mRNA_H-elongata_contig79770.15631.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig79770.15631.1
Unique NamemRNA_H-elongata_contig79770.15631.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 9.370e-76
Identity = 136/285 (47.72%), Postives = 189/285 (66.32%), Query Frame = 1
Query:    7 IHFKEFVRQVSKV-KDPKLPTRRQLVDDFEETRDDLYQGARKMLERQHTAMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNITA-HIGCCNHRIECTTALVFNEPGVKRTMALQPALVTRYTKSSKMTDRLEEICWILKVPSLQVMQNVETRWNSTFSSVERTRQLRDAIQLHERLDNIAPLLTDYDWEVLKLIEPILRPFMEIQVELEGAKYVTGSLVVPYVHDVSRGL 855
            + + EF   VS + K  + P RR LV+   E + +L      ML+ ++ A+T+DGWTS SN++Y S T ++ID  + LH L+++C K +  T G DLA  +  +I+ HG+ GRVTA VTDC+PSM+  GR LE       HIGC NHR+E TT+ VFN   +   +A   A+V RY +SS+M+ RL     ILK+  L V+Q+VETRW S+++ +ER   L  AI+LHE  DNIAP+L++ DWEVL+LIEPILRPFM+ Q +LEGAKYVTGS+ VP + ++  GL
Sbjct:   29 VEYPEFHAVVSGLNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLGA-LAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGL 312          
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 3.170e-74
Identity = 131/268 (48.88%), Postives = 180/268 (67.16%), Query Frame = 1
Query:   55 KLPTRRQLVDDFEETRDDLYQGARKMLERQHTAMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNIT-AHIGCCNHRIECTTALVFNEPGVKRTMALQPALVTRYTKSSKMTDRLEEICWILKVPSLQVMQNVETRWNSTFSSVERTRQLRDAIQLHERLDNIAPLLTDYDWEVLKLIEPILRPFMEIQVELEGAKYVTGSLVVPYVHDVSRGL 855
            K+P+RR+L+      +  L      ML+ +  A+T+DGWTS +N++Y S T ++ID E+ LH L++DC K +  T G DLA  V G+++ H + GRV A VTDC+PSMI  GR LE    T +HIGC NHR+E TT+ VFN   +   + L   LV RY KSS+M  RL ++C IL++  L VMQ+VETRW ST++ V R   L  AI+LHE +D + PLL+D DWEVL+LIEPILRPFM+ Q +LEGA+YVTGS+ +  + ++  GL
Sbjct:   10 KVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLGA-LGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGL 276          
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 1.510e-66
Identity = 119/278 (42.81%), Postives = 172/278 (61.87%), Query Frame = 1
Query:   10 HFKEFVRQVSKVKDPKLPTRRQLVDDFEETRDDLYQGARKMLERQHTAMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNITAHIGCCNHRIECTTALVFNEPGVKRTMALQPALVTRYTKSSKMTDRLEEICWILKVPSLQVMQNVETRWNSTFSSVERTRQLRDAIQLHERLDNIAPLLTDYDWEVLKLIEPILRPFMEIQVELEGAKYVTGSLVVPYVHDV 843
            HF E VR +       +P +R  ++     +  L Q     L  +H A+TSDGWTS SNDTY  +T ++I   F+L  L ++C+K   +T G DL + VK +I  +G+  R  A  TDC+PSM+  GR LEE     H+GC  HR+E  T+  F  PGV + +AL   +VTRY  SS+ +DRLE++  I++V   +V+Q+VETRW ST++S+ R   LR  I  HER+D+I PLL + DWEVL+++EP+ +PF+  Q   E +K VT SLV+PY+ D+
Sbjct:    6 HFIEMVRFLKSR--ATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADL 281          
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 5.130e-65
Identity = 114/238 (47.90%), Postives = 156/238 (65.55%), Query Frame = 1
Query:  142 QHTAMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNITAHIGCCNHRIECTTALVFNEPGVKRTMALQPALVTRYTKSSKMTDRLEEICWILKVPSLQVMQNVETRWNSTFSSVERTRQLRDAIQLHERLDNIAPLLTDYDWEVLKLIEPILRPFMEIQVELEGAKYVTGSLVVPYVHDVSRGL 855
