mRNA_H-elongata_contig80059.15663.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig80059.15663.1
Unique NamemRNA_H-elongata_contig80059.15663.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: D7FQ34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ34_ECTSI)

HSP 1 Score: 448 bits (1153), Expect = 2.530e-147
Identity = 243/396 (61.36%), Postives = 292/396 (73.74%), Query Frame = 1
Query:   58 MVAGGYSSEQ----CSPSDGGTVGASQEG----TVEGVDTSPLKYYPPREIYEVDEIALREALAGAERSSKENAHGVASFRLSGLLDQSCQLISAYD--KLKVMTGLSSTASPAKSD-TGVAPKLKIRSEICPSKRREIPKGGVEDWHLSEEERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRTLQEGSAEGTGPATEELRPFMRAAFVVEYERGGALLREITAAMDQINGQALKDIQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNGEAYRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQLLQV 1212
            MV+GGY  E      SP D   + A+ +     T  G + +P+K   PR+IYEVDE+ LREA+A A  + K NAHGVASF  SGLLDQS QL+ AY   K K+    S+  S   S  T VAP+LK+R+EIC  KRREIPKGGVEDWHLS+EER VR PGAYL+AG+++G+R     LSL +      PLRTL+EGSAE TGPATEE RPF RA FV+EYE GGAL R++TAAMD ING+AL +IQGSLRAY L+PEEK+  ++G LDIVCGFM+ID DSRT+VLEG  G    L+ LL++V R  PNG+AYRALEN +VRFS+R+YTCF+ DLKKVRLRDPLP LC NPEIY+RSKVSADCFD LH L+MLR+V R+ EAAE  LFP   QL+QV
Sbjct:    1 MVSGGYPEEDDACDSSPGDASQIKANTDSGEADTCAGQEPTPVKCAGPRDIYEVDELVLREAIAEAGSAGKHNAHGVASFHFSGLLDQSRQLVMAYSNSKRKLEDDASTATSAVPSAITDVAPRLKMRTEICQRKRREIPKGGVEDWHLSDEERFVRWPGAYLEAGSSVGVR-----LSLAR------PLRTLEEGSAERTGPATEEPRPFSRAVFVMEYEEGGALTRDVTAAMDHINGRALNNIQGSLRAYVLSPEEKQAANDGALDIVCGFMIIDEDSRTMVLEGLSGPQGGLTALLKKVGRTRPNGQAYRALENPEVRFSRRMYTCFDADLKKVRLRDPLPTLCQNPEIYDRSKVSADCFDALHCLRMLRKVDRLREAAEQGLFPEGAQLIQV 385          
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: A0A6H5JK05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK05_9PHAE)

HSP 1 Score: 385 bits (990), Expect = 2.930e-127
Identity = 210/331 (63.44%), Postives = 247/331 (74.62%), Query Frame = 1
Query:  229 AERSSKENAHGVASFRLSGLLDQSCQLISAYDKLKV-MTGLSSTASPA--KSDTGVAPKLKIRSEICPSKRREIPKGGVEDWHLSEEERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRTLQEGSAEGTGPATEELRPFMRAAFVVEYERGGALLREITAAMDQINGQALKDIQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNGEAYRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQLLQV 1212
            A  + K NAHGVASF LSGLLDQS QL+ AY   K  +   +STA+ A   + T VAP+LK+R+EIC  KRREIP+GGVEDWHL++EER VR PGA                LSL +      PLRTL+EGSAE TGPATEE RPF RA FVVEYE GGAL R++TAAMD ING+AL +I+GSLRAY L+PEEK+  D+G LDIVCGFM+ID  SRT+VLEG  G    L+ LL++V R GPNG+AYRALEN +VRFS+R+YTCF+ DLKKVRLRDPLP LC NPEIY+RSKVSADCFD LH L+MLR+V R+ EAAE  LFP   QL+QV
Sbjct:    2 AGSAGKHNAHGVASFHLSGLLDQSRQLVMAYSNSKRRLEDDASTATSALPSAITDVAPRLKMRAEICQRKRREIPRGGVEDWHLTDEERFVRWPGA----------------LSLAR------PLRTLEEGSAERTGPATEEPRPFSRAIFVVEYEEGGALTRDVTAAMDSINGRALNNIRGSLRAYVLSPEEKQAADDGALDIVCGFMIIDDCSRTMVLEGLCGPQGGLTALLKKVGRTGPNGQAYRALENPEVRFSRRMYTCFDADLKKVRLRDPLPTLCQNPEIYDRSKVSADCFDALHCLRMLRKVDRLREAAEQGLFPEGAQLIQV 310          
