mRNA_H-elongata_contig80064.15665.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig80064.15665.1 vs. uniprot
Match: D7FYV7_ECTSI (Anaphase-promoting complex subunit 10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYV7_ECTSI) HSP 1 Score: 209 bits (533), Expect = 7.590e-67 Identity = 104/119 (87.39%), Postives = 109/119 (91.60%), Query Frame = 1
Query: 22 DGGQPHLINIQFHKKMTVVEIAFFLDFTSDESYTPKKLSIRAGSSFHDLVEVTIKDLHEPVGWVRVPLTMPTGGGAAAAADVAAGGTDRPVLRAHFVQICVVAMHQNGRDTHIRQVRHF 378
DGGQPHLINIQFHKKMTVVEIAF LDF+SDESYTPKKLSIRAGSSFHDLVEVT+K+LHEPVGWVRVPL P GGGAAA A AAGG + PVLRAHFVQICVVAMHQNGRDTHIRQV+ F
Sbjct: 64 DGGQPHLINIQFHKKMTVVEIAFHLDFSSDESYTPKKLSIRAGSSFHDLVEVTVKELHEPVGWVRVPLFAPGGGGAAAIAADAAGGAEGPVLRAHFVQICVVAMHQNGRDTHIRQVKVF 182
BLAST of mRNA_H-elongata_contig80064.15665.1 vs. uniprot
Match: F0XYN0_AURAN (Anaphase-promoting complex subunit 10 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYN0_AURAN) HSP 1 Score: 149 bits (377), Expect = 2.240e-43 Identity = 72/119 (60.50%), Postives = 87/119 (73.11%), Query Frame = 1
Query: 22 DGGQPHLINIQFHKKMTVVEIAFFLDFTSDESYTPKKLSIRAGSSFHDLVEVTIKDLHEPVGWVRVPLTMPTGGGAAAAADVAAGGTDRPVLRAHFVQICVVAMHQNGRDTHIRQVRHF 378
DGGQPHLINIQFHKKM++ E+AF+LD+ DESYTPKK+SIRAG++FHDLVEV + DLHEP GWV V L+ D LRA F+Q+CVV+MHQNGRDTH+RQ + F
Sbjct: 63 DGGQPHLINIQFHKKMSISEMAFYLDYGLDESYTPKKMSIRAGTTFHDLVEVEVVDLHEPTGWVTVALSH----------------GDGKALRAFFLQVCVVSMHQNGRDTHVRQAKIF 165
BLAST of mRNA_H-elongata_contig80064.15665.1 vs. uniprot
Match: W7U0V1_9STRA (Anaphase-promoting complex, subunit 10/DOC domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0V1_9STRA) HSP 1 Score: 147 bits (371), Expect = 3.960e-42 Identity = 69/120 (57.50%), Postives = 90/120 (75.00%), Query Frame = 1
Query: 22 DGGQPHLINIQFHKKMTVVEIAFFLDFTSDESYTPKKLSIRAGSSFHDLVEVTIKDLHEPVGWVRVPLTMPTG---GGAAAAADVAAGGTDRPVLRAHFVQICVVAMHQNGRDTHIRQVR 372
DG QPHLIN+QFHKKMT++E++ +LD++ DESYTPKK+SI+AG++FHDLVE+ +L EP GWV+VP+ P G D AG VLRA F+QI ++AMHQNGRDTH+RQV+
Sbjct: 58 DGAQPHLINVQFHKKMTILEVSLYLDYSLDESYTPKKISIKAGTTFHDLVEIQTVNLKEPQGWVKVPVRNPYADRPSGVDTVGDATAGDPVGGVLRAFFLQISIIAMHQNGRDTHVRQVK 177
BLAST of mRNA_H-elongata_contig80064.15665.1 vs. uniprot
Match: A0A1W0A3Z8_9STRA (Anaphase-promoting complex subunit 10 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A3Z8_9STRA) HSP 1 Score: 137 bits (345), Expect = 9.080e-39 Identity = 69/119 (57.98%), Postives = 87/119 (73.11%), Query Frame = 1
Query: 22 DGGQPHLINIQFHKKMTVVEIAFFLDFTSDESYTPKKLSIRAGSSFHDLVEVTIKDLHEPVGWVRVPLTMPTGGGAAAAADVAAGGTDRPVLRAHFVQICVVAMHQNGRDTHIRQVRHF 378
DG QPHLINIQF KKMTV EIA +LD DESYTP+K+SIRAGS+FHDLVE+ + + EP+GW+ + L P + +A G+++P LR F+QI V+ MHQNGRDTHIRQV+ F
