mRNA_H-elongata_contig80.15655.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-elongata_contig80.15655.1
Unique Name	mRNA_H-elongata_contig80.15655.1
Type	mRNA
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)

Homology

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BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 1.070e-13
Identity = 43/96 (44.79%), Postives = 59/96 (61.46%), Query Frame = 1

Query:   10 LRKVVFIGQSGAGKTSLIKSIKAGEG--QLALEKELESVGVSVQDHMFENRHKGDTHVKLYDLAGQVEYYGLYQLFITERAVYVLVWDAFRFMDQT 291
            L KVV +G S AGKTSL+ SI  G G   +    E+ +VG+ +  H  +      T V+ YD AGQV+YYG++Q F+T RA+Y+LVWD  R   +T
Sbjct:  223 LLKVVLVGSSQAGKTSLVNSIVEGRGLPTVGTPAEVSTVGIELLRHNLQG-----TAVEFYDCAGQVDYYGMHQNFLTRRALYLLVWDVLRCHGKT 313

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BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 2.000e-13
Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = 1

Query:    7 DLRKVVFIGQSGAGKTSLIKSI--KAGEGQLALEKELESVGVSVQDHMFENRHKGDTHVKLYDLAGQVEYYGLYQLFITERAVYVLVWDAFR 276
            ++ KVV IG  GAGKTSL+ SI  + G   +   +E+ +VG+ ++ H      +    V+ YD AGQV+YYG++Q F+T RA+Y+LVWD  R
Sbjct:  383 NVLKVVLIGSPGAGKTSLLNSIVNERGSRTVGTSEEVSTVGIELRRH----HQRNGRIVEFYDCAGQVDYYGMHQTFLTRRALYLLVWDVSR 470

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BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: A0A6H5JRW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW5_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 5.030e-13
Identity = 45/88 (51.14%), Postives = 58/88 (65.91%), Query Frame = 1

Query:   16 KVVFIGQSGAGKTSLIKSIKAGEGQLALEKELES-VGVSVQDHMFENR-HKGDTH-VKLYDLAGQVEYYGLYQLFITERAVYVLVWDA 270
            KVV +G    GKTSL  SIKAG+  +     ++S V V VQDH  + + HK   H ++++D AGQ  YYGL QLF+T RAVY+LVWDA
Sbjct:   70 KVVIVGMETVGKTSLRCSIKAGKPCMTRGGGVDSTVHVDVQDHNLDVQDHKAGGHPIRIFDCAGQAAYYGLLQLFLTPRAVYLLVWDA 157

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BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 4.530e-12
Identity = 45/87 (51.72%), Postives = 56/87 (64.37%), Query Frame = 1

Query:   16 KVVFIGQSGAGKTSLIKSIKAGEGQLALEKELES-VGVSVQDHMFENRHKGDTH-VKLYDLAGQVEYYGLYQLFITERAVYVLVWDA 270
            KVV IG+   GKTSL +SI  G   +     +ES V V V+DH      K D H ++++D AGQV YYGL QLF+T RAVY+LVWDA
Sbjct:  450 KVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDH------KVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDA 530

[Close]

BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 4.540e-12
Identity = 45/87 (51.72%), Postives = 56/87 (64.37%), Query Frame = 1

Query:   16 KVVFIGQSGAGKTSLIKSIKAGEGQLALEKELES-VGVSVQDHMFENRHKGDTH-VKLYDLAGQVEYYGLYQLFITERAVYVLVWDA 270
            KVV IG+   GKTSL +SI  G   +     +ES V V V+DH      K D H ++++D AGQV YYGL QLF+T RAVY+LVWDA
Sbjct:  543 KVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDH------KVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDA 623

[Close]

BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 8.410e-12
Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 1

Query:   16 KVVFIGQSGAGKTSLIKSIKAGEGQLALEKELES-VGVSVQDHMFENRHKGDTHVKLYDLAGQVEYYGLYQLFITERAVYVLVWDA 270
            KVV +G+   GKTSL +SIK G+  +      ES V V V+DH  +        ++++D AGQV YYGL QLF+T RAVY+LVWDA
Sbjct:  378 KVVIVGKETVGKTSLRRSIKTGKPCMTRGGGEESTVHVDVEDHDLDGHP-----IRMFDCAGQVVYYGLLQLFLTPRAVYLLVWDA 458

