prot_H-elongata_contig79991.15653.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig79991.15653.1
Unique Nameprot_H-elongata_contig79991.15653.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length255
Homology
BLAST of mRNA_H-elongata_contig79991.15653.1 vs. uniprot
Match: A0A6H5K899_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K899_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 1.230e-69
Identity = 122/293 (41.64%), Postives = 161/293 (54.95%), Query Frame = 0
Query:    1 ALAEARSHNLRVTTCNDIHSGTENTIYLKFCQGMSN-CTTGESNAYNLDGELKHPGTWSYFDIPLGYEPTTMVVLLSGGDAWCIEEVIWNNSTSLLGRGARIYLDGDKGFRGCNYGVHHQTGRFYPCRDRWRFFNLRGKDGFMNEIAVKQCKENTAS----------------------TAIASLCSESMCSDDVGDVAKFNLTL--------------GRPGNDG-WIKKRVKTTFNPVAMKLRGTGN-PWCANDIAFNDFRLVDHSSLP--VVLSDEKEQFFYSVQMFGEL 252
            A A  +   L V TCN+ ++G+ + ++L FC G  + C  G  N YN   EL   GTW+ F+IPL +EPT M + + G DAWC +EVIWN  T+LLG G R+YLDGD G +GCNYGVH  TG FYPC+  WRFFNL+G D +  EI VK C   T+S                        +ASLCSES C + VG+V    L                 R G+ G W   R   TFNPVAM+L   G+ PWCA ++AFN++ LV+  + P  + L    ++ F++VQ  G L
Sbjct:  127 ATAAIQPFTLEVRTCNETNAGSLDEVHLSFCDGGGDDCVMGPENVYNSVAELAEIGTWTPFEIPLAFEPTAMSMSMVGIDAWCFDEVIWNGGTNLLGSGGRVYLDGDLGKKGCNYGVHFDTGWFYPCQSSWRFFNLQGSDDYEYEIKVKPCGSATSSGXXXXXXXXXXXXXXXXXXXSSRILASLCSESECDETVGEVVNVTLAAEPSHRHGXXXXXXTSRAGSGGDWATTRTPATFNPVAMRLTNVGDFPWCAEEVAFNEYTLVNRFASPHGMKLGVGDDRLFFNVQSLGLL 419          
BLAST of mRNA_H-elongata_contig79991.15653.1 vs. uniprot
Match: D7G1J9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J9_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 6.390e-66
Identity = 124/293 (42.32%), Postives = 162/293 (55.29%), Query Frame = 0
Query:    1 ALAEARSHNLRVTTCNDIHSGTENTIYLKFCQGMSN-CTTGESNAYNLDGELKHPGTWSYFDIPLGYEPTTMVVLLSGGDAWCIEEVIWNNSTSLLGRGARIYLDGDKGFRGCNYGVHHQTGRFYPCRDRWRFFNLRGKDGFMNEIAVKQC---------------------KENTASTAI-ASLCSESMCSDDVGDVAKFNLTLGRPGNDG---------------WIKKRVKTTFNPVAMKLRGTGN-PWCANDIAFNDFRLVDHSSLP--VVLSDEKEQFFYSVQMFGEL 252
            A A  + + L V T N  ++G+ + ++L FC G  + C  G  N YN   EL   GT + F+IPL YEPT M + + G DAWC +E IWN  T+LLG GAR+YLDGD G +GCNYGVH  TG FYPC+ RWRFFNL G D +  EI VK C                     +E++AST I ASLCSES C +  G+V   N+TL      G               W   R   TFNPVAM+L   G+ PWCA ++AFN++ LV+  + P  + L    ++ F++VQ  G L
Sbjct:   43 ATAAIQPYTLEVRTRNATNAGSLDEVHLSFCDGGGDDCVMGPENVYNSMAELAEIGTRATFEIPLAYEPTAMSISIVGIDAWCFDEAIWNGGTNLLGSGARVYLDGDLGEKGCNYGVHFDTGWFYPCQSRWRFFNLPGSDDYEYEIKVKPCDSATPSGSASLSQQEEEAAAVRESSASTKILASLCSESECDETAGEVV--NVTLAAEPAQGXXXXXXXXXXXXXXDWATTRTPATFNPVAMRLTNVGDLPWCAEEVAFNEYTLVNRYASPHGMKLDVGDDRLFFNVQSLGLL 333          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79991.15653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K899_9PHAE1.230e-6941.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1J9_ECTSI6.390e-6642.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79991contigH-elongata_contig79991:889..2693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79991.15653.1mRNA_H-elongata_contig79991.15653.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig79991 889..2693 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig79991.15653.1 ID=prot_H-elongata_contig79991.15653.1|Name=mRNA_H-elongata_contig79991.15653.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=255bp
ALAEARSHNLRVTTCNDIHSGTENTIYLKFCQGMSNCTTGESNAYNLDGE
LKHPGTWSYFDIPLGYEPTTMVVLLSGGDAWCIEEVIWNNSTSLLGRGAR
IYLDGDKGFRGCNYGVHHQTGRFYPCRDRWRFFNLRGKDGFMNEIAVKQC
KENTASTAIASLCSESMCSDDVGDVAKFNLTLGRPGNDGWIKKRVKTTFN
PVAMKLRGTGNPWCANDIAFNDFRLVDHSSLPVVLSDEKEQFFYSVQMFG
ELPR*
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