mRNA_H-elongata_contig79959.15645.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig79959.15645.1
Unique NamemRNA_H-elongata_contig79959.15645.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig79959.15645.1 vs. uniprot
Match: A0A6H5KBF0_9PHAE (Raptor_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF0_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 3.120e-82
Identity = 155/240 (64.58%), Postives = 177/240 (73.75%), Query Frame = 1 
Query:    1 TQYIPLSVHELKSWAGTPTIFVVDCSAAGVLMEHFTQPL--LQPED-DLDVLPVAGVTGTAATGTPSAHNNDSLAPNGGVAPSPKSSVG--RVPSVASSPVGSGGTFAASG---RPLKDIIVLAPCGADEVLPMNADLPADLFTSCLLTPMPIALRWFVRRNKVSWISMEGVDPEWVDKIPGKLTDRQSPLGELHWTFTAIMDAIAWNSLSSTLFQKLFRQDLLVASLFRNFLLADRIMR 696
            TQYIPLS+H+LK WAG P+IFV+DCSAAGVL+ HF +P   + P+D D D     G    A++G        S    G VAPSP SS G    PSVASSP GSGGTF  SG   RPLKD+IV+A CG DEVLP NADLPAD+FT CL TPMP+ALRWF+R+NK   +SM GVDPEWVDKIPG L +R +PLGEL W FTAIMDAIAW++L   LFQKLFR DLLVA LFRNFLLADRI+R
Sbjct:  359 TQYIPLSIHDLKDWAGKPSIFVLDCSAAGVLLPHFEEPTTPVPPQDEDGDEEDGDGRDCGASSGQQDPRQRLSSGGGGSVAPSPVSSCGGRAPPSVASSPAGSGGTFTGSGGRGRPLKDVIVMAACGEDEVLPTNADLPADVFTCCLTTPMPMALRWFIRQNKD--LSMSGVDPEWVDKIPGSLGNRLTPLGELEWIFTAIMDAIAWSTLPLPLFQKLFRGDLLVAKLFRNFLLADRILR 596
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BLAST of mRNA_H-elongata_contig79959.15645.1 vs. uniprot
Match: D7FIL6_ECTSI (Raptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIL6_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 3.970e-76
Identity = 142/226 (62.83%), Postives = 163/226 (72.12%), Query Frame = 1 
Query:    1 TQYIPLSVHELKSWAGTPTIFVVDCSAAGVLMEHFTQPL--LQPED-DLDVLPVAGVTGTAATGTPSAHNNDSLAPNGGVAPSPKSSVG--RVPSVASSPVGSGGTFAASG---RPLKDIIVLAPCGADEVLPMNADLPADLFTSCLLTPMPIALRWFVRRNKVSWISMEGVDPEWVDKIPGKLTDRQSPLGELHWTFTAIMDAIAWNSLSSTLFQKLFRQDLLVA 654
            TQYIPLS+H+LK WAG P+IFV+DCSAAGVL+ HF +P   + P+D D D          A++G        S    G VAPSP SS G    PSVASSP GSGGTF  SG   RPLKD+IV+A CG DEVLP NADLPAD+FT CL TPMP+ALRWF+R+NK   +SM GVDPEWVDKIPG L +R +PLGEL W FTAIMDAIAW++L   LFQKLFR DLLVA
Sbjct:   82 TQYIPLSIHDLKDWAGKPSIFVLDCSAAGVLLPHFVEPTTPVPPQDEDGDQXXXXXXXXGASSGQQHPQQRLSSGGGGSVAPSPVSSCGGRAPPSVASSPAGSGGTFTGSGGRGRPLKDVIVMAACGEDEVLPTNADLPADVFTCCLTTPMPMALRWFIRQNKD--LSMSGVDPEWVDKIPGSLGNRLTPLGELEWIFTAIMDAIAWSTLPLPLFQKLFRGDLLVA 305
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BLAST of mRNA_H-elongata_contig79959.15645.1 vs. uniprot
Match: A0A7S4V807_9STRA (Hypothetical protein (Fragment) n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V807_9STRA)

HSP 1 Score: 213 bits (542), Expect = 6.370e-60
Identity = 123/232 (53.02%), Postives = 147/232 (63.36%), Query Frame = 1 
Query:    1 TQYIPLSVHELKSWAGTPTIFVVDCSAAGVLMEHFTQPLLQPEDDLDVLPVAGVTGTAATGTPSAHNNDSLAPNGGVAPSPKSSVGRVPSVASSPVGSGGTFAASGRPLKDIIVLAPCGADEVLPMNADLPADLFTSCLLTPMPIALRWFVRRNKVSWISMEGVDPEWVDKIPGKLTDRQSPLGELHWTFTAIMDAIAWNSLSSTLFQKLFRQDLLVASLFRNFLLADRIMR 696
