mRNA_H-elongata_contig80005.15656.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig80005.15656.1
Unique NamemRNA_H-elongata_contig80005.15656.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig80005.15656.1 vs. uniprot
Match: D8LJD4_ECTSI (Glutamate--cysteine ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJD4_ECTSI)

HSP 1 Score: 287 bits (735), Expect = 2.370e-89
Identity = 142/188 (75.53%), Postives = 156/188 (82.98%), Query Frame = 1 
Query:    1 LQARRGHNVDIRIPLFRDKDTPEFRGEEAYLPPPLGAASSGCAKSSPVPE-ETATAPHVHMDAMAFGMGCCCLQVTFQARDIDESRFMYDQLAVLSPVMLALTAATPVLKGRLVDTDVRWNTIALSVDDRTLAERGLMDHDPVAKEAAKDPSMVSGGIGRLRKSRYDSISTYLHYCKRRAENPMHVLE 561
            ++ARRG+NVDIRIPLFRD++TPEF G EA LP             +P    E A  PHVHMDAMAFGMGCCCLQVTFQARD+DESR+MYDQLAVLSPVMLALTAATP+LKGRLVDTDVRW+TIA SVDDRT AERGL+D DP AKEAA+DPSMV  G+ RL KSRYDSIS+YLHYCKRR ENPMHVLE
Sbjct:  179 IRARRGNNVDIRIPLFRDENTPEFHGGEAALPXXXXXXPPAACPINPTQGLEKAHGPHVHMDAMAFGMGCCCLQVTFQARDVDESRYMYDQLAVLSPVMLALTAATPILKGRLVDTDVRWDTIATSVDDRTPAERGLLDADPAAKEAARDPSMVGDGVARLYKSRYDSISSYLHYCKRREENPMHVLE 366
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BLAST of mRNA_H-elongata_contig80005.15656.1 vs. uniprot
Match: A0A836CE91_9STRA (Glutamate--cysteine ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE91_9STRA)

HSP 1 Score: 240 bits (612), Expect = 4.200e-72
Identity = 123/188 (65.43%), Postives = 140/188 (74.47%), Query Frame = 1 
Query:    1 LQARRGHNVDIRIPLFRDKDTPEFRGEEAYLPPPLGAASSGCAKSSPVPEETAT-APHVHMDAMAFGMGCCCLQVTFQARDIDESRFMYDQLAVLSPVMLALTAATPVLKGRLVDTDVRWNTIALSVDDRTLAERGLMDHDPVAKEAAKDPSMVSGGIGRLRKSRYDSISTYLHYCKRRAENPMHVLE 561
            ++ARRG NVDIR+PL+ D  TPE+  E    P       +G A  +  P  TA  AP VHMDAMAFGMGCCCLQVTFQ RDIDESRFMYDQLAVLSP+MLAL+AATP+LKGRLVDTDVRWN I+ SVDDRT AE G             DP++V GGI RL KSRYDSISTYLHYC+RR++NPM+VLE
Sbjct:  158 IRARRGSNVDIRVPLYHDSQTPEYESESQCRP-----RVNGVAAGNEAPVMTAAGAPAVHMDAMAFGMGCCCLQVTFQGRDIDESRFMYDQLAVLSPIMLALSAATPILKGRLVDTDVRWNVISASVDDRTPAELG-----EATAAVTPDPTLVGGGIRRLLKSRYDSISTYLHYCRRRSDNPMYVLE 335
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BLAST of mRNA_H-elongata_contig80005.15656.1 vs. uniprot
Match: A0A7S3HD86_9STRA (Glutamate--cysteine ligase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HD86_9STRA)

HSP 1 Score: 197 bits (502), Expect = 7.500e-61
Identity = 99/176 (56.25%), Postives = 124/176 (70.45%), Query Frame = 1 
Query:    1 LQARRGHNVDIRIPLFRDKDTPEFRGEEAYLPPPLGAASSGCAKSSPVPEETATAPHVHMDAMAFGMGCCCLQVTFQARDIDESRFMYDQLAVLSPVMLALTAATPVLKGRLVDTDVRWNTIALSVDDRTLAERGLMDHDPVAKEAAKDPSMVSGGIGRLRKSRYDSISTYLHYCK 528