Sbjct: 38 DGVQPHLINIQFAKKMTVQEIAMYLDHKLDESYTPRKISIRAGSTFHDLVEIKTQTIVEPMGWITIQLMQPP-------SHIANAGSEKP-LRTFFLQIAVMGMHQNGRDTHIRQVKVF 148
BLAST of mRNA_H-elongata_contig80064.15665.1 vs. uniprot
Match: A0A485KIW7_9STRA (Anaphase-promoting complex subunit 10 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KIW7_9STRA) HSP 1 Score: 136 bits (342), Expect = 2.590e-38 Identity = 70/119 (58.82%), Postives = 84/119 (70.59%), Query Frame = 1
Query: 22 DGGQPHLINIQFHKKMTVVEIAFFLDFTSDESYTPKKLSIRAGSSFHDLVEVTIKDLHEPVGWVRVPLTMPTGGGAAAAADVAAGGTDRPVLRAHFVQICVVAMHQNGRDTHIRQVRHF 378
DG QPHLINIQFHKKMT+ E+A +LD+ DESYTPK L IRAG++FHDLV++ + EP GWV +PLT GAAA ++P LR F+QI V MHQNGRDTHIRQV+ F
Sbjct: 38 DGPQPHLINIQFHKKMTIREVALYLDYKLDESYTPKMLMIRAGTTFHDLVDIKAHTIAEPNGWVTIPLTQTVVSGAAA--------FEKP-LRTFFLQISVTGMHQNGRDTHIRQVKVF 147
BLAST of mRNA_H-elongata_contig80064.15665.1 vs. uniprot
Match: A0A7S0RL68_9CHLO (Anaphase-promoting complex subunit 10 n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RL68_9CHLO) HSP 1 Score: 134 bits (338), Expect = 1.140e-37 Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 1
Query: 22 DGGQPHLINIQFHKKMTVVEIAFFLDFTSDESYTPKKLSIRAGSSFHDLVEVTIKDLHEPVGWVRVPLTMPTGGGAAAAADVAAGGTDRPVLRAHFVQICVVAMHQNGRDTHIRQVR 372
DGGQPHLINIQF KK+ + E+ + DF DESYTP KLSIRAG+SFHDL E+ + DL EPVGW+ PLT G+++ +RA+FVQ+ V++ HQNGRDTHIRQV+
Sbjct: 46 DGGQPHLINIQFQKKVRLKELEIYADFKQDESYTPNKLSIRAGNSFHDLREIRVVDLEEPVGWMSFPLTP--------------DGSNQEYMRAYFVQLAVLSNHQNGRDTHIRQVK 148
BLAST of mRNA_H-elongata_contig80064.15665.1 vs. uniprot
Match: K3WX17_GLOUD (Anaphase-promoting complex subunit 10 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WX17_GLOUD) HSP 1 Score: 133 bits (334), Expect = 4.090e-37 Identity = 65/117 (55.56%), Postives = 80/117 (68.38%), Query Frame = 1
Query: 22 DGGQPHLINIQFHKKMTVVEIAFFLDFTSDESYTPKKLSIRAGSSFHDLVEVTIKDLHEPVGWVRVPLTMPTGGGAAAAADVAAGGTDRPVLRAHFVQICVVAMHQNGRDTHIRQVR 372
DG QPHLIN+QFHKKM + EIA +LD+ DESYTPKK+SIR GS+ HDL E+ + L EP GWV +PLT A+ D L+ F+QI ++AMHQNGRDTHIRQV+
Sbjct: 42 DGSQPHLINVQFHKKMALKEIALYLDYKLDESYTPKKISIRCGSTVHDLKEIYAQSLAEPNGWVTIPLT-------------ASDDDDETPLQTFFLQIAIIAMHQNGRDTHIRQVK 145
BLAST of mRNA_H-elongata_contig80064.15665.1 vs. uniprot
Match: A0A0M0J4G7_9EUKA (Anaphase-promoting complex subunit 10-like protein (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J4G7_9EUKA) HSP 1 Score: 131 bits (330), Expect = 3.170e-36 Identity = 66/118 (55.93%), Postives = 83/118 (70.34%), Query Frame = 1
Query: 22 DGGQPHLINIQFHKKMTVVEIAFFLDFTSDESYTPKKLSIRAGSSFHDLVEVTIKDLHEPVGWVRVPLTMPTGGGAAAAADVAAGGTDRPV-LRAHFVQICVVAMHQNGRDTHIRQVR 372