            TQYIPLSV +LK W G P+I V+DCS AGVLM   TQPL             G T  +ATG P +                    G  P+ +   V       AS R ++D IVLAP   +E+LP+N   PAD+FTSCL TP+PIALRWFV +N    +SME +DPE VD IPGK+ DR++PLGEL+W FTAI D IAWN L S LFQ+LFRQDLLVAS+FRNFLLADRI+R
Sbjct:  302 TQYIPLSVSDLKKWIGKPSIVVLDCSGAGVLMPFLTQPL-------------GTTSASATGMPVSSXXXXXXXXX---------XGGAPTTSQFAVEEDEATKAS-RTVRDTIVLAPTSENELLPLNPAFPADIFTSCLTTPIPIALRWFVHQNP---LSMENLDPEAVDSIPGKINDRKTPLGELNWIFTAITDTIAWNVLPSPLFQRLFRQDLLVASMFRNFLLADRILR 507
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BLAST of mRNA_H-elongata_contig79959.15645.1 vs. uniprot
Match: A0A060WV05_ONCMY (Raptor_N domain-containing protein n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A060WV05_ONCMY)

HSP 1 Score: 195 bits (496), Expect = 4.710e-59
Identity = 111/232 (47.84%), Postives = 142/232 (61.21%), Query Frame = 1 
Query:    1 TQYIPLSVHELKSWAGTPTIFVVDCSAAGVLMEHFTQPLLQPEDDLDVLPVAGVTGTAATGTPSAHNNDSLAPNGGVAPSPKSSVGRVPSVASSPVGSGGTFAASGRPLKDIIVLAPCGADEVLPMNADLPADLFTSCLLTPMPIALRWFVRRNKVSWISMEGVDPEWVDKIPGKLTDRQSPLGELHWTFTAIMDAIAWNSLSSTLFQKLFRQDLLVASLFRNFLLADRIMR 696
            TQYIPLSV++L++W G+P+IFV DCS AG++++ F Q  LQ E +L+V  +                            +P   + ++P   S               +K+ I LA C A E+LPMN DLPADLFTSCL TP+ IALRWF  +     +   GV  + ++KIPG+L DR++PLGEL+W FTAI D IAWN L   LFQKLFRQDLLVASLFRNFLLA+RIMR
Sbjct:   35 TQYIPLSVYDLQTWMGSPSIFVYDCSNAGIIVKSFKQFALQREQELEVAAI----------------------------NPNHPLAQMPLPPS---------------MKNCIQLAACEASELLPMNPDLPADLFTSCLTTPIKIALRWFCMQKSAKLVP--GVTLDLIEKIPGRLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMR 221
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BLAST of mRNA_H-elongata_contig79959.15645.1 vs. uniprot
Match: A0A7S2RDT6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RDT6_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.610e-58
Identity = 115/235 (48.94%), Postives = 146/235 (62.13%), Query Frame = 1 
Query:    1 TQYIPLSVHELKS-WAGTPTIFVVDCSAAGVLMEHFTQPLLQPEDDLD--VLPVAGVTGTAATGTPSAHNNDSLAPNGGVAPSPKSSVGRVPSVASSPVGSGGTFAASGRPLKDIIVLAPCGADEVLPMNADLPADLFTSCLLTPMPIALRWFVRRNKVSWISMEGVDPEWVDKIPGKLTDRQSPLGELHWTFTAIMDAIAWNSLSSTLFQKLFRQDLLVASLFRNFLLADRIMR 696
            TQYIPLS+ EL+S   G P I+V+DCS+A +L+ HF  P+  P    D   +P  G+    A G            N G  P   ++    P+  + P  SG T  +   P    IVL PC A E+LPM    PADLFT+CL TP+PIALRWFV +N    +SM GVDP+    +PG+L+DR+SP+GEL+W FTAI D IAW+ L   LFQ+LFRQDLLVASLFRNFLLA+R+ R
Sbjct:   33 TQYIPLSLMELRSSMVGQPAIYVLDCSSAAILLPHFQVPINAPGPTADHGAVPGPGLAPDPAGG----------GANHGAVPQAAAAATGAPAAGTPPTPSGPTSGSF--PNHGDIVLFPCAAHEILPMEPTYPADLFTTCLTTPIPIALRWFVLQNP---LSMAGVDPDVAMNVPGRLSDRKSPIGELNWIFTAITDTIAWSMLPEHLFQRLFRQDLLVASLFRNFLLAERVFR 252
[Close]
BLAST of mRNA_H-elongata_contig79959.15645.1 vs. uniprot
Match: A0A060WRD1_ONCMY (Raptor_N domain-containing protein n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A060WRD1_ONCMY)

HSP 1 Score: 196 bits (497), Expect = 4.440e-58
Identity = 115/232 (49.57%), Postives = 146/232 (62.93%), Query Frame = 1 