            +++RRG  VDI++PLF+D +TPEF  + A           G   S P   +     ++HMDAM FGMG CCLQVTFQARD+DESR+MYDQLAVL+P+MLA+TAATP+ KGRL D DVRW  IA SVDDRT AERG++  +  A  AA DP +   GI  + KSRYDSISTY+++CK
Sbjct:    2 IRSRRGQKVDIQVPLFKDINTPEFANQTAQK-------EDGSKVSLPEGYKLEPDTNIHMDAMGFGMGMCCLQVTFQARDVDESRYMYDQLAVLAPIMLAMTAATPIFKGRLADIDVRWTVIAQSVDDRTPAERGILSPEETA--AAADPRLAGQGIKPIPKSRYDSISTYIYHCK 168
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BLAST of mRNA_H-elongata_contig80005.15656.1 vs. uniprot
Match: A0A7S2SFD3_9STRA (Glutamate--cysteine ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFD3_9STRA)

HSP 1 Score: 196 bits (497), Expect = 3.990e-55
Identity = 106/185 (57.30%), Postives = 125/185 (67.57%), Query Frame = 1 
Query:    1 LQARRGHNVDIRIPLFRDKDTPEFRGEEAYLPPPLGAASSGCAKSSPVPEETATAPHVHMDAMAFGMGCCCLQVTFQARDIDESRFMYDQLAVLSPVMLALTAATPVLKGRLVDTDVRWNTIALSVDDRTLAERGLMDHDPVAKEAAKDPSMVSGGIGRLRKSRYDSISTYLHYCKRRAENPMHV 555
            ++ RRG  VDIR+PLF+D  TPEF+        P  A +         P+E+   PH+ MDAMAFGMGCCCLQVTFQARD+DESR+M+DQLAVLSPV LALTAATPVLKGRL DTDVRW+TIA SVDDRT  ERG         E      M  GG  RLRKSRY S+S Y+++C   + NP +V
Sbjct:  210 IRTRRGSTVDIRVPLFKDTQTPEFQS-------PSQAGTH--------PDES---PHISMDAMAFGMGCCCLQVTFQARDVDESRYMFDQLAVLSPVFLALTAATPVLKGRLADTDVRWDTIAASVDDRTPMERGEDAPTAADDERLGRAEMAGGGRRRLRKSRYGSVSGYIYHC---SANPGYV 373
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BLAST of mRNA_H-elongata_contig80005.15656.1 vs. uniprot
Match: A0A482SUB9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUB9_9ARCH)

HSP 1 Score: 186 bits (471), Expect = 1.400e-54
Identity = 94/181 (51.93%), Postives = 125/181 (69.06%), Query Frame = 1 
Query:    1 LQARRGHNVDIRIPLFRDKDTPEFRGEEAYLPPPLGAASSGCAKSSPVP------EETATAPHVHMDAMAFGMGCCCLQVTFQARDIDESRFMYDQLAVLSPVMLALTAATPVLKGRLVDTDVRWNTIALSVDDRTLAERGLMDHDPVAKEAAKDPSMVSGGIGRLRKSRYDSISTYLHYC 525
            ++ RRG  V+I+IPL+RD  TPEF    A L P     S   + S+P+P      E+T    ++HMD MAFGMG CCLQVTFQA++ DESR+MYDQLAVL+P+M+A+TAA+P+ KGRL D DVRW  I+ SVDDRT  ERG +     A+   +DP   + G+ R+ KSRYDS+STY+++C
Sbjct:   47 IRMRRGEKVNIKIPLYRDIHTPEFSRTTAELSPASSPPSEPSSASTPLPSGYTLEEDT----NIHMDCMAFGMGMCCLQVTFQAQNCDESRYMYDQLAVLAPIMMAMTAASPIFKGRLADIDVRWTVISQSVDDRTPVERGEVSSALAAEH--RDPHKANDGVIRIPKSRYDSVSTYIYHC 221
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BLAST of mRNA_H-elongata_contig80005.15656.1 vs. uniprot
Match: A0A7R9U411_9STRA (Glutamate--cysteine ligase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U411_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.570e-52
Identity = 104/192 (54.17%), Postives = 123/192 (64.06%), Query Frame = 1 
