prot_H-elongata_contig79761.15628.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig79761.15628.1
Unique Nameprot_H-elongata_contig79761.15628.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length64
Homology
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BLAST of mRNA_H-elongata_contig79761.15628.1 vs. uniprot
Match: D8LIM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIM4_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 4.220e-34
Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = 0 
Query:    1 MRQDILSGRLKRGYNPVYYNDSVAVGTIASERNTIDTCIFWMEQEKLRQEGKPHVYVDENGEV 63
            MR  +LSGRLKRGYNPVY+NDSVAVGT+ASERNTIDTCIFWMEQEKLRQ+GKPHVYVD  GEV
Sbjct:   52 MRHKVLSGRLKRGYNPVYWNDSVAVGTVASERNTIDTCIFWMEQEKLRQQGKPHVYVDAQGEV 114
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79761.15628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIM4_ECTSI4.220e-3487.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79761contigH-elongata_contig79761:29..220 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79761.15628.1mRNA_H-elongata_contig79761.15628.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig79761 23..220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig79761.15628.1 ID=prot_H-elongata_contig79761.15628.1|Name=mRNA_H-elongata_contig79761.15628.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp
MRQDILSGRLKRGYNPVYYNDSVAVGTIASERNTIDTCIFWMEQEKLRQE
GKPHVYVDENGEV*
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