prot_H-elongata_contig8001.15658.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8001.15658.1
Unique Nameprot_H-elongata_contig8001.15658.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1630
Homology
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BLAST of mRNA_H-elongata_contig8001.15658.1 vs. uniprot
Match: D8LF55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF55_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 1.080e-32
Identity = 103/251 (41.04%), Postives = 138/251 (54.98%), Query Frame = 0 
Query:    1 MLQAMVGAGNRPRARGLHPVEHAQLTEILDSWRSRGVLLPSP-LQCLEKSLATLKP------PPPTTGLAGEEAAGVAKNRPKRAAWIAVPLFSH--DDNPHEAAP--VGR-SPTGLASAADRGMALSLSGS--RTDDDREASIEVCLKELLARNAKNTDEWWGCVFEGRGPFREGPEGYWSMHLRRLQDDAQVRRNQGRALVGVNGDRDGLSGDWAWRAGETPANRMSATGESQENGTPSSPSTVPSEAS 237
            M++A+VGAG++PR RGLHP EHAQL+ ++D+W  RG + PSP L+ + K L  L P       P   G      AG  K+  KRAAW+ VP  +   D +  + +P  V R SP    S+   G   + +G+  +T+ +R AS+E  L +LLARN      WW   F+G GPF +GPEG WS+  +R  +D   RRNQ   L+G NGDR  L        G        A G   + G PS+PSTVPSEAS
Sbjct:  165 MMEAVVGAGSKPRRRGLHPTEHAQLSRMVDAWLRRGSV-PSPSLESIGKQLLALDPGGDAVVSPDRNGAR----AGKGKSSKKRAAWVRVPAAAAIGDSSEGKQSPGDVARLSPPRHPSSGGAGGPAASAGAAPQTEAERHASLESVLTDLLARNVAVPGAWWAQAFQGGGPFPQGPEGCWSLQYQRANEDPGHRRNQVTGLIGANGDRR-LGAGSGVDLGSVKTEAAGADGLDSDGGAPSTPSTVPSEAS 409
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BLAST of mRNA_H-elongata_contig8001.15658.1 vs. uniprot
Match: A0A6H5JK50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK50_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 9.600e-28
Identity = 93/252 (36.90%), Postives = 125/252 (49.60%), Query Frame = 0 
Query:    1 MLQAMVGAGNRPRARGLHPVEHAQLTEILDSWRSRG-VLLPSPLQCLEKSLATLKP--PPPTTGLAGEEAAGVAKNRPKRAAWIAVPLFSHDDNPHEAAPVGRSPTGLASAADRGMALSL-----------------SGSRTDDDREASIEVCLKELLARNAKNTDEWWGCVFEGRGPFREGPEGYWSMHLRRLQDDAQVRRNQGRALVGVNGDRDGLSGDWAWRAGETPANRMSATGESQENGTPSSPSTV 232
            M++A++GAG++PR RGLHP EHAQL+ ++D+W  RG V LPS L+ + K L  L P   P  +       AG  K   KRAAW+ VP          AA +G S  G  S  D      L                 +  +T+ +R AS+E  L ++LARN      WW   F+G GPF +GPEG WS+  +R  +D   RRNQ   L+G +GD    +G      G        A G   + G PS+PSTV
Sbjct:  164 MMEAVLGAGSKPRRRGLHPTEHAQLSRMVDAWLQRGSVPLPS-LESIGKQLLALDPGGDPVVSPDRNGARAGKGKTSNKRAAWVRVPA---------AAAIGDSLEGKQSPGDVARLSPLRHHSSGGXXXXXXXXXGAAPQTEAERHASLESVLTDVLARNVAVPGAWWAQAFQGGGPFPQGPEGCWSLQYQRANEDPGHRRNQVTGLIGADGDHRFGAGSGV-DLGSVKTEAADADGLDSDGGAPSTPSTV 404