Query:    1 LQARRGHNVDIRIPLFRDKDTPEFRGEEAYLPPPLGAASSGCAKSSPVPEETATAPHVHMDAMAFGMGCCCLQVTFQARDIDESRFMYDQLAVLSPVMLALTAATPVLKGRLVDTDVRWNTIALSVDDRTLAERGLMDHDPVAKEAAKDPSMVSGGIGRLRKSRYDSISTYLHYCKRRAENPMHVLEVGVSR 576
            ++ RRG NVDIR+PLFRD  TPE+              S G          +A  P V MDAMA+GMGCCCLQVTFQARD+ ESR+MYDQLAVL+P+MLA +AA PV KGRLVDTDVRW+ IA S DDR  AERG    + V  + A+D +MV  GI R+ KSRYDSIS YL+ C     NP   +  G  R
Sbjct:  191 IRTRRGANVDIRLPLFRDTHTPEY--------------SKG----------SALEPVVKMDAMAYGMGCCCLQVTFQARDLQESRYMYDQLAVLAPIMLAFSAAAPVFKGRLVDTDVRWSVIAESCDDRRPAERG----EAVDLDEARDSTMVGDGIKRVYKSRYDSISRYLYTCNPTNANPCCPIAQGAIR 354
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BLAST of mRNA_H-elongata_contig80005.15656.1 vs. uniprot
Match: A0A7S3XQT3_HETAK (Glutamate--cysteine ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQT3_HETAK)

HSP 1 Score: 183 bits (465), Expect = 1.160e-51
Identity = 96/177 (54.24%), Postives = 122/177 (68.93%), Query Frame = 1 
Query:    1 LQARRGHNVDIRIPLFRDKDTPEFRGEEAYLPPPLGAASSGCAKSSPVPEET-ATAPHVHMDAMAFGMGCCCLQVTFQARDIDESRFMYDQLAVLSPVMLALTAATPVLKGRLVDTDVRWNTIALSVDDRTLAERGLMDHDPVAKEAAKDPSMVSGGIGRLRKSRYDSISTYLHYCK 528
            ++ RRG NVDIRIPLF+D  TPEF+  +      + AA++G    +P  +   A  P VHMDAMAFGMGCCC+Q+TFQA+++DESRF+YDQL VL+P+ +ALTAATP+ +GRLV TD RW  I+ SVDDRT AE G     P       DP +  GG+ RL KSRYDSIS +L  C+
Sbjct:   23 IRKRRGSNVDIRIPLFKDTFTPEFQNTKE-----VDAATAGI--WAPTADGGGAEGPCVHMDAMAFGMGCCCVQLTFQAKNLDESRFLYDQLGVLAPLFMALTAATPIHRGRLVATDARWRAISASVDDRTPAEAGRA-RPPAGAAHTPDPDLAGGGVRRLPKSRYDSISCFLQSCR 191
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BLAST of mRNA_H-elongata_contig80005.15656.1 vs. uniprot
Match: A0A835ZCQ8_9STRA (Glutamate--cysteine ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCQ8_9STRA)

HSP 1 Score: 184 bits (468), Expect = 4.300e-51
Identity = 97/178 (54.49%), Postives = 122/178 (68.54%), Query Frame = 1 
Query:    1 LQARRGHNVDIRIPLFRDKDTPEFRGEEAYLPPPLGAASSGCAKSSPVPEETATAPHVHMDAMAFGMGCCCLQVTFQARDIDESRFMYDQLAVLSPVMLALTAATPVLKGRLVDTDVRWNTIALSVDDRTLAERGLMDHDPVAKEAAKDPSMVSGGIGRLRKSRYDSISTYLHYCKRR 534
            ++ARRG  VDIR+PL+RD  TPE+            A   G A ++      A AP++H DAMAFGMGCCCLQ+TFQARD+ ESR+MYDQLAVLSP+MLAL+AATP+ +GRL DTDVRW+ I+ SVDDRT AERG+      A     D  M   G+ +  KSRY SIST++H C+R+
Sbjct:  218 IRARRGAKVDIRVPLYRDGCTPEWL-----------AHGGGTAAAA-----AADAPYIHADAMAFGMGCCCLQLTFQARDVAESRYMYDQLAVLSPIMLALSAATPMFRGRLADTDVRWDVISASVDDRTPAERGI------ATGGDGDERMAGRGVRQQPKSRYASISTFIHQCQRK 373
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BLAST of mRNA_H-elongata_contig80005.15656.1 vs. uniprot
Match: A0A7S2W4S8_9STRA (Glutamate--cysteine ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4S8_9STRA)

HSP 1 Score: 182 bits (462), Expect = 2.920e-50