[Close]

BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: A0A6H5JQZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ5_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 3.310e-10
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 1

Query:   16 KVVFIGQSGAGKTSLIKSIKAGEGQLALEKELES-VGVSVQDHMFENR-HKGDTH-VKLYDLAGQVEYYGLYQLFITERAVYVLVWDA 270
            KVV +G    GKTS    IKAG+  +     ++S V V V+DH  + + HK   H ++++D AGQ  YYGL QLF+T RAVY+LVWDA
Sbjct:  236 KVVIVGTETVGKTS----IKAGKPCMTRGGGVDSTVHVDVEDHNLDVQDHKAGGHPIRIFDCAGQAAYYGLLQLFLTPRAVYLLVWDA 319

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BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 4.810e-10
Identity = 45/93 (48.39%), Postives = 57/93 (61.29%), Query Frame = 1

Query:   16 KVVFIGQSGAGKTSLIKSIKAGEGQLALE-KELESVGVSVQDHMFENRHKGDTHVKLYDLAGQVEYYGLYQLFITERAVYVLVWDAFRFMDQT 291
            KVV +GQ GAGKTSL +S+KA E     E KE  +V   V+    E      + V++YD AGQV Y GL Q+F+T RAV VLV +A +F  QT
Sbjct:  195 KVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEAMELEG-----SSVRVYDCAGQVAYTGLLQMFLTPRAVCVLVCNAGKFGQQT 282

[Close]

BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.070e-8
Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 1

Query:    7 DLRKVVFIGQSGAGKTSLIKSIKAGEGQLA--LEKELESVGVSVQDHMFENRHKGDTHVKLYDLAGQVEYYGLYQLFITERAVYVLVWD 267
             L KVV +G + AGKTSL+ SI AG G        +  +VG+ ++    +     DT V+ +D AGQV+Y G++Q F+T RA+Y+LV D
Sbjct:   69 QLLKVVLVGSASAGKTSLMHSIIAGRGSPTEGTPAQASTVGMELRPCQLQ-----DTKVEFFDCAGQVDYAGMHQTFLTRRALYLLVVD 152

[Close]

BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 1.500e-8
Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = 1

Query:   16 KVVFIGQSGAGKTSLIKSIKAGEGQLALE-KELESVGVSVQDHMFENRHKGDTHVKLYDLAGQVEYYGLYQLFITERAVYVLVWDAFRFMDQ 288
            K++ +GQ GAGKTSL KS+KA E     E KE  +V   V+    E      + +++YD AGQV Y GL Q+F+T RAV V+V +A  F  Q
Sbjct:  338 KIILVGQEGAGKTSLRKSMKAKEATPTGEWKEESTVFADVERMELEG-----SSIRVYDCAGQVAYTGLLQMFLTPRAVCVIVCNAESFGQQ 424

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot

BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JW02_9PHAE	1.070e-13	44.79	Roc domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D7FVX5_ECTSI	2.000e-13	43.48	LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s...	[more]
A0A6H5JRW5_9PHAE	5.030e-13	51.14	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FX56_ECTSI	4.530e-12	51.72	LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s...	[more]
D7FX69_ECTSI	4.540e-12	51.72	LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s...	[more]
D7FJV1_ECTSI	8.410e-12	48.84	LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s...	[more]
A0A6H5JQZ5_9PHAE	3.310e-10	47.73	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KSZ8_9PHAE	4.810e-10	48.39	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K8T1_9PHAE	1.070e-8	41.57	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FUD0_ECTSI	1.500e-8	44.57	LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig80	contig	H-elongata_contig80:3538..7348 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	78.6
Seed ortholog evalue	1.8e-12
Seed eggNOG ortholog	2880.D7FVX5
Preferred name	SLITRK2
GOs	GO:0000902,GO:0000904,GO:0005575,GO:0005623,GO:0005886,GO:0007275,GO:0007399,GO:0007409,GO:0008150,GO:0009653,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0022008,GO:0030030,GO:0030154,GO:0030182,GO:0031175,GO:0031224,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0044087,GO:0044089,GO:0044425,GO:0044464,GO:0048468,GO:0048518,GO:0048522,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051960,GO:0051962,GO:0051963,GO:0051965,GO:0061564,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0120036,GO:0120039,GO:2000026
EggNOG free text desc.	positive regulation of synapse assembly
EggNOG OGs	2CMPC@1,2QR6C@2759
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Exons	2
Model size	293
Cds size	291
Stop	0
Start	0