Query:    1 TQYIPLSVHELKSWAGTPTIFVVDCSAAGVLMEHFTQPLLQPEDDLDVLPVAGVTGTAATGTPSAHNNDSLAPNGGVAPSPKSSVGRVPSVASSPVGSGGTFAASGRPLKDIIVLAPCGADEVLPMNADLPADLFTSCLLTPMPIALRWFVRRNKVSWISMEGVDPEWVDKIPGKLTDRQSPLGELHWTFTAIMDAIAWNSLSSTLFQKLFRQDLLVASLFRNFLLADRIMR 696
            TQYIPLSV++L++W G+P+IFV DCS AG++++ F Q  LQ E +L+V            G    H    +A     A +P   + ++P   S               +K+ I LA C A E+LPMN DLPADLFTSCL TP+ IALRWF  +     +   GV  + ++KIPG+L DR++PLGEL+W FTAI D IAWN L   LFQKLFRQDLLVASLFRNFLLA+RIMR
Sbjct:  105 TQYIPLSVYDLQTWMGSPSIFVYDCSNAGIIVKSFKQFALQREQELEV------------GGRDIHCIRKVA-----AINPNHPLAQMPLPPS---------------MKNCIQLAACEASELLPMNPDLPADLFTSCLTTPIKIALRWFCMQKSAKLVP--GVTLDLIEKIPGRLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMR 302
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BLAST of mRNA_H-elongata_contig79959.15645.1 vs. uniprot
Match: A0A7R9YRN2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YRN2_9CHLO)

HSP 1 Score: 206 bits (524), Expect = 9.510e-58
Identity = 113/231 (48.92%), Postives = 145/231 (62.77%), Query Frame = 1 
Query:    1 TQYIPLSVHELKSWAGTPTIFVVDCSAAGVLMEHFTQPLLQPEDDLDVLPVAGVTGTAATGTPSAHNNDSLAPNGGVAPSPKSSVGRVPSVASSPVGSGGTFAASGRPLKDIIVLAPCGADEVLPMNADLPADLFTSCLLTPMPIALRWFVRRNKVSWISMEGVDPEWVDKIPGKLTDRQSPLGELHWTFTAIMDAIAWNSLSSTLFQKLFRQDLLVASLFRNFLLADRIM 693
            TQYIPLS++EL+SW GTPTI+V+DCSAAG+++  F   + Q + ++ ++P AG  G                                        GSG    A   PLK++IVL  CGA EVLP NA+LPAD+FT+CL TP+ +ALRWF  R   S +  +G+  E +D+IPG+ T+R++PLGEL+W FTAI D IAWN L   LFQKLFR DLLVASLFRNFLLA+RIM
Sbjct:  228 TQYIPLSIYELQSWLGTPTIYVIDCSAAGLIVNAFRAYIDQRQQEMRMMPGAGANG----------------------------------------GSGAPPLAD--PLKEVIVLGACGAGEVLPQNAELPADVFTACLTTPIKVALRWFCSR---SLLRHDGITKELIDRIPGRQTERKTPLGELNWIFTAITDTIAWNMLPRALFQKLFRSDLLVASLFRNFLLAERIM 413
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BLAST of mRNA_H-elongata_contig79959.15645.1 vs. uniprot
Match: A0A3B3D7F1_ORYME (Regulatory associated protein of MTOR complex 1 n=1 Tax=Oryzias melastigma TaxID=30732 RepID=A0A3B3D7F1_ORYME)

HSP 1 Score: 195 bits (495), Expect = 2.270e-57
Identity = 110/232 (47.41%), Postives = 142/232 (61.21%), Query Frame = 1 
Query:    1 TQYIPLSVHELKSWAGTPTIFVVDCSAAGVLMEHFTQPLLQPEDDLDVLPVAGVTGTAATGTPSAHNNDSLAPNGGVAPSPKSSVGRVPSVASSPVGSGGTFAASGRPLKDIIVLAPCGADEVLPMNADLPADLFTSCLLTPMPIALRWFVRRNKVSWISMEGVDPEWVDKIPGKLTDRQSPLGELHWTFTAIMDAIAWNSLSSTLFQKLFRQDLLVASLFRNFLLADRIMR 696
            TQYIPLS+++L++W G+P+IFV DCS AG++++ F Q  LQ E +L+V  +                            +P   + ++P   S               +K+ I LA C A E+LPMN DLPADLFTSCL TP+ IALRWF  +     +   GV  + ++KIPG+L DR++PLGEL+W FTAI D IAWN L   LFQKLFRQDLLVASLFRNFLLA+RIMR
Sbjct:  149 TQYIPLSIYDLQTWMGSPSIFVYDCSNAGIIVKSFKQFALQREQELEVAAI----------------------------NPSHPLAQMPLPPS---------------MKNCIQLAACEASELLPMNPDLPADLFTSCLTTPITIALRWFCMQKSAKLVP--GVTLDLIEKIPGRLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMR 335
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BLAST of mRNA_H-elongata_contig79959.15645.1 vs. uniprot