Identity = 102/198 (51.52%), Postives = 120/198 (60.61%), Query Frame = 1 
Query:    1 LQARRGHNVDIRIPLFRDKDTPEFRGEE-AYLPPPLGAASSGCAKSSPVPEETATA-------------------------PHVHMDAMAFGMGCCCLQVTFQARDIDESRFMYDQLAVLSPVMLALTAATPVLKGRLVDTDVRWNTIALSVDDRTLAERGLMDHDPVAKEAAKDPSMVSGGIGRLRKSRYDSISTYL 516
            +++RRG  VDIR+PLFRD  TPEF     A  PPP   A    A+ +P P                               P VHMDAMAFGMGCCCLQVTFQ+RD+ ESR++YDQLA L+P++LALTAATP+ KGRL+D+D RW  IA SVDDRT AERG+         A  DP M  GG  R+ KSRYDSIS YL
Sbjct:  194 IRSRRGSTVDIRVPLFRDFATPEFAASSLADKPPPSAIAVPPRAQDTPTPLAPXXXXXXAASPSLDFSSPRGYMAGWPVDWPEVHMDAMAFGMGCCCLQVTFQSRDVVESRWLYDQLAGLTPILLALTAATPIAKGRLLDSDARWAIIAQSVDDRTDAERGI------DAAAPPDPQMAGGGTRRIHKSRYDSISCYL 385
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BLAST of mRNA_H-elongata_contig80005.15656.1 vs. uniprot
Match: A0A7S3W722_EMIHU (Glutamate--cysteine ligase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3W722_EMIHU)

HSP 1 Score: 176 bits (446), Expect = 6.870e-50
Identity = 95/172 (55.23%), Postives = 116/172 (67.44%), Query Frame = 1 
Query:    1 LQARRGHNVDIRIPLFRDKDTPEFRGEEAYLPPPLGAASSGCAKSSPVPEETATAPHVHMDAMAFGMGCCCLQVTFQARDIDESRFMYDQLAVLSPVMLALTAATPVLKGRLVDTDVRWNTIALSVDDRTLAERGLMDHDPVAKEAAKDPSMVSGGIGRLRKSRYDSISTYL 516
            ++ RRG  VDIR+P F D+ TP F    A  PPP   A            E      V+MDAMAFGMGCCCLQVTFQ R++ ESR ++DQLAVL+PVMLALTAATP+ +G L++TDVRW+ IA SVDDRT AERG+ D       AA+ P M  GG+ RL KSRYDSIS+++
Sbjct:  118 IRRRRGSKVDIRMPRFADEKTPAFE-RHAGCPPPETRA------------EALQMEEVYMDAMAFGMGCCCLQVTFQTRNVAESRHLFDQLAVLAPVMLALTAATPIARGVLLNTDVRWDIIAQSVDDRTPAERGMDDG------AARHPEMAGGGVKRLPKSRYDSISSFI 270
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80005.15656.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJD4_ECTSI2.370e-8975.53Glutamate--cysteine ligase n=1 Tax=Ectocarpus sili... [more]
A0A836CE91_9STRA4.200e-7265.43Glutamate--cysteine ligase n=1 Tax=Tribonema minus... [more]
A0A7S3HD86_9STRA7.500e-6156.25Glutamate--cysteine ligase (Fragment) n=1 Tax=Spum... [more]
A0A7S2SFD3_9STRA3.990e-5557.30Glutamate--cysteine ligase n=1 Tax=Rhizochromulina... [more]
A0A482SUB9_9ARCH1.400e-5451.93Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7R9U411_9STRA1.570e-5254.17Glutamate--cysteine ligase n=1 Tax=Pinguiococcus p... [more]
A0A7S3XQT3_HETAK1.160e-5154.24Glutamate--cysteine ligase n=1 Tax=Heterosigma aka... [more]
A0A835ZCQ8_9STRA4.300e-5154.49Glutamate--cysteine ligase n=1 Tax=Tribonema minus... [more]
A0A7S2W4S8_9STRA2.920e-5051.52Glutamate--cysteine ligase n=1 Tax=Rhizochromulina... [more]