            +H A+TSDGWT  SNDTY S+T ++I   F+L  L ++C+K   +TAG DL + VK +I  +G+ GR  A  TDC+ SM+  GR LEE     H+GC  HR+E  T+  F  PGV + +AL   +VTRYT SS+ +DRLE++C I++V    V+Q+VETRW ST+ S+ R   LR  I  HE +D+  PLL + DWEVL+L+E +L+PFM  Q  LE +K VT  LV PY+ D+  GL
Sbjct:    4 EHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGL 241          
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 1.350e-52
Identity = 96/223 (43.05%), Postives = 136/223 (60.99%), Query Frame = 1
Query:  175 SCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNITAHIGCCNHRIECTTALVFNEPGVKRTMALQPALVTRYTKSSKMTDRLEEICWILKVPSLQVMQNVETRWNSTFSSVERTRQLRDAIQLHERLDNIAPLLTDYDWEVLKLIEPILRPFMEIQVELEGAKYVTGSLVVPYVHDV 843
            S SNDTY ++T ++I   F+L  L ++ +K   +T G DL + VK +I  +G+ GR  A  TDC+P M+  GR LEE    +H+GC  HR E  T+  F  PGV + +AL   +VTRYT SS+ ++RLE++C I++V   +V+Q+VETRW ST                   +D+I PLL + DWEVL+L+EP+L PFM  Q  LE +K VT SLV  Y+ D+
Sbjct:    3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADL 209          
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 2.450e-35
Identity = 75/190 (39.47%), Postives = 115/190 (60.53%), Query Frame = 1
Query:   55 KLPTRRQLVDDFEETRDDLYQGARKMLERQHTAMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLE-ERNITAHIGCCNHRIECTTALVFNEPGVKRTMALQPALVTRYTKSSKMTDRLEE-ICWILKVPSLQVMQNVET 618
            ++P ++  V      +  + +   +++E +   +TSDGWTSC+NDTY S T + I   + L  L++DC K    T G  LA  +K  +  HG+ G+VTA  TDC+PSM+  GR L  +  ++  IGCCN+R+E T+++VFN P VK+ M L   LVTRY  SS+  DRL++ +   L V + +V+Q+V T
Sbjct:   10 RVPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVT 199          
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: UPI000CE20A6F (zinc finger BED domain-containing protein 4-like n=1 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE20A6F)

HSP 1 Score: 108 bits (269), Expect = 1.250e-23
Identity = 77/243 (31.69%), Postives = 117/243 (48.15%), Query Frame = 1
Query:  151 AMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNITAHIGCCNHRIECTTALVFNEPGVKRTMALQPAL----------VTRYTKSSKMTDRLEEICWILKVPSLQVMQNVETRWNSTFSSVERTRQLRDAI-----QLHERLDNIAPLLTDYDWEVLKLIEPILRPFMEIQVELEGAKYVTGSLVVPYV 834
            ++T+D WTS + D Y + T+ FI +E  L  + +   K  +      LA+    L++  G+ G+VT  VTDC P+M+ C   L    +  HI C  H +            VK+++A  P L          V  +  S+   ++L E+   L  P  ++MQ VETRWNSTF+ +ER  + R+ +      LH  L    P LT  D++ +     +L PF E  VEL   K V+ S V+P V
Sbjct:  101 SLTADMWTSINMDAYLAVTSHFITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANIL----LLRHIMCFAHMLNLV---------VKKSLAQTPELEDVRSKGRRIVGLFKSSTTAKEKLSEMERQLARPEHKLMQEVETRWNSTFNMLERLFKEREPLGAALATLHTDL----PPLTSEDYQAIHHCLSVLSPFQEATVELSTEKRVSASKVIPMV 326          
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: UPI0007425A22 (zinc finger BED domain-containing protein 1-like n=1 Tax=Cyprinodon variegatus TaxID=28743 RepID=UPI0007425A22)

HSP 1 Score: 107 bits (266), Expect = 2.920e-23
Identity = 82/288 (28.47%), Postives = 147/288 (51.04%), Query Frame = 1