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: A0A836CB85_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB85_9STRA)

HSP 1 Score: 185 bits (469), Expect = 6.780e-48
Identity = 117/280 (41.79%), Postives = 157/280 (56.07%), Query Frame = 1
Query:  385 VAPKLKIRSEICPSKRREIPKGGVEDWHLSEEERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRTLQEGSAEGTGPATEELRPFMRAAFVVEYERGGALLREITAAMDQIN----GQALKDIQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNGEAYRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQLLQV 1212
            +A  L + +++C S R   P             RL R PG YL+AG  LG+R      SL + + P                    E RPF RAAFV EY   GAL+  + AA+D +N    G AL+    SLRAY L+  E+   D G LD+VCGF V+DA  RT+V+EG   ++  ++ LL RV R   NG AYR L + +VRF++R YT FN DLK+VRLR PLP LC  P++Y+R++VSA CF  L +L+ LRR + +  A +  LFP A  LL+V
Sbjct:  162 LAAALHLSADVCASARGAPPSAXXXXXXXX---RLSRAPGRYLEAGCALGVRA-----SLARPLAPYA------------------ETRPFTRAAFVFEYG-DGALVAALGAALDAVNAAALGGALRASGCSLRAYCLSAAERAAADAGALDVVCGFAVVDAHCRTVVVEGL--ADGGVAALLARVPRRARNGGAYRVLADPRVRFARRAYTAFNADLKRVRLRAPLPALCEGPDVYSRARVSAQCFAALDALRQLRRAASLRHARDCRLFPDAAALLEV 412          
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: T0RJV8_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RJV8_SAPDV)

HSP 1 Score: 179 bits (455), Expect = 6.570e-46
Identity = 125/350 (35.71%), Postives = 183/350 (52.29%), Query Frame = 1
Query:  175 PREIYEVDEIALREALA-GAERSSKENAHGVASFRLSGLLDQSCQLISAYDKLKVMTGLSSTASPAKSDTGVAPKLKIRSEICPSKRREIPKGGVEDWH--LSEEERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRTLQEGSAEGTGPATEELRPFMRAAFVVEYERGGALLREITAAMDQINGQALKDIQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNGE-AYRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQLLQV 1212
            P +I+ VD+IA  +      +++   N+HGVA+FR   LL+                          S  G   +LK  ++I   KRR+ PK G +D    LS+ E+LVR+PGAYL   +TL +     F  L     P                PA++    F R   VV Y+   ++ + ++ AM+++NG AL      LR+Y+LTP +K+  D G L+I+ GF V+D D R IVLEG   +  +++     + R GPN +  YR   N  VRFS+RLY  F+ DLK+++LRDPLP +   PE+Y RSKVS +CF  L+ LQ +R+ SR+ E  +  LFP    LL+V
Sbjct:  350 PLDIFVVDDIAKADIQTLFFQQAGDRNSHGVATFRFYELLN--------------------ATHLRPSSEGPFLQLKFAADIVQHKRRQPPKEGTDDAEDDLSQVEKLVRVPGAYLSHNSTLHLDATLAFPLLKPTRRP------------SLVAPASDNRSLFSRLVLVVPYDDTESV-QAVSRAMEKVNGAALPGAP--LRSYQLTPTQKQAADAGELNILTGFQVLDTDLRMIVLEGLAEAGMAVAHAS--IPRRGPNAQDGYRMFANHDVRFSQRLYAAFDVDLKRIKLRDPLPDIIKRPELYMRSKVSENCFQALNRLQDVRKASRLVELRDLDLFPLVSMLLEV 662          
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: A0A8J2S3F3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S3F3_9STRA)

HSP 1 Score: 174 bits (441), Expect = 4.890e-44
Identity = 125/353 (35.41%), Postives = 185/353 (52.41%), Query Frame = 1