Match: A0A8C1T1L3_CYPCA (Raptor_N domain-containing protein n=3 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1T1L3_CYPCA)

HSP 1 Score: 193 bits (490), Expect = 2.350e-57
Identity = 110/232 (47.41%), Postives = 142/232 (61.21%), Query Frame = 1 
Query:    1 TQYIPLSVHELKSWAGTPTIFVVDCSAAGVLMEHFTQPLLQPEDDLDVLPVAGVTGTAATGTPSAHNNDSLAPNGGVAPSPKSSVGRVPSVASSPVGSGGTFAASGRPLKDIIVLAPCGADEVLPMNADLPADLFTSCLLTPMPIALRWFVRRNKVSWISMEGVDPEWVDKIPGKLTDRQSPLGELHWTFTAIMDAIAWNSLSSTLFQKLFRQDLLVASLFRNFLLADRIMR 696
            TQYIPLS+++L++W G+P+IFV DCS AG++++ F Q  LQ E +L+V  +                            +P   + ++P   S               +K+ I LA C A E+LPMN DLPADLFTSCL TP+ IALRWF  +     +   GV  + ++KIPG+L DR++PLGEL+W FTAI D IAWN L   LFQKLFRQDLLVASLFRNFLLA+RIMR
Sbjct:   95 TQYIPLSIYDLQTWMGSPSIFVYDCSNAGIIVKSFKQFALQREQELEVAAI----------------------------NPNHPLVQMPLPPS---------------MKNCIQLAACEASELLPMNPDLPADLFTSCLTTPIKIALRWFCMQKGAKLVP--GVTLDLIEKIPGRLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMR 281
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BLAST of mRNA_H-elongata_contig79959.15645.1 vs. uniprot
Match: K3WJU9_GLOUD (Raptor_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJU9_GLOUD)

HSP 1 Score: 206 bits (523), Expect = 2.860e-57
Identity = 113/232 (48.71%), Postives = 144/232 (62.07%), Query Frame = 1 
Query:    1 TQYIPLSVHELKSWAGTPTIFVVDCSAAGVLMEHFTQPLLQPEDDLDVLPVAGVTGTAATGTPSAHNNDSLAPNGGVAPSPKSSVGRVPSVASSPVGSGGTFAASGRPLKDIIVLAPCGADEVLPMNADLPADLFTSCLLTPMPIALRWFVRRNKVSWISMEGVDPEWVDKIPGKLTDRQSPLGELHWTFTAIMDAIAWNSLSSTLFQKLFRQDLLVASLFRNFLLADRIMR 696
            TQYIPL V++L+SW GTP+I+V DCSAAG+L+ HF  P  QP  D +                                                 G GG  +++G    + IVLA C A+E+LPMN +L AD+FTSCL TP+ +ALRWF+ +N+   ISM  +DP ++++IPGKLTDR++PLGEL+W FTAI D IAWN L   LFQKLFRQDLLVASLFRNFLLA+RIM+
Sbjct:  201 TQYIPLLVYDLQSWVGTPSIYVFDCSAAGILLGHFNNPPAQPNADGN-------------------------------------------------GMGGMSSSAG----EAIVLAACAANEILPMNPELCADVFTSCLTTPITVALRWFISQNE---ISMSHLDPNFIERIPGKLTDRKTPLGELNWIFTAITDTIAWNILPKELFQKLFRQDLLVASLFRNFLLAERIMK 376
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79959.15645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBF0_9PHAE3.120e-8264.58Raptor_N domain-containing protein n=1 Tax=Ectocar... [more]
D7FIL6_ECTSI3.970e-7662.83Raptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
A0A7S4V807_9STRA6.370e-6053.02Hypothetical protein (Fragment) n=4 Tax=Ditylum br... [more]
A0A060WV05_ONCMY4.710e-5947.84Raptor_N domain-containing protein n=1 Tax=Oncorhy... [more]
A0A7S2RDT6_9STRA1.610e-5848.94Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A060WRD1_ONCMY4.440e-5849.57Raptor_N domain-containing protein n=1 Tax=Oncorhy... [more]
A0A7R9YRN2_9CHLO9.510e-5848.92Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
A0A3B3D7F1_ORYME2.270e-5747.41Regulatory associated protein of MTOR complex 1 n=... [more]