A0A7S3W722_EMIHU6.870e-5055.23Glutamate--cysteine ligase n=1 Tax=Emiliania huxle... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80005contigH-elongata_contig80005:842..2844 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score287.3
Seed ortholog evalue5.2e-75
Seed eggNOG ortholog2880.D8LJD4
Preferred nameGCLC
KEGG rclassRC00064,RC00090
KEGG koko:K11204
KEGG ReactionR00894,R10993
KEGG Pathwayko00270,ko00480,ko01100,ko04212,ko04216,map00270,map00480,map01100,map04212,map04216
KEGG ModuleM00118
GOsGO:0000096,GO:0000166,GO:0000287,GO:0000302,GO:0000303,GO:0000305,GO:0000902,GO:0000904,GO:0001101,GO:0001678,GO:0002009,GO:0002165,GO:0003008,GO:0003013,GO:0003018,GO:0003254,GO:0003674,GO:0003824,GO:0004357,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006082,GO:0006355,GO:0006518,GO:0006520,GO:0006534,GO:0006536,GO:0006575,GO:0006732,GO:0006749,GO:0006750,GO:0006766,GO:0006767,GO:0006790,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006857,GO:0006915,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007275,GO:0007346,GO:0007399,GO:0007409,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0007568,GO:0007584,GO:0008015,GO:0008150,GO:0008152,GO:0008219,GO:0008637,GO:0009058,GO:0009064,GO:0009069,GO:0009266,GO:0009408,GO:0009410,GO:0009605,GO:0009612,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010468,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0010941,GO:0012501,GO:0014070,GO:0014823,GO:0015711,GO:0015833,GO:0016043,GO:0016595,GO:0016597,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0017109,GO:0019184,GO:0019219,GO:0019222,GO:0019725,GO:0019748,GO:0019752,GO:0019852,GO:0022008,GO:0023051,GO:0023057,GO:0030030,GO:0030154,GO:0030162,GO:0030182,GO:0030435,GO:0030554,GO:0030587,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031406,GO:0031667,GO:0032268,GO:0032269,GO:0032270,GO:0032354,GO:0032434,GO:0032436,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032868,GO:0032869,GO:0032870,GO:0032989,GO:0032990,GO:0032991,GO:0033500,GO:0034097,GO:0034284,GO:0034635,GO:0034641,GO:0034698,GO:0035107,GO:0035114,GO:0035120,GO:0035150,GO:0035220,GO:0035239,GO:0035295,GO:0035690,GO:0035728,GO:0035729,GO:0036094,GO:0042176,GO:0042221,GO:0042391,GO:0042398,GO:0042493,GO:0042542,GO:0042592,GO:0042593,GO:0042886,GO:0042939,GO:0042981,GO:0043043,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0043436,GO:0043523,GO:0043524,GO:0043531,GO:0043603,GO:0043604,GO:0043648,GO:0043934,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044344,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0044752,GO:0045454,GO:0045732,GO:0045862,GO:0045892,GO:0045934,GO:0046677,GO:0046685,GO:0046686,GO:0046688