Query:  184 IYEVDEIALREALAGAERSSKENAHGVASFRLSGLLDQSCQLISAYDKLKVMTGLSSTASPAKSDTGVAPKLKIRSEICPSKRREIPKGGVEDWHLSEEERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRTLQEGSA------EGT-----------------GPATEELRPFMRAAFVVEYERGGALLREITAAMDQINGQALKD-IQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNGEAYRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAA 1170
            + EVD++      A   +   ++AHG A  R+  LL+ S  L  A+ +           +  K D  V P ++  +++   KRR  PKGGV+DW L+E +RL    G Y DA + +G+            +  + PLR+LQEG        EGT                 G ++E   PF R A +  Y + G LL ++  AMD IN + L   + GSL +++L+PEE +  ++G LDIV G+ VID   RTIVLEG      S++++ + V R   N ++YR L +  VRF++R+YT FN DLKK+RLR+PLP+L  +P+IYN  KV+   F  L  L  LRR   + + A
Sbjct:  405 LEEVDQLFRLALTASWCKCGDDHAHGQADIRVDALLENSAALARAFAR----------NNKTKPDA-VRPLVESSADVTGRKRRITPKGGVDDWRLNEAQRLCVKTGMYSDANSVVGVS-----------VGLQRPLRSLQEGCFVDGCFWEGTLGDQPFATQNSKGKIFRGASSEA--PFGRLAIMFPY-KDGELLGKLLEAMDAINHRTLSSTMPGSLVSHQLSPEEVEAAESGELDIVSGWHVIDPACRTIVLEGLA---DSIAEIADAVPRDAINDDSYRLLADPTVRFTQRVYTQFNVDLKKIRLREPLPLLAESPDIYNPVKVATGAFTALDRLVQLRRSPSLRQLA 729          
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: A0A7S1U4M0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4M0_9STRA)

HSP 1 Score: 173 bits (438), Expect = 5.370e-44
Identity = 111/279 (39.78%), Postives = 150/279 (53.76%), Query Frame = 1
Query:  391 PKLKIRSEICPSKRREIPKGGVEDWHLSEEERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRTLQEGSAEGTGPATEELRPFMRAAFVVEYERGGALLREITAAMDQINGQALKDI-----QGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNGEAYRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQLLQV 1212
            P+ K R  I P+KRR  PK G+ DW LSE ERLVR PG Y +  A L       F ++  +     P   L E           ELR F RA FV  Y   G LL ++ A ++++N  AL        +GSL     T EE +  + G+LD+VCGF +ID D R IV+EG   +  ++ K+ E + R   N   YR L N  VRF +R+YT +N DLKK+RLR+ LP+L   P++YN +K+   C   L  L+ +RR   M EAA   LFP A+ L +V
Sbjct:   52 PQQKGRVSIAPAKRRITPKTGLSDWSLSEGERLVRQPGRYYETDAAL-------FTTVGLWR----PQMVLGE---------EVELRNFARACFVFGYGDSG-LLADVLAKLNEVNTAALGGPDELAKRGSLNTISFTEEEIERANAGLLDVVCGFEIIDEDCRMIVIEGLAAA--AMKKIEEEIPRLAANNPDYRVLSNVDVRFKERMYTSYNADLKKIRLREALPLLADMPDLYNSAKIDMACAIALVQLEEMRRADSMQEAAYLDLFPTAEHLSEV 307          
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: A0A833T8R7_PHYIN (Uncharacterized protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T8R7_PHYIN)

HSP 1 Score: 171 bits (432), Expect = 4.860e-43
Identity = 130/373 (34.85%), Postives = 192/373 (51.47%), Query Frame = 1
Query:  145 VDTSPLKYYPPREIYEVDEIALREALAGAERSSKENAHGVASFRLSGLLDQSCQLISAYDKLKVMTGLSSTASPAKSDTGVAPKLKIRSEICPSKRREIPKGGVEDWHLSEE------------ERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRTLQEGSAEGTGPATEELR----PFMRAAFVVEYERGGALLREITAAMDQINGQALKDIQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNG-EAYRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQLLQV 1212
            V  SP     P E+ EVD+IA  +       S +   +G+A+FRL+ LL+ + Q          M G+      A SD      LK+ S++   KRR  P G      LSEE            E+++R PGAY+  GA+L I  E            + P+  L  GSA+   PA+ E       F R   ++ Y +  + L E+T AM  +N +AL  +   +R+Y++T  EK D + G LD+V G  +ID+  R ++LEG    +K +  L ++++R GPN  +  R   N ++RF++RLYT F  DLK+++LR PL VL T P+IY RSKVSA+C   L  L  +R+V R+ E     LFP +Q L +V