Query:    7 IHFKEFVRQVSKVKDPK--LPTRRQLVDDFEETRDDLYQGAR-KMLERQHTAMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNITAHIGCCNHRIECTTALVFNEPGVKRTMALQPALVTRYTKSSK-MTDRLEEICWILKVPSLQVMQNVETRWNSTFSSVERTRQLRDAIQLH-ERLDNIAPLLTDYDWEVLKLIEPILRPFMEIQVELEGAKYVTGSLVVPYVHDVSRGL 855
            + FK FV ++    DP   LPTR+ L    EE  +   Q A+ K+ E    ++T+D WT  + D Y +    F+DD+  L+ + +  Q   +     ++A   K +++  G++ +VT  VTD  P+M+ C R+L+ R+   HI C  H +        ++  V   +  +   +  Y +SS  + ++L ++   L +  L++MQ VETRWNST+  ++R  +LR+ +      L    P+LT  ++E+++    +L PF    VEL   + V+ S V+P +  + + L
Sbjct:   49 VGFKAFVAKL----DPNYVLPTRQALKAMVEEKFESAKQKAKAKVGEVAAVSLTTDMWTFMNMDAYLAVMCHFLDDKARLNTVLLGVQSFPQSHTAENIACVKKSMMEEWGISNKVTCVVTDGAPNMVACVRELKLRH---HI-CVAHTMNLVVKKSLDQHPVLSGIQAKAWKLVGYCRSSTTVKEKLSQVQRHLGLQELKLMQEVETRWNSTYLMLQRLMELREPVGAALAGLQTDIPILTSEEFEIVRGCLSLLIPFYHATVELSAEETVSASKVIPLLKVLEQSL 328          
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: UPI000CE1F3DA (zinc finger BED domain-containing protein 4-like n=10 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE1F3DA)

HSP 1 Score: 108 bits (271), Expect = 4.200e-23
Identity = 78/243 (32.10%), Postives = 117/243 (48.15%), Query Frame = 1
Query:  151 AMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNITAHIGCCNHRIECTTALVFNEPGVKRTMALQPAL----------VTRYTKSSKMTDRLEEICWILKVPSLQVMQNVETRWNSTFSSVERTRQLRDAI-----QLHERLDNIAPLLTDYDWEVLKLIEPILRPFMEIQVELEGAKYVTGSLVVPYV 834
            ++T+D WTS + DTY + T  FI +E  L  + +   K  +      LA+    L++  G+ G+VT  VTDC P+M+ C   L    +  HI C  H +            VK+++A  P L          V  +  S+   ++L E+   L  P  +++Q VETRWNSTF+ +ER  + R+ +      LH  L    P LT  D++ +     IL PF E  VEL   K V+ S V+P V
Sbjct:  140 SLTADMWTSINMDTYLAVTCHFITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANIL----LLRHIMCFAHMLNLV---------VKKSLAQTPELEDIRSKGRRIVGLFKSSTTAKEKLSEMQRQLARPEHKLIQEVETRWNSTFNMLERLFKEREPLGAALATLHTDL----PPLTSEDYQAIHHCLSILSPFQEATVELSTEKRVSASKVIPMV 365          
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: UPI000CE1E21C (zinc finger BED domain-containing protein 4-like n=8 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE1E21C)

HSP 1 Score: 107 bits (266), Expect = 1.080e-22
Identity = 77/243 (31.69%), Postives = 116/243 (47.74%), Query Frame = 1
Query:  151 AMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNITAHIGCCNHRIECTTALVFNEPGVKRTMALQPAL----------VTRYTKSSKMTDRLEEICWILKVPSLQVMQNVETRWNSTFSSVERTRQLRDAI-----QLHERLDNIAPLLTDYDWEVLKLIEPILRPFMEIQVELEGAKYVTGSLVVPYV 834
            ++T+D WTS + D Y + T  FI +E  L  + +   K  +      LA+    L++  G+ G+VT  VTDC P+M+ C   L    +  HI C  H +            VK+++A  P L          V  +  S+   ++L E+   L  P  +++Q VETRWNSTF+ +ER  + R+ +      LH  L    P LT  D++ +     IL PF E  VEL   K V+ S V+P V