,GO:0046872,GO:0046937,GO:0046938,GO:0046982,GO:0046983,GO:0048037,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048569,GO:0048583,GO:0048585,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048878,GO:0050662,GO:0050789,GO:0050794,GO:0050801,GO:0050865,GO:0050866,GO:0050880,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051409,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0051881,GO:0051900,GO:0055082,GO:0060255,GO:0060429,GO:0060548,GO:0060562,GO:0061136,GO:0061564,GO:0061687,GO:0065007,GO:0065008,GO:0070555,GO:0070848,GO:0070887,GO:0071214,GO:0071229,GO:0071230,GO:0071241,GO:0071248,GO:0071260,GO:0071276,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071363,GO:0071371,GO:0071372,GO:0071375,GO:0071407,GO:0071417,GO:0071495,GO:0071496,GO:0071585,GO:0071702,GO:0071704,GO:0071705,GO:0071774,GO:0071840,GO:0072337,GO:0072348,GO:0080090,GO:0090066,GO:0090702,GO:0097066,GO:0097067,GO:0097068,GO:0097069,GO:0097159,GO:0097237,GO:0097367,GO:0097501,GO:0098754,GO:0098849,GO:0099120,GO:0104004,GO:0120036,GO:0120039,GO:1901214,GO:1901215,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901800,GO:1902494,GO:1902679,GO:1903050,GO:1903052,GO:1903320,GO:1903321,GO:1903362,GO:1903364,GO:1903506,GO:1903507,GO:1904386,GO:1904387,GO:1990170,GO:1990748,GO:2000058,GO:2000060,GO:2000112,GO:2000113,GO:2000489,GO:2000490,GO:2001141,GO:2001233,GO:2001234,GO:2001236,GO:2001237
EggNOG free text desc.glutamate-cysteine ligase activity
EggNOG OGsKOG3754@1,KOG3754@2759
EC6.3.2.2
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons4
Model size585
Cds size585
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80005.15656.1prot_H-elongata_contig80005.15656.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig80005 842..2844 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931206.0670452-CDS-H-elongata_contig80005:841..10031622931206.0670452-CDS-H-elongata_contig80005:841..1003Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80005 842..1003 -
1691679741.1558387-CDS-H-elongata_contig80005:841..10031691679741.1558387-CDS-H-elongata_contig80005:841..1003Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80005 842..1003 -
1622931206.0867298-CDS-H-elongata_contig80005:1784..19761622931206.0867298-CDS-H-elongata_contig80005:1784..1976Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80005 1785..1976 -
1691679741.1782162-CDS-H-elongata_contig80005:1784..19761691679741.1782162-CDS-H-elongata_contig80005:1784..1976Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80005 1785..1976 -