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8001.15658.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LF55_ECTSI1.080e-3241.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK50_9PHAE9.600e-2836.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 350..406
NoneNo IPR availableCOILSCoilCoilcoord: 300..323

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8001contigH-elongata_contig8001:3471..9643 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8001.15658.1mRNA_H-elongata_contig8001.15658.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8001 913..10088 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8001.15658.1 ID=prot_H-elongata_contig8001.15658.1|Name=mRNA_H-elongata_contig8001.15658.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1630bp
MLQAMVGAGNRPRARGLHPVEHAQLTEILDSWRSRGVLLPSPLQCLEKSL
ATLKPPPPTTGLAGEEAAGVAKNRPKRAAWIAVPLFSHDDNPHEAAPVGR
SPTGLASAADRGMALSLSGSRTDDDREASIEVCLKELLARNAKNTDEWWG
CVFEGRGPFREGPEGYWSMHLRRLQDDAQVRRNQGRALVGVNGDRDGLSG
DWAWRAGETPANRMSATGESQENGTPSSPSTVPSEASPSPEPVSPTPAAV
APVVPTPKSESVKEESTEGEPRSEPRVKELSPSSAKPQQEQQEKPRSPEK
RVLSKEEREAEERQRRKEEARLAGKKKGKMRGLEIERQKKDRELQRQHII
AETKERKEAADRAERKAKEMAEAAVAVEEEALRRRKESEERARRAKASEA
RSAEEEGRRGHGKSRERERERMRGEQDGSRKERDAEARGGRLGERAGKSG
RDIDGWCRDGRGNLSENEETEKGNRRKERDRARGREKEDGRWNLDVNDGI
HGRSRGKDHEDIHHEVFDDRERDGRRAYGSHRSTEDPDTTDARLKNDSKE
RDTENNVERKRRRRSKGDQEAGERRGTRSDNDDRDHKASKKKSKKDRKEK
KEKRREHRHSERAKAGSEETRGRKRSRDFHATDLDGAPPLEEKGSRPRDD
SRDFGMQPVDLPPRRSADPHTHHRPAEPELGRSGSERRGMSRQRSLLEPG
SSLSRHDSERPAKGGGSEDRRNGRGDGSEKRSRRNEGDGGADAPGDHHRA
VDTARERHTMRASNREPSSSSAGRGGGLPGMDVYGAEVSPPTGLEVGRHD
SKPRSGRNDHYGGGSGSTSLDRYGLSASTGREGPSQDRRKGDGSRPGLAA
MVVYGPSLEDDVRSGNREEKGNRERDYAPADRVGREASLDNRDRPRQDGF
DRSMLDDRDKPRLNDRDRPRLDGRDRSTMDDRNRQRLEDRDRSMMDDRNR
QRLEDRDRSMMDDRNRQRLDDRDRLRPDNRDWPMVDIRDRPIVDGRGRPI
LDGRDRQRLGDRERQRLGDRDRPMLDIRDRPMLDIRDRPMLDMRDRPMLN
DRNRPPLMLNDRDRPPMMPHDRDRPILLNNRDRPPMMLNDRDRPVMLSDR
DRHRPIMREEWRGRPQDWLGRTIDRRRGDAARHDRGIGSRERHDSRDEEA
AADAEQPVEDEPEEGELVIELSASLPTPTPTSSTTKKSRWGKVSREDEVV
RRDGGARDGLRPSRDRARGDKRRGEGETGERSVKGDEGGRSAYGGQTQGG
DDAEKVVEDSALEETPAQSIKGEDGGSSTNVKVDGESFGSLGRVEDATDE
GITPSATRRSDSQDNASLASRGTDLEPPVRLESLARESGSIPLAETKATG
MAARESQEQDTTAQEGKGEKGGVDAAREDGPVSAGVCSSLAEKRGDYSAR
GDPENPSVESNAEEGDTSVPSGSPSEKRPPKQVGSGGAAESSKRRLTGDP
GNLSLFIRKNPPGPTAGTSHSTTIASASAVDDGAPRHRSASDSSSKSQQG
ASSHESGTHVSVAGNESTAVSNAVSVSSVAAPDDSRAPRAPVGLAATWGS
GRSTHTISGWGGGNGAGAGVGTLGTSDAAVGVKKEGGGKEEVTARPGGAA
SRLMNAALQSTRDVGRREKKGAEGGRSRG*
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