DG QPHLINIQFHKKM V EI + DF DESYTP K+SIR G++FHDL E+ +++L+EP GWV + +PT V + G D LRAHF+Q+ V+A HQNGRDTHIRQ++
Sbjct: 62 DGPQPHLINIQFHKKMRVHEIVIYTDFKLDESYTPSKISIRVGNTFHDLQEIHVQELNEPSGWVTI---LPT--------SVTSRGDDPDAALRAHFIQVAVLANHQNGRDTHIRQIK 168
BLAST of mRNA_H-elongata_contig80064.15665.1 vs. uniprot
Match: A0A067CDF0_SAPPC (Anaphase-promoting complex subunit 10 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CDF0_SAPPC) HSP 1 Score: 130 bits (328), Expect = 3.410e-36 Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 1
Query: 22 DGGQPHLINIQFHKKMTVVEIAFFLDFTSDESYTPKKLSIRAGSSFHDLVEVTIKDLHEPVGWVRVPLTMPTGGGAAAAADVAAGGTDRPV-LRAHFVQICVVAMHQNGRDTHIRQVR 372
DG QPHLINIQFHKKMTV E+A +LD+ DESYTP+K++IRAGS+FHDLV++ + + EP GW +PL A +A G R LR F+QI V+ MHQNGRDTHIRQV+
Sbjct: 38 DGVQPHLINIQFHKKMTVHEVALYLDYKLDESYTPRKIAIRAGSTFHDLVDIKTQTIVEPSGWTVIPLQQ---------ALLALGQPSREKPLRTFFLQIAVLGMHQNGRDTHIRQVK 146
BLAST of mRNA_H-elongata_contig80064.15665.1 vs. uniprot
Match: A0A1V9YB90_9STRA (Anaphase-promoting complex subunit 10 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YB90_9STRA) HSP 1 Score: 130 bits (328), Expect = 3.410e-36 Identity = 65/117 (55.56%), Postives = 83/117 (70.94%), Query Frame = 1
Query: 22 DGGQPHLINIQFHKKMTVVEIAFFLDFTSDESYTPKKLSIRAGSSFHDLVEVTIKDLHEPVGWVRVPLTMPTGGGAAAAADVAAGGTDRPVLRAHFVQICVVAMHQNGRDTHIRQVR 372
DG QPHLINIQF KKMTV E+A +LD+ DESYTP+K+SIRAG+++HDL E+ + + EP GW+ + LT P A + D+P LR F+QI V+ MHQNGRDTHIRQV+
Sbjct: 38 DGVQPHLINIQFPKKMTVQEVALYLDYKLDESYTPRKISIRAGTTYHDLTEIKTQTIVEPAGWITIQLTHP-------APLLTDSNRDKP-LRTFFLQIAVMGMHQNGRDTHIRQVK 146 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80064.15665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig80064.15665.1 >prot_H-elongata_contig80064.15665.1 ID=prot_H-elongata_contig80064.15665.1|Name=mRNA_H-elongata_contig80064.15665.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=126bp MIDHSSIDGGQPHLINIQFHKKMTVVEIAFFLDFTSDESYTPKKLSIRAGback to top mRNA from alignment at H-elongata_contig80064:1393..2470- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig80064.15665.1 ID=mRNA_H-elongata_contig80064.15665.1|Name=mRNA_H-elongata_contig80064.15665.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1078bp|location=Sequence derived from alignment at H-elongata_contig80064:1393..2470- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig80064:1393..2470- >mRNA_H-elongata_contig80064.15665.1 ID=mRNA_H-elongata_contig80064.15665.1|Name=mRNA_H-elongata_contig80064.15665.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=756bp|location=Sequence derived from alignment at H-elongata_contig80064:1393..2470- (Himanthalia elongata Himel1 dioecious)back to top |