Sbjct:   24 SLTADMWTSINMDAYLAVTCHFITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANIL----LLRHIMCFAHMLNLV---------VKKSLAQTPELEDIRSKGRRIVGLFKSSTTAKEKLSEMQRQLARPEHKLIQEVETRWNSTFNMLERLFKEREPLGAALATLHTDL----PPLTSEDYQAIHHCLSILSPFQEATVELSTEKRVSASKVIPMV 249          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUY5_9PHAE9.370e-7647.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCS5_ECTSI3.170e-7448.88Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5JJV8_9PHAE1.510e-6642.81Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JHP9_9PHAE5.130e-6547.90Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5KVI1_9PHAE1.350e-5243.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7Y8_9PHAE2.450e-3539.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000CE20A6F1.250e-2331.69zinc finger BED domain-containing protein 4-like n... [more]
UPI0007425A222.920e-2328.47zinc finger BED domain-containing protein 1-like n... [more]
UPI000CE1F3DA4.200e-2332.10zinc finger BED domain-containing protein 4-like n... [more]
UPI000CE1E21C1.080e-2231.69zinc finger BED domain-containing protein 4-like n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79770contigH-elongata_contig79770:1476..2330 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score250.4
Seed ortholog evalue1e-63
Seed eggNOG ortholog2880.D8LCS5
EggNOG free text desc.protein dimerization activity
EggNOG OGsKOG1121@1,KOG1121@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size855
Cds size855
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931202.7503178-CDS-H-elongata_contig79770:1475..23301622931202.7503178-CDS-H-elongata_contig79770:1475..2330Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79770 1476..2330 +
1691679739.8326297-CDS-H-elongata_contig79770:1475..23301691679739.8326297-CDS-H-elongata_contig79770:1475..2330Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79770 1476..2330 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79770.15631.1prot_H-elongata_contig79770.15631.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig79770 1476..2330 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig79770.15631.1

>prot_H-elongata_contig79770.15631.1 ID=prot_H-elongata_contig79770.15631.1|Name=mRNA_H-elongata_contig79770.15631.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=285bp
MRIHFKEFVRQVSKVKDPKLPTRRQLVDDFEETRDDLYQGARKMLERQHT
AMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLAD
NVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNITAHIGCCNHRIE
CTTALVFNEPGVKRTMALQPALVTRYTKSSKMTDRLEEICWILKVPSLQV
MQNVETRWNSTFSSVERTRQLRDAIQLHERLDNIAPLLTDYDWEVLKLIE
PILRPFMEIQVELEGAKYVTGSLVVPYVHDVSRGL
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mRNA from alignment at H-elongata_contig79770:1476..2330+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig79770.15631.1 ID=mRNA_H-elongata_contig79770.15631.1|Name=mRNA_H-elongata_contig79770.15631.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=855bp|location=Sequence derived from alignment at H-elongata_contig79770:1476..2330+ (Himanthalia elongata Himel1 dioecious)
