mRNA_H-elongata_contig80040.15661.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig80040.15661.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI) HSP 1 Score: 136 bits (342), Expect = 2.170e-35 Identity = 68/93 (73.12%), Postives = 77/93 (82.80%), Query Frame = 1
Query: 1 TIEESVHAELKTLRGLAAGTLTVELSCEGVLMWWKRWESSYPLLARAARVVFGAPASSAVLERDFSDAGHMMTSSRSSTDVKYVDMILFLHGN 279
T E AEL+TLRG+ AGTLT +LSCEGVL WWK+W YPLLARAARVVFGAPAS+AVLERDF+DA MM SSRS+ D KYV+M+LFLHGN
Sbjct: 518 TFEPMARAELETLRGVEAGTLTDDLSCEGVLEWWKKWGRLYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGN 610
BLAST of mRNA_H-elongata_contig80040.15661.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE) HSP 1 Score: 119 bits (299), Expect = 5.850e-33 Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 1
Query: 70 ELSCEGVLMWWKRWESSYPLLARAARVVFGAPASSAVLERDFSDAGHMMTSSRSSTDVKYVDMILFLHGN 279
ELSC+ VL WWKRW SSYPLLARAARVVFGAPAS+AVLE DF DAG +MTSSRS+TD KYV+MILFLHGN
Sbjct: 31 ELSCDSVLKWWKRWMSSYPLLARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGN 100
BLAST of mRNA_H-elongata_contig80040.15661.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE) HSP 1 Score: 126 bits (317), Expect = 6.620e-32 Identity = 62/93 (66.67%), Postives = 73/93 (78.49%), Query Frame = 1
Query: 1 TIEESVHAELKTLRGLAAGTLTVELSCEGVLMWWKRWESSYPLLARAARVVFGAPASSAVLERDFSDAGHMMTSSRSSTDVKYVDMILFLHGN 279
+ E++ AEL LR + G+L LSCE VL WWK W +YPLLAR ARVVFGAPAS+AVLERDFS+AG MMTSSRS+ D KYV+MI+FLHGN
Sbjct: 578 SFEQTARAELTNLRAVQGGSLAPGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGN 670
BLAST of mRNA_H-elongata_contig80040.15661.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE) HSP 1 Score: 117 bits (294), Expect = 3.950e-29 Identity = 59/93 (63.44%), Postives = 69/93 (74.19%), Query Frame = 1
Query: 1 TIEESVHAELKTLRGLAAGTLTVELSCEGVLMWWKRWESSYPLLARAARVVFGAPASSAVLERDFSDAGHMMTSSRSSTDVKYVDMILFLHGN 279
+ E++ AEL LR + G+L L CE VL WWK W +YPLLAR ARVV GA AS+AVLE DFS+AG MMTSSRS+ D KYV+MILFLHGN
Sbjct: 351 SFEQTARAELTKLRAVQGGSLAAGLRCEDVLKWWKMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGN 443
BLAST of mRNA_H-elongata_contig80040.15661.1 vs. uniprot
Match: A0A6H5JML0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE) HSP 1 Score: 112 bits (280), Expect = 1.280e-28 Identity = 56/93 (60.22%), Postives = 67/93 (72.04%), Query Frame = 1
Query: 1 TIEESVHAELKTLRGLAAGTLTVELSCEGVLMWWKRWESSYPLLARAARVVFGAPASSAVLERDFSDAGHMMTSSRSSTDVKYVDMILFLHGN 279
+ +++ AEL LR + G L L CE VL WWK W +YPLLAR ARVVFGAPAS+AVLE FS+AG M TSSRS+ D YV+MI+FLHGN
Sbjct: 114 SFKQTARAELTKLRAVQGGRLAARLRCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLECYFSNAGRMTTSSRSTMDSTYVEMIMFLHGN 206
BLAST of mRNA_H-elongata_contig80040.15661.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI) HSP 1 Score: 113 bits (283), Expect = 2.760e-27 Identity = 59/90 (65.56%), Postives = 65/90 (72.22%), Query Frame = 1
Query: 10 ESVHAELKTLRGLAAGTLTVELSCEGVLMWWKRWESSYPLLARAARVVFGAPASSAVLERDFSDAGHMMTSSRSSTDVKYVDMILFLHGN 279