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622931205.7053654-CDS-H-elongata_contig80:3537..3593	1622931205.7053654-CDS-H-elongata_contig80:3537..3593	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig80 3538..3593 +
1691679741.134499-CDS-H-elongata_contig80:3537..3593	1691679741.134499-CDS-H-elongata_contig80:3537..3593	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig80 3538..3593 +
1622931205.944698-CDS-H-elongata_contig80:7111..7346	1622931205.944698-CDS-H-elongata_contig80:7111..7346	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig80 7112..7346 +
1691679741.1453872-CDS-H-elongata_contig80:7111..7346	1691679741.1453872-CDS-H-elongata_contig80:7111..7346	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig80 7112..7346 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig80.15655.1	prot_H-elongata_contig80.15655.1	Himanthalia elongata Himel1 dioecious	polypeptide	H-elongata_contig80 3538..7346 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-elongata_contig80:3538..7348+
coding sequence from alignment at H-elongata_contig80:3538..7348+

protein sequence of mRNA_H-elongata_contig80.15655.1

>prot_H-elongata_contig80.15655.1 ID=prot_H-elongata_contig80.15655.1|Name=mRNA_H-elongata_contig80.15655.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=97bp
IFDLRKVVFIGQSGAGKTSLIKSIKAGEGQLALEKELESVGVSVQDHMFE
NRHKGDTHVKLYDLAGQVEYYGLYQLFITERAVYVLVWDAFRFMDQT