ATGCGAATACACTTCAAAGAGTTCGTCCGGCAAGTCAGCAAAGTGAAAGA TCCTAAGCTACCCACCCGGCGCCAGCTGGTCGATGACTTTGAGGAAACAC GCGATGATTTGTATCAAGGCGCCAGAAAGATGTTGGAACGCCAACATACC GCGATGACTTCAGATGGGTGGACGTCATGTTCCAACGACACCTACCACTC CTACACCGCCTCCTTCATTGATGACGAGTTCAACTTGCACGAGCTTGCAA TGGACTGCCAGAAGATGAGCGAGAAAACTGCAGGAACAGATCTTGCGGAC AACGTCAAAGGTCTGATAGATTCCCATGGTATGGCCGGGCGCGTCACTGC TGATGTAACTGACTGCGACCCGTCAATGATTGTGTGCGGCCGGAAGCTTG AAGAAAGGAACATCACGGCTCACATTGGCTGCTGCAACCACCGAATCGAG TGCACCACTGCGCTGGTCTTCAACGAACCGGGGGTGAAGAGGACGATGGC ACTCCAACCGGCACTCGTTACCCGGTACACTAAATCAAGTAAAATGACTG ACCGCCTCGAAGAGATATGCTGGATACTCAAGGTGCCTTCGCTGCAGGTG ATGCAGAATGTGGAGACCAGGTGGAACTCAACGTTTAGTTCGGTTGAGCG TACAAGGCAACTGCGCGACGCAATCCAACTGCACGAGCGCCTTGACAATA TAGCACCACTGCTGACAGATTACGACTGGGAGGTGCTGAAGTTGATCGAG CCTATTCTTCGGCCTTTCATGGAGATACAGGTGGAGTTGGAGGGCGCAAA GTACGTCACAGGAAGCTTGGTGGTCCCCTACGTCCATGACGTCAGCCGCG GGCTG
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Coding sequence (CDS) from alignment at H-elongata_contig79770:1476..2330+

>mRNA_H-elongata_contig79770.15631.1 ID=mRNA_H-elongata_contig79770.15631.1|Name=mRNA_H-elongata_contig79770.15631.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1710bp|location=Sequence derived from alignment at H-elongata_contig79770:1476..2330+ (Himanthalia elongata Himel1 dioecious)
ATGCGAATACACTTCAAAGAGTTCGTCCGGCAAGTCAGCAAAGTGAAAGA
TCCTAAGCTACCCACCCGGCGCCAGCTGGTCGATGACTTTGAGGAAACAC
GCGATGATTTGTATCAAGGCGCCAGAAAGATGTTGGAACGCCAACATACC
GCGATGACTTCAGATGGGTGGACGTCATGTTCCAACGACACCTACCACTC
CTACACCGCCTCCTTCATTGATGACGAGTTCAACTTGCACGAGCTTGCAA
TGGACTGCCAGAAGATGAGCGAGAAAACTGCAGGAACAGATCTTGCGGAC
AACGTCAAAGGTCTGATAGATTCCCATGGTATGGCCGGGCGCGTCACTGC
TGATGTAACTGACTGCGACCCGTCAATGATTGTGTGCGGCCGGAAGCTTG
AAGAAAGGAACATCACGGCTCACATTGGCTGCTGCAACCACCGAATCGAG
TGCACCACTGCGCTGGTCTTCAACGAACCGGGGGTGAAGAGGACGATGGC
ACTCCAACCGGCACTCGTTACCCGGTACACTAAATCAAGTAAAATGACTG
ACCGCCTCGAAGAGATATGCTGGATACTCAAGGTGCCTTCGCTGCAGGTG
ATGCAGAATGTGGAGACCAGGTGGAACTCAACGTTTAGTTCGGTTGAGCG
TACAAGGCAACTGCGCGACGCAATCCAACTGCACGAGCGCCTTGACAATA
TAGCACCACTGCTGACAGATTACGACTGGGAGGTGCTGAAGTTGATCGAG
CCTATTCTTCGGCCTTTCATGGAGATACAGGTGGAGTTGGAGGGCGCAAA
GTACGTCACAGGAAGCTTGGTGGTCCCCTACGTCCATGACGTCAGCCGCG
GGCTGATGCGAATACACTTCAAAGAGTTCGTCCGGCAAGTCAGCAAAGTG
AAAGATCCTAAGCTACCCACCCGGCGCCAGCTGGTCGATGACTTTGAGGA
AACACGCGATGATTTGTATCAAGGCGCCAGAAAGATGTTGGAACGCCAAC
ATACCGCGATGACTTCAGATGGGTGGACGTCATGTTCCAACGACACCTAC
CACTCCTACACCGCCTCCTTCATTGATGACGAGTTCAACTTGCACGAGCT
TGCAATGGACTGCCAGAAGATGAGCGAGAAAACTGCAGGAACAGATCTTG
CGGACAACGTCAAAGGTCTGATAGATTCCCATGGTATGGCCGGGCGCGTC
ACTGCTGATGTAACTGACTGCGACCCGTCAATGATTGTGTGCGGCCGGAA
GCTTGAAGAAAGGAACATCACGGCTCACATTGGCTGCTGCAACCACCGAA
TCGAGTGCACCACTGCGCTGGTCTTCAACGAACCGGGGGTGAAGAGGACG
ATGGCACTCCAACCGGCACTCGTTACCCGGTACACTAAATCAAGTAAAAT
GACTGACCGCCTCGAAGAGATATGCTGGATACTCAAGGTGCCTTCGCTGC
AGGTGATGCAGAATGTGGAGACCAGGTGGAACTCAACGTTTAGTTCGGTT
GAGCGTACAAGGCAACTGCGCGACGCAATCCAACTGCACGAGCGCCTTGA
CAATATAGCACCACTGCTGACAGATTACGACTGGGAGGTGCTGAAGTTGA
TCGAGCCTATTCTTCGGCCTTTCATGGAGATACAGGTGGAGTTGGAGGGC
GCAAAGTACGTCACAGGAAGCTTGGTGGTCCCCTACGTCCATGACGTCAG
CCGCGGGCTG
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