A0A8C1T1L3_CYPCA2.350e-5747.41Raptor_N domain-containing protein n=3 Tax=Cyprinu... [more]
K3WJU9_GLOUD2.860e-5748.71Raptor_N domain-containing protein n=1 Tax=Globisp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79959contigH-elongata_contig79959:453..2844 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score260.4
Seed ortholog evalue8.1e-67
Seed eggNOG ortholog2880.D7FIL6
Preferred nameRPTOR
KEGG koko:K07204
KEGG Pathwayko04136,ko04138,ko04140,ko04150,ko04151,ko04152,ko04211,ko04213,ko04714,ko04910,ko05206,map04136,map04138,map04140,map04150,map04151,map04152,map04211,map04213,map04714,map04910,map05206
GOsGO:0000003,GO:0000151,GO:0000182,GO:0000323,GO:0001016,GO:0001025,GO:0001030,GO:0001031,GO:0001032,GO:0001067,GO:0001101,GO:0001156,GO:0001558,GO:0001932,GO:0001933,GO:0001934,GO:0001936,GO:0001938,GO:0002165,GO:0002791,GO:0002792,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0004857,GO:0004860,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005764,GO:0005773,GO:0005776,GO:0005829,GO:0006139,GO:0006355,GO:0006359,GO:0006396,GO:0006469,GO:0006725,GO:0006807,GO:0006914,GO:0006950,GO:0007049,GO:0007050,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007346,GO:0007399,GO:0007517,GO:0007552,GO:0007562,GO:0007568,GO:0008047,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008284,GO:0008286,GO:0008340,GO:0008361,GO:0008582,GO:0009056,GO:0009267,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009791,GO:0009793,GO:0009886,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010073,GO:0010074,GO:0010154,GO:0010243,GO:0010259,GO:0010467,GO:0010468,GO:0010492,GO:0010494,GO:0010506,GO:0010556,GO:0010557,GO:0010562,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010608,GO:0010623,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010769,GO:0010770,GO:0010799,GO:0010800,GO:0010817,GO:0010975,GO:0010976,GO:0012501,GO:0014070,GO:0016043,GO:0016070,GO:0016241,GO:0016246,GO:0016441,GO:0016458,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019207,GO:0019209,GO:0019210,GO:0019219,GO:0019220,GO:0019222,GO:0019827,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030154,GO:0030234,GO:0030291,GO:0030295,GO:0030307,GO:0030422,GO:0030674,GO:0031047,GO:0031050,GO:0031053,GO:0031054,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031344,GO:0031346,GO:0031399,GO:0031400,GO:0031401,GO:0031461,GO:0031667,GO:0031668,GO:0031669,GO:0031929,GO:0031931,GO:0031974,GO:0031981,GO:0032006,GO:0032008,GO:0032101,GO:0032103,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032296,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032991,GO:0033135,GO:0033138,GO:0033554,GO:0033673,GO:0033674,GO:0034470,GO:0034641,GO:0034660,GO:0035069,GO:0035096,GO:0035194,GO:0035195,GO:0035196,GO:0035556,GO:0035770,GO:0036464,GO:0038201,GO:0038202,GO:0040008,GO:0040012,GO:0040017,GO:0040029,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042327,GO:0042594,GO:0043085,GO:0043086,GO:0043170,GO:0043200,GO:0043201,