Sbjct:   92 VGNSPTTTAQPMELTEVDDIARSDWRMMLANSGRLFPYGLATFRLTELLNLAKQR---------MGGMK-----ANSDRSHM-VLKLTSDVISMKRRASPLGTAT---LSEESDLPATVDLSPLEKVIREPGAYISTGASLSITVEL-----------QSPIEILSAGSADAL-PASAESEIAALKFSRIVVIIPY-KDSSTLGEVTKAMTNVNLKALPGVP--IRSYQMTESEKMDCETGALDVVTGAQIIDSQFRMVILEGL--VDKGMKYLHQQLQRKGPNDPKGCRMFCNDELRFTRRLYTEFEIDLKRIKLRYPLSVLMTTPDIYMRSKVSANCHQALARLAEMRKVQRLIEVKHLDLFPTSQMLFEV 429          
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: A0A662WRZ5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WRZ5_9STRA)

HSP 1 Score: 166 bits (419), Expect = 3.810e-41
Identity = 120/362 (33.15%), Postives = 184/362 (50.83%), Query Frame = 1
Query:  175 PREIYEVDEIALREALAGAERSSKENAHGVASFRLSGLLDQSCQLISA--------YDKLKV---MTGLSSTASPAKSDTGVAPKLKIRSEICPSKRREIPKGGVEDWHLSEEERLVRLPGAYLDAGATLGIRQEK----GFLSLHQYIYPRGPLRTLQEGSAEGTGPATEELRPFMRAAFVVEYERGGALLREITAAMDQINGQALKDIQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNG-EAYRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQLLQV 1212
            P E+  VD+IA R+       S +   +G+ SFRL+ LL+ + Q + A        Y  LK+   +  +  +ASP            + +    S+  E+P        L+  E+ +R PGAY+  G ++ I+         LS++       PL      S    GP       F R   ++ Y +  A L E+T AM  IN +AL  +   +R+Y+L+  EK D DNG++D++ G  +ID+  R ++LEG  G  K +  + E+++R  PN  + YR   N  + F++RLYT F  DLK+++LR PLP L T P+IY R+KVS +C   L  L  LR+V R++E     LFP AQ LL+V
Sbjct:  395 PLELAIVDDIARRDGRTLLAHSRRLFPYGLVSFRLTELLNTAKQRMGATRAAGDSPYMALKLTADVIAMKRSASP------------LGTTAASSEEAELP----STLDLTALEKAIREPGAYVSTGTSVSIQVALQAPIAVLSVNSGGASVTPLGCGSPASTVPGGPEPPPQLKFSRLVVIIPY-KDSATLGEVTHAMTAINLKALPGVP--IRSYQLSESEKLDCDNGVMDVITGTQIIDSQFRMVILEGLAG--KGMKAMHEQLQRKSPNDPQGYRVFANGTLLFARRLYTAFEIDLKRIKLRYPLPALMTIPDIYMRAKVSENCHQALAKLADLRQVQRLAEVKRLDLFPTAQMLLEV 735          
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: A0A329SI59_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SI59_9STRA)

HSP 1 Score: 166 bits (419), Expect = 3.820e-41
Identity = 127/392 (32.40%), Postives = 198/392 (50.51%), Query Frame = 1
Query:  109 TVGASQEGTVEGVDTSPLKYYPPREIYEVDEIALREALAGAERSSKENAHGVASFRLSGLLDQSCQLISAYDKLKVMTGLSSTASPAKSDTGVAPKLKIRSEICPSKRREIPKGGVEDWHLSEE------------ERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRTLQ-----EGSAEGTGPAT-EELRP-----FMRAAFVVEYERGGALLREITAAMDQINGQALKDIQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNGE-AYRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQLLQV 1212
            T   S +     + T+      P E+ EVD+IA  +       S +   HG+A+FRL+ LL+      +A  +++ M   S     A         LK+ ++I   KRR  P G      LSEE            E+++R PGAY+  GA+L I            I  + P+ TL      E + +   PA+ E+++P     F R   ++ Y +  + L E+T AM  +N  AL  +   +R+Y++   EK D + G LD++ G  +ID+  R I+LEG   ++K +  L ++++R GPN    YR L N ++RFS+RLYT F  DLK+++LR PL VL T P+IY R+KVS +C   L  L  +R+  R+++     LFP  + LL+V