mRNA from alignment at H-elongata_contig80:3538..7348+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-elongata_contig80.15655.1 ID=mRNA_H-elongata_contig80.15655.1|Name=mRNA_H-elongata_contig80.15655.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3811bp|location=Sequence derived from alignment at H-elongata_contig80:3538..7348+ (Himanthalia elongata Himel1 dioecious)
ATTTTCGACTTGCGCAAGGTTGTGTTCATCGGACAAAGCGGAGCTGGCAA
GACTAGGTGCGATCAATCATGATGGAATACAAGAGATCAACCTGGGCTGA
GCGAATGAGCAGGCTGACGCGGGACGGGACGGCCGAACCCCGAGGTCAAA
GTTTAAGGTGCTAACGGCGATAGAGAAATTTTATTTTCCCTTTTTATCAA
TTTTACATTAAACCGTGCAAACCGGTTTGCAAATACCCCCCCCCCTTATG
AGGAGCTATCCCTGGGGCCCTGTTCAGCTGACCAAAAACAGGAAGCAACA
TCATTCGGTTTATCTTTACTCCGCTATACGTGATGACCACACGCACACTA
ATAGCTAACTTAGTTACCACTACTAAGTCGACGATTAATCTTATAGTAGA
AAATTCATAGGATAAATATGACATGATAGCGCTTGCTGATAAACGATAAC
GTCGTTGTCATGGAGGTGAAACTGGAGTGAAGGTGTAATGAATGACAAAA
GTATGATGATGAGTTGAGTAACTTGTAGCCAGCAGCAGACCCAATTCTAG
TAGGACTAGATGGCGTCACGACAGCGGTGTTGCGCGATCAGAATGTTGTG
TGCCGGATCCACCAAAAAAACCCCGCACATAACTGACCCTGGTTCATATC
GACTACGGCAAAATATTTCATCGTAGATGAGGCTGTTTTCGAGCTTAACT
TGACTGCCGCATCGACACTGTGGCCCTAAATCCTGCTACTGCCACAGGAC
ATGTTACTGTTACAGCTGCAATTACTTCGAAAGCTGATAGGCGTGACGAT
ATCATTGAATTGGGCTTCTTCCAACGCCATGCGCATGTTTTCGAATTTCT
TTTGTTTCATTCGAAGCCGTATCAAATAGTCTCAAAAGACAGCGTATGGC
CGAAGCGAACGACCACAGTCGTCAATCGGAGGTACTTCGGCGTTTACTTT
TAAATGGTTGATTGAATTCTCACATAAGCTAATGTCAAAATATAGCTCGT
GGTCATATGGTAGGAAAAATACCATCCGGAAGGAAAAAACGTTCAACGTA
TTCTCCAATACAAAGGAAACGGCAATGGTGCATAATACAAATGTTGGGAA
AAAGCGAACACAAAAATCTTTGAGGTCTTCAAGAAAACACCCCATCCACT
CTTTTTCCTGCCCCCTCACCCAGCCCGCGTCCCCCACGATTTCTCTGAAC
ACCACACACTTCGGCTGTCTCGTGTCGTCCATGCGCGCCACTAATCCCGC
GAACATGATCCACCTCCTGCGACTGATCATATCGTTGCTTTCGCTTCCCG
TCTTTATGACGGTGTCCATATAGGAGATCGGCTGATCGGTACGATTGCAC
TTTCGTCAACCAATGCTTCGAGTCAAGGACCTGTAGTGGGCTCGGCGCAG
CTTTTTCTAGTGGCTCGTGCGCGGGGTCCACGCTACGCAGCCGTACAGCG
TTGACTCGAGTACCTCAACTTTTAGCATCCGGATTTGGAGCTCCAGGGGG
GCGCTGGGTCGGTCGTACAGTTCGCGGGTGTACGTCCGGAAGCTGCACGA
AGCGTTGCGTGTGCGTCTATTGATCTCGATGGAAAGGGCGGCTTTATGGT
GGACGTTCCCCCCGAGGTATACAAACTCGTTCGTTTGGTGGTACGTTACT
CATACTACCTTGAGGACTGCTGACCCAGTGCCGGTGGACTCTCGGTAGTA
AACGCCATCGGTACGCAATTGCGTGGCCTGCTGAAATCGGGATTGACCCG
ATGGCGGTTGACGGTAGAGAAGGACGTCATCGCGGAAAACAGGAAGATTG
AGAGGATCCCGGGAGTAAGCACCAATTTCAGCCAGGGTTGAGCGACCGAG
CAGGCTGACGCAGGACGTAACTGCTATACCCGTCTCGCGAGACTATATTC
TCAAGCGCGAAAGGGGACAGGGAAAGCTTATTTTCCTTGTTCAGTTGACC
ACAAGCAGAAGGCAACAAAATCCGGTTGATCTTACTCTGGTAAATGTGTG
ACCATCCATGCACCTGGTCTGCTGCTTCTACGCAGAATGTGGCGGTGGCC
TCCGGCATCTCCTTCTTGCGTAAACACATGATCTCAGGCTTGGCCACCGA
TAGGTGAGAGACCAAACGCTGCGTAAACTACCACAATCACGCCCATCATT
TTCCTAATCTGCTCGGGCATTTGCGAGACGACTCTAGCATCGTCATCGTA
TAGCATACCCCACTGCCAGATCGTCAGGGCTACTTAATCCCCGGTGGTTG
CTACCCCCCGCCTTCCCACGCTCGTTTTTTTCCTGAAGTGCACCAGAGCG
TCCATGGTGTTGCTATCTGCCTTGAAGCGCGGGTCGACCGTGTTAATTAC
CGCCGCAAAGAAGATAATAAAAAACGATAGAAGAAAGCACACAGCCTTGA
CGAAGGCCCTGTTCTACAGCAAACCACCGCGAGCAAACACCGTTATCGAA
CCGGATACATTATATTTTTTATTGAGTTCTCACATAAGCTGATCTCAAAA
ATCCAGCCCGTGGTCGCAAGGTCGAAAAACCACCAATTGGAAGGATAAAC
GCATACTCTCTAATATACGGAAAGGAAACGGCAACTGGTGCATAATACAA
AAACCACGAAAAAAGCGACATCTCCAAAGAAAAAGAAACACAAAAATGGG
AACACGAACAGTTGTTAACGAACTGCGTGTGGCTGTTGGCACGCTGGTGT
ACCGAAGAATGATTGAACAAAGAGCAATGGGTGTAATGAAAGCAAAAAAA
GGCAATACGAAATAAAAAAACAGGTAAAAAAAAGTAACGCCTAAAAAAGG
CAATATGGCATCGGCAAGAAGAAAACGCTCGGGGGATAGGTTCGCGAATG
ATGATGAGAGTTGCTTACATATCATCATAAAATTGACGACTGAGATCATA
TTTCTTGGCACGCCAAAACGGGCAAGTACTGTCCAGAGGAAGTTTCGGTC
AACAGGATCGTATGCTTTGGTAAGGCCTATAAAGCGTACATAGAACGGGA
TCCGGTTCTTCCGCGCCAACTCCTTTAGTCGATTGTGGGAATGTGATGCA
CGAGATCTTATTTTCACTTTTGGTCTCCACCTCCGCTACACTTTCCTCTT
TTGCTAGGCAGGCGGCTTTCCCTGCCACTAATCGATCTACACGGTGATGC
CATTGTCGTGTTTCCCATCATCCTTAGAGTTGCGCATTGCATTTGCACCG
TTTCCTCATAGCGGTCACGGGGAACTACATTGTTTATATTTTTGCTCCAC
TACTGACGTTCGTCCGGGAAGCTTGAGAGTGCCCAAAAAGGTTCAAGGTT
ATGGGTAACCATAGCTAATGGCCCACGCATTTTCATTGTGAACCATTCTA
TTTAATTGAAGCGCATTGTTTGCCTCGGGCGGAAATGATCAATCTGTACT
CATTGTTGTTTCCTGACGTCTACTGAGTTTTCCTAAGCTTGCTGGGTTCA
TTCGATCACATTCGTCAAAAGCTTCAGAAGACATCTGACCAGGTGCATTT
TGTTCAAACGTTTTTCATGGTAGATGCAATGTTGTTTTTGTGATGTACAC
GATGATTCCAACGTCAGTCGAAAGTCTGATCAAGAGCATCAAGGCCGGGG
AGGGGCAACTGGCGCTTGAGAAAGAACTCGAATCTGTGGGAGTGTCAGTT
CAGGATCACATGTTTGAGAATAGGCATAAGGGCGACACCCACGTGAAGCT
TTACGACCTGGCAGGTCAAGTGGAATACTACGGTCTGTACCAATTATTCA
TAACGGAGAGGGCTGTTTACGTCCTGGTGTGGGATGCATTTAGGTTTATG
GACCAAACCAA