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043331,GO:0043434,GO:0043549,GO:0043565,GO:0044087,GO:0044092,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044248,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044877,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045786,GO:0045787,GO:0045793,GO:0045859,GO:0045860,GO:0045886,GO:0045893,GO:0045926,GO:0045927,GO:0045931,GO:0045935,GO:0045936,GO:0045937,GO:0045945,GO:0046483,GO:0046676,GO:0046883,GO:0046888,GO:0048316,GO:0048468,GO:0048477,GO:0048507,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048608,GO:0048609,GO:0048638,GO:0048640,GO:0048699,GO:0048707,GO:0048731,GO:0048856,GO:0048869,GO:0050678,GO:0050679,GO:0050708,GO:0050709,GO:0050767,GO:0050769,GO:0050770,GO:0050772,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050796,GO:0050803,GO:0050807,GO:0050896,GO:0050920,GO:0050921,GO:0051046,GO:0051048,GO:0051049,GO:0051051,GO:0051093,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051223,GO:0051224,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051270,GO:0051272,GO:0051338,GO:0051347,GO:0051348,GO:0051704,GO:0051716,GO:0051726,GO:0051960,GO:0051961,GO:0051962,GO:0051963,GO:0051964,GO:0060033,GO:0060090,GO:0060255,GO:0060284,GO:0061061,GO:0061458,GO:0061919,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070887,GO:0070918,GO:0071229,GO:0071230,GO:0071233,GO:0071310,GO:0071359,GO:0071375,GO:0071407,GO:0071417,GO:0071495,GO:0071496,GO:0071684,GO:0071704,GO:0071840,GO:0071889,GO:0071900,GO:0071901,GO:0071902,GO:0080008,GO:0080084,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090068,GO:0090087,GO:0090276,GO:0090278,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0098727,GO:0098772,GO:0120035,GO:0140098,GO:1900034,GO:1900087,GO:1901360,GO:1901363,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902494,GO:1902531,GO:1902533,GO:1902667,GO:1902669,GO:1902680,GO:1902806,GO:1902808,GO:1903506,GO:1903508,GO:1903530,GO:1903531,GO:1903664,GO:1903666,GO:1904396,GO:1904397,GO:1904950,GO:1905809,GO:1990234,GO:1990837,GO:1990904,GO:2000026,GO:2000045,GO:2000112,GO:2001141
EggNOG free text desc.TOR signaling
EggNOG OGsKOG1517@1,KOG1517@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRaptor
Ec32 orthologEc-27_000210.1
Exons3
Model size696
Cds size696
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79959.15645.1prot_H-elongata_contig79959.15645.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig79959 453..2844 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931204.5968266-CDS-H-elongata_contig79959:452..6741622931204.5968266-CDS-H-elongata_contig79959:452..674Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79959 453..674 -
1691679740.617199-CDS-H-elongata_contig79959:452..6741691679740.617199-CDS-H-elongata_contig79959:452..674Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79959 453..674 -
1622931204.6147535-CDS-H-elongata_contig79959:1817..20861622931204.6147535-CDS-H-elongata_contig79959:1817..2086Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79959 1818..2086 -