Sbjct:  379 TTPRSADADQPAISTTTTVNSKPMELSEVDDIARSDWRMMLANSGRLFPHGLATFRLTELLN------TAKQRMQGMKTDSDRPYMA---------LKLTTDIISMKRRASPLGTAT---LSEESELPATVDLSPLEKVIREPGAYISTGASLRIN-----------IVLQSPIETLDTDPAAELTVDSEIPASVEDVKPATALKFSRMVVIIPY-KDNSTLGEVTKAMTSVNLTALPGVP--IRSYQMMESEKMDCETGALDVITGTQIIDSQFRMIILEGL--ADKGMKHLHQQLQRKGPNDPLGYRMLCNDELRFSRRLYTVFEIDLKRIKLRYPLSVLMTTPDIYMRAKVSENCHQALARLADMRKAQRLADVKHLDLFPTTKMLLEV 736          
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: A0A024URJ4_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024URJ4_9STRA)

HSP 1 Score: 165 bits (417), Expect = 5.260e-41
Identity = 127/359 (35.38%), Postives = 184/359 (51.25%), Query Frame = 1
Query:  166 YYPPR---EIYEVDEIALREALA-GAERSSKENAHGVASFRLSGLLDQSCQLISAYDKLKVMTGLSSTASPAKSDTGVA-PKLKIRSEICPSKRREIPK-GGVEDWHLSEEERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRTLQEGSAEGTGPATEELRP---FMRAAFVVEYERGGALLREITAAMDQINGQALKDIQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNGEA-YRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQLLQV 1212
            ++PP    ++++VDEIA ++  +    R+   NAHGV  +R              Y+ L+       T +  K + G     LK+ ++I P KRR  PK G  ED +LS+ ++LVRLPG+YL+    L +               + PL     GS   TGP T        F R   V+ Y    A L+ ++ AM+ IN  AL  +   LR+Y LT  +K+  D+G L+++ GF VIDA  R I LEG   +   L+ L + V R   N    +R   N  VRF  RLYT F+ D+K+++LRDPLP +   PE+Y RSKVS +CF  L+ L  +R+  R+ E  +  LFP  Q LL+V
Sbjct:  365 HHPPNAKLDVFQVDEIAKQDIQSLYFVRAGDCNAHGVGMYRF-------------YELLR-------TTNLKKQEAGKPFMTLKLTADIVPHKRRIPPKEGSDEDINLSQVDKLVRLPGSYLNCLTALAVEATL-----------QNPL-----GSNPPTGPPTPCKHGGGVFTRMVVVIPYN-DVATLQNMSKAMESINSAALPGVP--LRSYLLTAAQKEACDSGDLNVITGFQVIDAHYRMIFLEGI--AETGLATLHKMVPRTAANSRTGFRMFANPDVRFVSRLYTAFDVDMKRIKLRDPLPDIVKRPELYMRSKVSENCFQALNRLGDVRKADRLIELKDLNLFPTVQMLLEV 682          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ34_ECTSI2.530e-14761.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK05_9PHAE2.930e-12763.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CB85_9STRA6.780e-4841.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
T0RJV8_SAPDV6.570e-4635.71Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A8J2S3F3_9STRA4.890e-4435.41Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1U4M0_9STRA5.370e-4439.78Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A833T8R7_PHYIN4.860e-4334.85Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
A0A662WRZ5_9STRA3.810e-4133.15Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A329SI59_9STRA3.820e-4132.40Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A024URJ4_9STRA5.260e-4135.38Uncharacterized protein n=3 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80059contigH-elongata_contig80059:317..2668 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score450.7
Seed ortholog evalue7.4e-124
Seed eggNOG ortholog2880.D7FQ34