1622931206.102224-CDS-H-elongata_contig80005:2502..25921622931206.102224-CDS-H-elongata_contig80005:2502..2592Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80005 2503..2592 -
1691679741.1895928-CDS-H-elongata_contig80005:2502..25921691679741.1895928-CDS-H-elongata_contig80005:2502..2592Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80005 2503..2592 -
1622931206.1173306-CDS-H-elongata_contig80005:2703..28441622931206.1173306-CDS-H-elongata_contig80005:2703..2844Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80005 2704..2844 -
1691679741.1987922-CDS-H-elongata_contig80005:2703..28441691679741.1987922-CDS-H-elongata_contig80005:2703..2844Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80005 2704..2844 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig80005.15656.1

>prot_H-elongata_contig80005.15656.1 ID=prot_H-elongata_contig80005.15656.1|Name=mRNA_H-elongata_contig80005.15656.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=195bp
LQARRGHNVDIRIPLFRDKDTPEFRGEEAYLPPPLGAASSGCAKSSPVPE
ETATAPHVHMDAMAFGMGCCCLQVTFQARDIDESRFMYDQLAVLSPVMLA
LTAATPVLKGRLVDTDVRWNTIALSVDDRTLAERGLMDHDPVAKEAAKDP
SMVSGGIGRLRKSRYDSISTYLHYCKRRAENPMHVLEVGVSRMF*
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mRNA from alignment at H-elongata_contig80005:842..2844-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig80005.15656.1 ID=mRNA_H-elongata_contig80005.15656.1|Name=mRNA_H-elongata_contig80005.15656.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2003bp|location=Sequence derived from alignment at H-elongata_contig80005:842..2844- (Himanthalia elongata Himel1 dioecious)
TTGCAGGCTAGGCGGGGCCATAATGTCGATATCAGAATCCCTCTTTTCCG
AGACAAGGACACCCCGGAGTTCCGAGGCGAGGAGGCGTATCTGCCACCCC
CCCTCGGCGCCGCTTCCAGCGGGTGTGCCAAAAGCAGTCCGGTGCTTATC
AACGGGGGCGACGCCCGAAGGCGGCTTGAGTCGCTGGACGAAACGAAGGC
GGTGGACGGAGTTTCTGCTGTAATCAAAGGCGTTTCTTCAGAGGTCACAA
AGGTACCGGAAGAAACGGCGACGGCCCCCCACGTCCACATGGACGCCATG
GCGTTCGGTATGGGGTGCTGCTGCCTGCAGGTTACCTTCCAGGTATGATG
GGTATTGATGCATTGTGCTTCGATTTATGTGCTCTGTGCCCTAACACTTG
TGGCATTTTGGGAGTTACTTTCCTGCAAGCCGCGCGGCAAAGGGGACAGG
GAGTGAGGGGAAAGGTAGGAGCGGGGTGTGCTCGATCACGCTAAATGAGA
TATATAGAAATTTTCCATCACCACCACCCTCCTACTTTTAAATGTTTTAT
TAGAGACAGAGGCGCGCATAATTTTTATGTGCTTGAAGTCCATGTTCGAC
TCTTCCTTAACTCTACAGAAATAATTACATTATAAAGAAAATATACGCCT
CTTCGGGGTTACCACTCCCAAAACGTTTGACGGGGGGTTTTTGGAGAAAA
CAGCAACAAAAATCTTCACATGAGAGAGAAAGAGACAGACAGACAGAAAC
AAACAAAAATGGAAGGAATCAGAAGAAAAAAATGAGAAGAAAATACGGAG
TTGATCAGCATCAGCCGAAGTACCCGTGGCGCGTCGCACGCCCCCACACA
CCCGACCGCAACGGGCAGGCTCGCGACATCGACGAGTCACGCTTCATGTA
CGACCAACTGGCCGTGCTGAGCCCTGTTATGCTGGCGCTGACAGCCGCGA
CGCCCGTGCTGAAAGGCCGCCTCGTTGACACGGATGTGAGGTGGAACACC
ATCGCGCTCTCCGTCGACGACCGCACGCTAGCGGAGCGCGGCCTGATGGA