1691679740.6287146-CDS-H-elongata_contig79959:1817..20861691679740.6287146-CDS-H-elongata_contig79959:1817..2086Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79959 1818..2086 -
1622931204.6334083-CDS-H-elongata_contig79959:2639..28441622931204.6334083-CDS-H-elongata_contig79959:2639..2844Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79959 2640..2844 -
1691679740.6372995-CDS-H-elongata_contig79959:2639..28441691679740.6372995-CDS-H-elongata_contig79959:2639..2844Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79959 2640..2844 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig79959.15645.1

>prot_H-elongata_contig79959.15645.1 ID=prot_H-elongata_contig79959.15645.1|Name=mRNA_H-elongata_contig79959.15645.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=232bp
TQYIPLSVHELKSWAGTPTIFVVDCSAAGVLMEHFTQPLLQPEDDLDVLP
VAGVTGTAATGTPSAHNNDSLAPNGGVAPSPKSSVGRVPSVASSPVGSGG
TFAASGRPLKDIIVLAPCGADEVLPMNADLPADLFTSCLLTPMPIALRWF
VRRNKVSWISMEGVDPEWVDKIPGKLTDRQSPLGELHWTFTAIMDAIAWN
SLSSTLFQKLFRQDLLVASLFRNFLLADRIMR
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mRNA from alignment at H-elongata_contig79959:453..2844-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig79959.15645.1 ID=mRNA_H-elongata_contig79959.15645.1|Name=mRNA_H-elongata_contig79959.15645.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2392bp|location=Sequence derived from alignment at H-elongata_contig79959:453..2844- (Himanthalia elongata Himel1 dioecious)
ACCCAGTACATCCCACTTTCGGTGCACGAGCTCAAATCATGGGCCGGAAC
TCCCACCATTTTCGTGGTTGATTGTTCTGCGGCCGGCGTACTTATGGAGC
ACTTCACTCAGCCCTTGCTGCAGCCCGAGGATGACCTCGATGTGCTCCCT
GTCGCCGGTGTGACAGGAACTGCAGCGACGGGTACCCCCTCTGCACACAA
TAATGGTGGGTACTAATAGTAAGATATATAGAGGTACAGTATATATACAC
TATAGAGGTACAATATATATACAAGAAATAAAGACAACGTTGCTCACCGA
ACCGAATCTGGTGCCTAAGTATTCAAGGTCGGACATTGTCACGTTGTGAT
CAACACTATTAGGAGGCTTTTTGAACGCAGCGATGCTCTAAAGCCTGGGT
TTTCTGGTGATAAGAAGGCGTGGATTGATCGCTTGCTATCCCGGCATGTC
GTTACTCGCCCGCAATGGGTGGGCGGAGAGTTAAATAAGAAGTCGCAGCT
TTTGGGGGCTGTGATGTGGTGTCCCACGGCAACTCTTTTTTTGTTTTTGT
TTTTCTGTAGAACATAACTTTTCTCTCAAAAGGCTCCGTGCTCCGATGCC
GACCGTAATGCTCTGCGCTATTTTTTTCGTTTTTTACATTCCTATTTTTC
TCTCTCTGTCCCCCGTTTGCCTTCAAGGTGAAGCATCCTTCACGGCCTAC
AATCATAGGACGGCGCACCCTTTCTGTAACGGTGGACCCCAGTTCCCCGC
TTACCCAGATTCTCTCGCGCCCAACGGCGGTGTTGCCCCGTCTCCCAAGA
GCAGCGTGGGCCGAGTCCCGTCCGTTGCATCGTCTCCCGTGGGAAGTGGG
GGGACCTTCGCAGCATCGGGGCGACCGCTCAAGGACATCATCGTCCTGGC
CCCCTGTGGCGCGGACGAGGTGCTGCCGATGAACGCGGACCTCCCCGCCG
ACCTATTTACTTCGTGTCTATTGACCCCGATGCCCATCGCGCTGCGGTGG
TTCGTGAGAAGGAACAAAGTGAGTTGGGTGCGTCCCACGCTCTTGAGCGG
TTAGATAGGTTAGATAGGTTAGATAGGGAACCGCTTGGTAATGGTAACAA
AGGTTAAAAAAAGGTATCCAGTAGATCACGTATCTCAAGAATACGGGTAC
GGGGCGATGCATAAAACACATGACGTCAGTCTATAATATGTAAATGAAGA
CATGTATATGTATATATATATATTCCTCTTAGTAGTGTTGCTGAACAATA
CGGTACAGCTTTCGAACAATCCTACGGCCAGCAGATATATTATGTATAGT
ATATGAAGGATGAGTGATGATTGATGAGTGATGAGTGTTACCCCTTGGGA
AAGAGAAAGAGACAAGACTCTTCGACCTAGGTCCGTCTCTGAGCTATTAA