EggNOG free text desc.Uncharacterized protein FLJ43738-like
EggNOG OGs28MGN@1,2QU03@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_007640.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size1212
Cds size1212
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80059.15663.1prot_H-elongata_contig80059.15663.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig80059 317..2668 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931206.7626173-CDS-H-elongata_contig80059:316..4801622931206.7626173-CDS-H-elongata_contig80059:316..480Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80059 317..480 +
1691679741.461358-CDS-H-elongata_contig80059:316..4801691679741.461358-CDS-H-elongata_contig80059:316..480Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80059 317..480 +
1622931206.7785392-CDS-H-elongata_contig80059:725..11481622931206.7785392-CDS-H-elongata_contig80059:725..1148Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80059 726..1148 +
1691679741.4742386-CDS-H-elongata_contig80059:725..11481691679741.4742386-CDS-H-elongata_contig80059:725..1148Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80059 726..1148 +
1622931206.8141007-CDS-H-elongata_contig80059:1392..16001622931206.8141007-CDS-H-elongata_contig80059:1392..1600Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80059 1393..1600 +
1691679741.4848464-CDS-H-elongata_contig80059:1392..16001691679741.4848464-CDS-H-elongata_contig80059:1392..1600Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80059 1393..1600 +
1622931206.8307073-CDS-H-elongata_contig80059:1776..20131622931206.8307073-CDS-H-elongata_contig80059:1776..2013Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80059 1777..2013 +
1691679741.5034857-CDS-H-elongata_contig80059:1776..20131691679741.5034857-CDS-H-elongata_contig80059:1776..2013Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80059 1777..2013 +
1622931206.8624845-CDS-H-elongata_contig80059:2488..26681622931206.8624845-CDS-H-elongata_contig80059:2488..2668Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80059 2489..2668 +
1691679741.5139916-CDS-H-elongata_contig80059:2488..26681691679741.5139916-CDS-H-elongata_contig80059:2488..2668Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80059 2489..2668 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig80059.15663.1

>prot_H-elongata_contig80059.15663.1 ID=prot_H-elongata_contig80059.15663.1|Name=mRNA_H-elongata_contig80059.15663.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=404bp
RDPRPTFREKRENMIRLERMVAGGYSSEQCSPSDGGTVGASQEGTVEGVD
TSPLKYYPPREIYEVDEIALREALAGAERSSKENAHGVASFRLSGLLDQS
CQLISAYDKLKVMTGLSSTASPAKSDTGVAPKLKIRSEICPSKRREIPKG
GVEDWHLSEEERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRT
LQEGSAEGTGPATEELRPFMRAAFVVEYERGGALLREITAAMDQINGQAL
KDIQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSN
KSLSKLLERVRRAGPNGEAYRALENSKVRFSKRLYTCFNTDLKKVRLRDP
LPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQ
LLQV
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mRNA from alignment at H-elongata_contig80059:317..2668+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig80059.15663.1 ID=mRNA_H-elongata_contig80059.15663.1|Name=mRNA_H-elongata_contig80059.15663.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2352bp|location=Sequence derived from alignment at H-elongata_contig80059:317..2668+ (Himanthalia elongata Himel1 dioecious)
AGAGACCCTCGTCCCACTTTTAGAGAAAAACGGGAGAATATGATTCGATT GGAACGAATGGTAGCCGGCGGATACTCAAGTGAGCAATGCAGCCCGTCTG ACGGTGGCACGGTGGGGGCTTCTCAAGAAGGCACCGTCGAGGGGGTGGAT ACAAGCCCGCTAAAGTGCGTAGCTGCGACCGGCGTCGTTTTTTTATTGGT TATTAGCCTTGTTAAAATAAGTCTAGAGATAATAGTTTGTGACCAACAGC TTGGCAAGCATGATATGTGGCACCCGGGCTTCGCGTTTGCCCATCTTCTG GACTTAAATTTACTGGGAGATCATAATGTTTCCTATGCATGCTGTTCTGC GTACGTACCATCCACTTCGATAAAACATGATTAAAATATGACATTTGTGA AAATCACAGGTATTACCCGCCCCGCGAAATTTACGAAGTGGATGAAATTG CCCTAAGAGAAGCACTCGCTGGGGCAGAGAGATCAAGCAAAGAGAACGCG CATGGTGTGGCTTCCTTCCGTCTGTCTGGACTACTCGACCAGAGCTGTCA GCTGATCTCGGCCTACGACAAGCTCAAGGTTATGACAGGTCTGTCATCTA CGGCTTCGCCAGCTAAAAGTGACACGGGTGTAGCTCCCAAGCTGAAGATT CGCTCAGAGATATGCCCAAGTAAGCGAAGGGAAATTCCAAAGGGGGGCGT TGAAGACTGGCATTTGTCGGAGGAAGAAAGGCTTGTACGTTTGCCTGGCG CGTATCTCGACGCAGGGGCTACCCTTGGGATCAGGCAAGAGAAAGGCTTT CTAAGCTTGCATCAATACATATATCCACGAGGGTCAGGCTGATCGGGTCG CTGTAAAAATACGTGCATGTGAAATCGAGAAGAAGATGGACACCGCTCCT CTCCACACCGCCTACACCACTGTAGACGGGTCCTCCCGTCGAGATATTTC TGATTCCTTTAAACCCAACCCTTTCAGTAGCTCCACTACGCATCACGAAG GCATTGTCGGACGTCTCTGCTATCGAGCGTTTCAGCGCATCTATCACCCG TTCGTTTCCAGGTTCGAGCTAGCCAGACCACTGCGCACTCTTCAAGAGGG CTCGGCGGAAGGCACGGGACCAGCGACGGAGGAACTCCGACCTTTCATGC GGGCTGCTTTTGTGGTCGAGTACGAGAGAGGAGGAGCGCTTCTGCGCGAG ATAACGGCGGCGATGGACCAGATCAACGGCCAGGCCTTAAAAGACATTCA GGGGTCGCTGCGGGCGTATCGCCTCACGCCAGAGGTCGGCTTCTAAGCTC GTCGATTATTCATGTGAATGCGCGCGTGGCTGGAAACATTACCGAGCCAC CCCTGGCCACATAGCAACTACACTCGCCGCGAAAATAACCTTAAAACCAT TTCAAATATGTATATTGTCTGACTCACATGAAGTTAAAATATTCGTGCCC TGTTGAGCAGGAAAAAAAAGACACGGATAACGGAATCCTAGACATCGTGT GCGGTTTCATGGTGATCGACGCGGACAGTCGGACGATAGTGCTTGAGGGT GCAGGGGGATCAAATAAGAGTCTGTCAAAGCTCCTGGAGAGGGTCAGACG CGCAGGCCCAAACGGAGAGGCGTATCGGGCACTTGAGAATTCGAAAGTGC GCTTTTCGAAGCGTCTCTATACTTGTTTCAACACCGATTTAAAGAAGGTA TTAAATACCAGTGATAAGAAAACACGTTGGGCGTGGTGAAATCGGCCTCT CTGCAAGATAGACCGAGAAAAATTTCTCAACCGCTGACACGGGCTAACTG ACATGAAAGGGCAGGACAACATAGGCTGTACGAGACGATCATGCGGGACG TTAGGTAGAGGGTATGCGTGTGCTAGTCATGGCGGAAGTTATTCGATGCA CCCCGAGGCGTGTGCCTCGCTCGTCGGGCAACGTGACGCGGGTGTAACTC CGTAAGCAGATAAGGTATATGTTTCCTTGTCACTTCTTGCGCAGACGCAA AGGAACTACTGTACCTAGCTTGATTCATGCAATCCTCAACATATATACTT CGTTTCGCAGCTTGTCATTTACGCAGCAAGTATGAAGCTTTACCTCACCA TTCCGTCTAGGAGAAATATAAGTTCTGGGTGATGACCGCGTCTTTCTGCC TCTCCATGGTGCTGTACGGCAGGTTCGTCTGCGTGATCCCTTACCCGTGT TGTGTACGAATCCAGAAATTTACAATCGTTCCAAGGTCAGCGCGGATTGC TTTGACGTCCTCCATAGCTTGCAAATGCTGAGGAGGGTCAGCAGAATGAG CGAGGCTGCGGAGTACGCCCTTTTCCCCGCCGCCCAACAACTCCTCCAGG TG