CCATGACCCGGTGAGAAAGGGAGCGCCTCCTTCGCCTCGGCACTGACGTT
AACCTTACCGTTACCATTACCGAAGTGTCGCTTTTGTTTTTCCCTTTCGC
GCATGTATATATCTGTACATGTGTGTGTGTGTGTGTGTGTGTACAAATGT
ATGCCTACATGTTTGTCTGTGCTTCCTTCTTGTGTCTTCTATGAGGCTTC
TATGAGGAACCCCCGTCAGTGCGTGCATGCCTCTCTATTGGGGGTGGGGG
GGGGATGTTCACTTGAGGTCGGAGCGAAATCGGGTTAGAATCCGTGAAGG
AGTTGCAGAATGACACGGTCAAATCAGTATCGCTTTCTCGAGCCGCAAGA
GCTTTCCCCTGTACTGTACGGCCAATGGGATAGCGACGATGGGAAAGTGG
ATGGGGAGGGGGGGTGAGGTGGTGAGAGGGGGCGTATGGTTTACAGTCCT
GCCAACGGTGACGCTCGTCTCGGGTCACGACCGCAGCAAAACGGAATGTT
GTCTAATTCGTCGAAATATCAAAATGCTGGGAGGGGGTGTGGAGTAGGGA
AGAGGGGACGGGCAGGCTGGGAGCCAGCGCTACGTGCTTATGCGTATTTT
TTTTGTGTGTGTGTGTTTCCCGCTTTGTCGTAACCGTTTTCTTTTCTTTT
CTTTTCTTTCTTCTTTTGGTGTTGTGGTTGTTGTTGATTTTTTTGCTTAT
CCTTTCAGTTTTTCTTGTTCCTCCGAAAACGCGGACGCGTCTGTAACCGC
GATTTTTATGCATCCACCCGACCGGTCTTACCGTTTCGAAGGTCGCCAAG
GAAGCAGCGAAGGATCCGTCCATGGTCAGCGGAGGGATCGGTCGGTTAAG
GAAAAGCCGCTACGACAGCATCTCGACGTACCTGCACTATTGCAAACGAA
GGGCGGAGAACCCCATGCACGTGCTCGAGGTGGGCGTATCGCGTATGTTT
TGA
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Coding sequence (CDS) from alignment at H-elongata_contig80005:842..2844-

>mRNA_H-elongata_contig80005.15656.1 ID=mRNA_H-elongata_contig80005.15656.1|Name=mRNA_H-elongata_contig80005.15656.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1170bp|location=Sequence derived from alignment at H-elongata_contig80005:842..2844- (Himanthalia elongata Himel1 dioecious)
TTGCAGGCTAGGCGGGGCCATAATGTCGATATCAGAATCCCTCTTTTCCG
AGACAAGGACACCCCGGAGTTCCGAGGCGAGGAGGCGTATCTGCCACCCC
CCCTCGGCGCCGCTTCCAGCGGGTGTGCCAAAAGCAGTCCGTTGCAGGCT
AGGCGGGGCCATAATGTCGATATCAGAATCCCTCTTTTCCGAGACAAGGA
CACCCCGGAGTTCCGAGGCGAGGAGGCGTATCTGCCACCCCCCCTCGGCG
CCGCTTCCAGCGGGTGTGCCAAAAGCAGTCCGGTACCGGAAGAAACGGCG
ACGGCCCCCCACGTCCACATGGACGCCATGGCGTTCGGTATGGGGTGCTG
CTGCCTGCAGGTTACCTTCCAGGTACCGGAAGAAACGGCGACGGCCCCCC
ACGTCCACATGGACGCCATGGCGTTCGGTATGGGGTGCTGCTGCCTGCAG
GTTACCTTCCAGGCTCGCGACATCGACGAGTCACGCTTCATGTACGACCA
ACTGGCCGTGCTGAGCCCTGTTATGCTGGCGCTGACAGCCGCGACGCCCG
TGCTGAAAGGCCGCCTCGTTGACACGGATGTGAGGTGGAACACCATCGCG
CTCTCCGTCGACGACCGCACGCTAGCGGAGCGCGGCCTGATGGACCATGA
CCCGGCTCGCGACATCGACGAGTCACGCTTCATGTACGACCAACTGGCCG
TGCTGAGCCCTGTTATGCTGGCGCTGACAGCCGCGACGCCCGTGCTGAAA
GGCCGCCTCGTTGACACGGATGTGAGGTGGAACACCATCGCGCTCTCCGT
CGACGACCGCACGCTAGCGGAGCGCGGCCTGATGGACCATGACCCGGTCG
CCAAGGAAGCAGCGAAGGATCCGTCCATGGTCAGCGGAGGGATCGGTCGG
TTAAGGAAAAGCCGCTACGACAGCATCTCGACGTACCTGCACTATTGCAA
ACGAAGGGCGGAGAACCCCATGCACGTGCTCGAGGTGGGCGTATCGCGTA
TGTTTTGAGTCGCCAAGGAAGCAGCGAAGGATCCGTCCATGGTCAGCGGA
GGGATCGGTCGGTTAAGGAAAAGCCGCTACGACAGCATCTCGACGTACCT
GCACTATTGCAAACGAAGGGCGGAGAACCCCATGCACGTGCTCGAGGTGG
GCGTATCGCGTATGTTTTGA
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