TAGCAGCAGCACACATCTGTCGAATTTTATTATATTATCTCTTATCTTAT
CTTATCTTATTTTTATCTTATCTCATCTTATATTATCTCATCTTATCCTA
TCTTATCAATTATCTTTTTTTATATATTTTCCCTTTTTAGCTTAACAAAT
GGGGTTTTGGGGGGTTGGGTGGAAGAGGGGGGAGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGAGGGGTGAGGTATAAATCGTTACCACGTAAAGCCATT
AAGAGTCATTCTAAATAGCATAGAGAAGTACGAAGCTCACTCATTGCTGT
CAGTGGTGCCAAACCCGCATAGCAGTTATTTTTGTAAGCAGGGAGCAGGG
AGGGATATGTTAGATTTCTGAGTACCACGGGAAGGATAGGTACCGTTGCG
GGCAGCGATAATGAGGGAACATGTGCCTGTTGATAGCACGTTGGTTTGGC
TGGCCCCAATCGATCGATATAATACAAGGATGTTATGAAGGGGCTACCTC
CCAGCCGAATCGAAATCGTTTATTATACTACATGTCATACCTCGTACAGT
ACGTGTCATCACACATCCCGAAGCCCCTTATGACTTATCTCCTGGTGTAG
CGGGTTGAGCCGATTCTGACTGCCCCCACCTCAGCGATGGCTTCATCGCT
CGTCATTTTTGTGATTGACCCGTTGCCGCTGATACCAAATGCCCTTGGGC
CCCGCCGACTTCGCCTTTTGTGGGATTGTGTTGCCTTGCATCGCCTTGCA
TCGCCTCGTCGCGTGCGCAGATTTCGATGGAGGGAGTCGATCCAGAGTGG
GTGGACAAAATTCCAGGTAAGCTGACCGATAGGCAGAGCCCCCTGGGGGA
GCTCCACTGGACCTTCACGGCGATCATGGACGCCATCGCGTGGAACTCCC
TATCTTCGACGTTGTTCCAGAAGCTGTTCCGGCAGGACCTGCTGGTGGCG
AGCCTCTTTCGAAACTTCTTGCTAGCGGATCGAATTATGAGG
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Coding sequence (CDS) from alignment at H-elongata_contig79959:453..2844-

>mRNA_H-elongata_contig79959.15645.1 ID=mRNA_H-elongata_contig79959.15645.1|Name=mRNA_H-elongata_contig79959.15645.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1392bp|location=Sequence derived from alignment at H-elongata_contig79959:453..2844- (Himanthalia elongata Himel1 dioecious)
ACCCAGTACATCCCACTTTCGGTGCACGAGCTCAAATCATGGGCCGGAAC
TCCCACCATTTTCGTGGTTGATTGTTCTGCGGCCGGCGTACTTATGGAGC
ACTTCACTCAGCCCTTGCTGCAGCCCGAGGATGACCTCGATGTGCTCCCT
GTCGCCGGTGTGACAGGAACTGCAGCGACGGGTACCCCCTCTGCACACAA
TAATGACCCAGTACATCCCACTTTCGGTGCACGAGCTCAAATCATGGGCC
GGAACTCCCACCATTTTCGTGGTTGATTGTTCTGCGGCCGGCGTACTTAT
GGAGCACTTCACTCAGCCCTTGCTGCAGCCCGAGGATGACCTCGATGTGC
TCCCTGTCGCCGGTGTGACAGGAACTGCAGCGACGGGTACCCCCTCTGCA
CACAATAATGATTCTCTCGCGCCCAACGGCGGTGTTGCCCCGTCTCCCAA
GAGCAGCGTGGGCCGAGTCCCGTCCGTTGCATCGTCTCCCGTGGGAAGTG
GGGGGACCTTCGCAGCATCGGGGCGACCGCTCAAGGACATCATCGTCCTG
GCCCCCTGTGGCGCGGACGAGGTGCTGCCGATGAACGCGGACCTCCCCGC
CGACCTATTTACTTCGTGTCTATTGACCCCGATGCCCATCGCGCTGCGGT
GGTTCGTGAGAAGGAACAAAGTGAGTTGGATTCTCTCGCGCCCAACGGCG
GTGTTGCCCCGTCTCCCAAGAGCAGCGTGGGCCGAGTCCCGTCCGTTGCA
TCGTCTCCCGTGGGAAGTGGGGGGACCTTCGCAGCATCGGGGCGACCGCT
CAAGGACATCATCGTCCTGGCCCCCTGTGGCGCGGACGAGGTGCTGCCGA
TGAACGCGGACCTCCCCGCCGACCTATTTACTTCGTGTCTATTGACCCCG
ATGCCCATCGCGCTGCGGTGGTTCGTGAGAAGGAACAAAGTGAGTTGGAT
TTCGATGGAGGGAGTCGATCCAGAGTGGGTGGACAAAATTCCAGGTAAGC
TGACCGATAGGCAGAGCCCCCTGGGGGAGCTCCACTGGACCTTCACGGCG
ATCATGGACGCCATCGCGTGGAACTCCCTATCTTCGACGTTGTTCCAGAA
GCTGTTCCGGCAGGACCTGCTGGTGGCGAGCCTCTTTCGAAACTTCTTGC
TAGCGGATCGAATTATGAGGATTTCGATGGAGGGAGTCGATCCAGAGTGG
GTGGACAAAATTCCAGGTAAGCTGACCGATAGGCAGAGCCCCCTGGGGGA
GCTCCACTGGACCTTCACGGCGATCATGGACGCCATCGCGTGGAACTCCC
TATCTTCGACGTTGTTCCAGAAGCTGTTCCGGCAGGACCTGCTGGTGGCG
AGCCTCTTTCGAAACTTCTTGCTAGCGGATCGAATTATGAGG
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