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Coding sequence (CDS) from alignment at H-elongata_contig80059:317..2668+

>mRNA_H-elongata_contig80059.15663.1 ID=mRNA_H-elongata_contig80059.15663.1|Name=mRNA_H-elongata_contig80059.15663.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2424bp|location=Sequence derived from alignment at H-elongata_contig80059:317..2668+ (Himanthalia elongata Himel1 dioecious)
AGAGACCCTCGTCCCACTTTTAGAGAAAAACGGGAGAATATGATTCGATT
GGAACGAATGGTAGCCGGCGGATACTCAAGTGAGCAATGCAGCCCGTCTG
ACGGTGGCACGGTGGGGGCTTCTCAAGAAGGCACCGTCGAGGGGGTGGAT
ACAAGCCCGCTAAAAGAGACCCTCGTCCCACTTTTAGAGAAAAACGGGAG
AATATGATTCGATTGGAACGAATGGTAGCCGGCGGATACTCAAGTGAGCA
ATGCAGCCCGTCTGACGGTGGCACGGTGGGGGCTTCTCAAGAAGGCACCG
TCGAGGGGGTGGATACAAGCCCGCTAAAGTATTACCCGCCCCGCGAAATT
TACGAAGTGGATGAAATTGCCCTAAGAGAAGCACTCGCTGGGGCAGAGAG
ATCAAGCAAAGAGAACGCGCATGGTGTGGCTTCCTTCCGTCTGTCTGGAC
TACTCGACCAGAGCTGTCAGCTGATCTCGGCCTACGACAAGCTCAAGGTT
ATGACAGGTCTGTCATCTACGGCTTCGCCAGCTAAAAGTGACACGGGTGT
AGCTCCCAAGCTGAAGATTCGCTCAGAGATATGCCCAAGTAAGCGAAGGG
AAATTCCAAAGGGGGGCGTTGAAGACTGGCATTTGTCGGAGGAAGAAAGG
CTTGTACGTTTGCCTGGCGCGTATCTCGACGCAGGGGCTACCCTTGGGAT
CAGGCAAGAGAAAGGCTTTCTAAGCTTGCATCAATACATATATCCACGAG
GGTATTACCCGCCCCGCGAAATTTACGAAGTGGATGAAATTGCCCTAAGA
GAAGCACTCGCTGGGGCAGAGAGATCAAGCAAAGAGAACGCGCATGGTGT
GGCTTCCTTCCGTCTGTCTGGACTACTCGACCAGAGCTGTCAGCTGATCT
CGGCCTACGACAAGCTCAAGGTTATGACAGGTCTGTCATCTACGGCTTCG
CCAGCTAAAAGTGACACGGGTGTAGCTCCCAAGCTGAAGATTCGCTCAGA
GATATGCCCAAGTAAGCGAAGGGAAATTCCAAAGGGGGGCGTTGAAGACT
GGCATTTGTCGGAGGAAGAAAGGCTTGTACGTTTGCCTGGCGCGTATCTC
GACGCAGGGGCTACCCTTGGGATCAGGCAAGAGAAAGGCTTTCTAAGCTT
GCATCAATACATATATCCACGAGGACCACTGCGCACTCTTCAAGAGGGCT
CGGCGGAAGGCACGGGACCAGCGACGGAGGAACTCCGACCTTTCATGCGG
GCTGCTTTTGTGGTCGAGTACGAGAGAGGAGGAGCGCTTCTGCGCGAGAT
AACGGCGGCGATGGACCAGATCAACGGCCAGGCCTTAAAAGACATTCAGG
GGTCGCTGCGGGCGTATCGCCTCACGCCAGAGACCACTGCGCACTCTTCA
AGAGGGCTCGGCGGAAGGCACGGGACCAGCGACGGAGGAACTCCGACCTT
TCATGCGGGCTGCTTTTGTGGTCGAGTACGAGAGAGGAGGAGCGCTTCTG
CGCGAGATAACGGCGGCGATGGACCAGATCAACGGCCAGGCCTTAAAAGA
CATTCAGGGGTCGCTGCGGGCGTATCGCCTCACGCCAGAGGAAAAAAAAG
ACACGGATAACGGAATCCTAGACATCGTGTGCGGTTTCATGGTGATCGAC
GCGGACAGTCGGACGATAGTGCTTGAGGGTGCAGGGGGATCAAATAAGAG
TCTGTCAAAGCTCCTGGAGAGGGTCAGACGCGCAGGCCCAAACGGAGAGG
CGTATCGGGCACTTGAGAATTCGAAAGTGCGCTTTTCGAAGCGTCTCTAT
ACTTGTTTCAACACCGATTTAAAGAAGGAAAAAAAAGACACGGATAACGG
AATCCTAGACATCGTGTGCGGTTTCATGGTGATCGACGCGGACAGTCGGA
CGATAGTGCTTGAGGGTGCAGGGGGATCAAATAAGAGTCTGTCAAAGCTC
CTGGAGAGGGTCAGACGCGCAGGCCCAAACGGAGAGGCGTATCGGGCACT
TGAGAATTCGAAAGTGCGCTTTTCGAAGCGTCTCTATACTTGTTTCAACA
CCGATTTAAAGAAGGTTCGTCTGCGTGATCCCTTACCCGTGTTGTGTACG
AATCCAGAAATTTACAATCGTTCCAAGGTCAGCGCGGATTGCTTTGACGT
CCTCCATAGCTTGCAAATGCTGAGGAGGGTCAGCAGAATGAGCGAGGCTG
CGGAGTACGCCCTTTTCCCCGCCGCCCAACAACTCCTCCAGGTGGTTCGT
CTGCGTGATCCCTTACCCGTGTTGTGTACGAATCCAGAAATTTACAATCG
TTCCAAGGTCAGCGCGGATTGCTTTGACGTCCTCCATAGCTTGCAAATGC
TGAGGAGGGTCAGCAGAATGAGCGAGGCTGCGGAGTACGCCCTTTTCCCC
GCCGCCCAACAACTCCTCCAGGTG
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