG
GCGATCAGGCATCGACCTTCGATTCCGCTGGTCCAGTTGGCCATCAAGAT
TAGCAAGGGGTTCCCAAAGAAGGGGTTGCTGAAGGCGATCAGGCATCGAC
CTTCGATTCCGCTGGTCCAGATGCTCGCATGGAGGATAACCCGCTACACC
CCAGAAGGCGTTGAAACTCGTCTTAGACATTGTAATCGTATGCTAAGCGT
TCTTGAGGCTGCTCTAGTGCTACGGAATCAGGACGGGAAGGGAGCCAAGG
GGTCGGCGCTTTTACGCGCCAACGACGTTTTGCCAGGGATACAAGCCCAC
CGACACACCCTCTGGCTGTACCCAGTCATGGTTAAAGGGAGGGCGGAAGG
AGCAGCAGACCGCCTGGTTGATGCCCTTGTGAGGGAGGGATTCGACGCAA
CACGATCGCCGACATCGTTGGTGCCTATCGATCGATGCTCGCATGGAGGA
TAACCCGCTACACCCCAGAAGGCGTTGAAACTCGTCTTAGACATTGTAAT
CGTATGCTAAGCGTTCTTGAGGCTGCTCTAGTGCTACGGAATCAGGACGG
GAAGGGAGCCAAGGGGTCGGCGCTTTTACGCGCCAACGACGTTTTGCCAG
GGATACAAGCCCACCGACACACCCTCTGGCTGTACCCAGTCATGGTTAAA
GGGAGGGCGGAAGGAGCAGCAGACCGCCTGGTTGATGCCCTTGTGAGGGA
GGGATTCGACGCAACACGATCGCCGACATCGTTGGTGCCTATCGATCGGT
GCTCTACCTCAGAACTGACAAAGTGTCCTCAAGGCGCGATTGATCCGCCG
TCATCCTCCCTTATTCCGAAATGTTCATCGATGATGGACTCTCTGGTCTA
TCTGCCTCTAGCGAACAACATTCCAGACTCGGAAGTGGACAGGTGCTCTA
CCTCAGAACTGACAAAGTGTCCTCAAGGCGCGATTGATCCGCCGTCATCC
TCCCTTATTCCGAAATGTTCATCGATGATGGACTCTCTGGTCTATCTGCC
TCTAGCGAACAACATTCCAGACTCGGAAGTGGACAGAATGGCGCTGGTTC
TGGCGAGGGCTTTGTCCGACACCTCTTTTCCTGACCAGGCGGGTCGACTC
AGCCCAGGAGGAGAATGGCGAGGAGCGCACGGCGCACGAGGTCGAGCTGC
TGTGCGAAGCATCCTCGCGTTTGCCTGTCGCTCGGATGCCGTTGCTCTGT
CAATCTGTATATCGGCACTATATGTGCTTTTCGCCTTTCTCGCACCGATG
TTCTGAAATGGCGCTGGTTCTGGCGAGGGCTTTGTCCGACACCTCTTTTC
CTGACCAGGCGGGTCGACTCAGCCCAGGAGGAGAATGGCGAGGAGCGCAC
GGCGCACGAGGTCGAGCTGCTGTGCGAAGCATCCTCGCGTTTGCCTGTCG
CTCGGATGCCGTTGCTCTGTCAATCTGTATATCGGCACTATATGTGCTTT
TCGCCTTTCTCGCACCGATGTTCTGA
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