E AEL+TLR + L + SCEGVL WWKR E SYPLLAR ARVVF APAS V ERD AG MMTSSRS+ D KYV+M+LFLHGN
Sbjct: 623 ERARAELETLRSASDDALFGDTSCEGVLNWWKRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGN 712
BLAST of mRNA_H-elongata_contig80040.15661.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 6.660e-19 Identity = 44/58 (75.86%), Postives = 48/58 (82.76%), Query Frame = 1
Query: 109 WESSYPLLARAARVVFGAPASSAVLERDFSDAGHMMTSSRSSTD-VKYVDMILFLHGN 279
W YPLLAR ARVVFGAPAS+AVLERDFS+AG MMTSSR + D YV+MILFLHGN
Sbjct: 2 WAHVYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGN 59
BLAST of mRNA_H-elongata_contig80040.15661.1 vs. uniprot
Match: A0A6H5KEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 3.970e-16 Identity = 38/56 (67.86%), Postives = 44/56 (78.57%), Query Frame = 1
Query: 1 TIEESVHAELKTLRGLAAGTLTVELSCEGVLMWWKRWESSYPLLARAARVVFGAPA 168
T E AE +TLRG+ AG+LT +L CEGVL WW++WE SYPLLARAARV FGAPA
Sbjct: 317 TFEPMACAEFETLRGVEAGSLTDDLGCEGVLKWWEKWEGSYPLLARAARVDFGAPA 372
BLAST of mRNA_H-elongata_contig80040.15661.1 vs. uniprot
Match: A0A6H5KW12_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW12_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 1.430e-15 Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 1
Query: 118 SYPLLARAARVVFGAPASSAVLERDFSDAGHMMTSSRSSTDVKY-VDMILFLHGN 279
+Y LL ARVVFGAPAS+A LERDFS+AG MMTSSRS+ D KY V+MILFLHGN
Sbjct: 5 AYLLLTGVARVVFGAPASAAALERDFSNAGRMMTSSRSAMDSKYYVEMILFLHGN 59
BLAST of mRNA_H-elongata_contig80040.15661.1 vs. uniprot
Match: A0A6H5KGU9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU9_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 1.210e-12 Identity = 32/39 (82.05%), Postives = 34/39 (87.18%), Query Frame = 1
Query: 70 ELSCEGVLMWWKRWESSYPLLARAARVVFGAPASSAVLE 186
ELSCE VL WWKRW SSYPLLARA RVVFGAPAS+A +E
Sbjct: 31 ELSCESVLKWWKRWMSSYPLLARATRVVFGAPASAAYVE 69 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80040.15661.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig80040.15661.1 >prot_H-elongata_contig80040.15661.1 ID=prot_H-elongata_contig80040.15661.1|Name=mRNA_H-elongata_contig80040.15661.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp TIEESVHAELKTLRGLAAGTLTVELSCEGVLMWWKRWESSYPLLARAARVback to top mRNA from alignment at H-elongata_contig80040:1260..1538- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig80040.15661.1 ID=mRNA_H-elongata_contig80040.15661.1|Name=mRNA_H-elongata_contig80040.15661.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=279bp|location=Sequence derived from alignment at H-elongata_contig80040:1260..1538- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig80040:1260..1538- >mRNA_H-elongata_contig80040.15661.1 ID=mRNA_H-elongata_contig80040.15661.1|Name=mRNA_H-elongata_contig80040.15661.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=558bp|location=Sequence derived from alignment at H-elongata_contig80040:1260..1538- (Himanthalia elongata Himel1 dioecious)back to top |