Coding sequence (CDS) from alignment at H-elongata_contig80:3538..7348+

>mRNA_H-elongata_contig80.15655.1 ID=mRNA_H-elongata_contig80.15655.1|Name=mRNA_H-elongata_contig80.15655.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=582bp|location=Sequence derived from alignment at H-elongata_contig80:3538..7348+ (Himanthalia elongata Himel1 dioecious)
ATTTTCGACTTGCGCAAGGTTGTGTTCATCGGACAAAGCGGAGCTGGCAA
GACTAGATTTTCGACTTGCGCAAGGTTGTGTTCATCGGACAAAGCGGAGC
TGGCAAGACTAGTCTGATCAAGAGCATCAAGGCCGGGGAGGGGCAACTGG
CGCTTGAGAAAGAACTCGAATCTGTGGGAGTGTCAGTTCAGGATCACATG
TTTGAGAATAGGCATAAGGGCGACACCCACGTGAAGCTTTACGACCTGGC
AGGTCAAGTGGAATACTACGGTCTGTACCAATTATTCATAACGGAGAGGG
CTGTTTACGTCCTGGTGTGGGATGCATTTAGGTTTATGGACCAAACCTCT
GATCAAGAGCATCAAGGCCGGGGAGGGGCAACTGGCGCTTGAGAAAGAAC
TCGAATCTGTGGGAGTGTCAGTTCAGGATCACATGTTTGAGAATAGGCAT
AAGGGCGACACCCACGTGAAGCTTTACGACCTGGCAGGTCAAGTGGAATA
CTACGGTCTGTACCAATTATTCATAACGGAGAGGGCTGTTTACGTCCTGG
TGTGGGATGCATTTAGGTTTATGGACCAAACC