prot_H-elongata_contig79671.15621.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig79671.15621.1
Unique Nameprot_H-elongata_contig79671.15621.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length177
Homology
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: D8LEA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA4_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 3.780e-93
Identity = 145/178 (81.46%), Postives = 160/178 (89.89%), Query Frame = 0
Query:    1 MLFFAGVLVVSSLNLLIGG-EEDHADSSHLENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRKR 177
            ML FAG+LVVSS  LL+ G EEDHADSS LE N+VL++ANW+ DS DYYDGEKFFTLVDG KKATPLLLCLICIE+TDFVFAVDSIPAVL IS DTFIVYASNVFAICAMRSIYTLVSHAISD+PYLKPAVALVLGFVG KM AEFFHY++ VG SL VV G+LA+GAIASV+SN++R
Sbjct:   46 MLVFAGILVVSSFKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLTVVCGLLAIGAIASVISNKRR 223          
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: A0A6H5JWN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWN8_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 9.290e-91
Identity = 145/178 (81.46%), Postives = 160/178 (89.89%), Query Frame = 0
Query:    1 MLFFAGVLVVSSLNLLIGG-EEDHADSSHLENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRKR 177
            ML FAG+LVVSSL LL+ G EEDHADSS LE N+VL++ANW+ DS DYYDGEKFFTLVDG KKATPLLLCLICIE+TDFVFAVDSIPAVL IS DTFIVYASNVFAICAMRSIYTLVSHAISD+PYLKPAVALVLGFVG KM AEFFHY++ VG SL VV G+LA+G IASV+SN++R
Sbjct:  233 MLVFAGILVVSSLKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLSVVCGLLAIGVIASVISNKRR 410          
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: A0A835ZA94_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA94_9STRA)

HSP 1 Score: 225 bits (573), Expect = 3.560e-71
Identity = 115/177 (64.97%), Postives = 144/177 (81.36%), Query Frame = 0
Query:    1 MLFFAGVLVVSSLNLLIGGEEDHADSSHLENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRKR 177
            +L FA +L+ SS+ LL   E++  D   L NNIVL+I+ +   S D Y+GEKFFT+VDG K ATPLLLCL+CIEL+DFVFAVDSIPAVLG+S DTFIVY+SNVFAI A+RS+YTLVSHAI+D+PYLKP+VALVLGFVG KMCAE+FHY++ +G+SL VV  +L+ G  AS+  NR+R
Sbjct:   89 ILAFAAILLASSVKLLTEKEDEDGD---LSNNIVLRISKFFVRSTDKYEGEKFFTVVDGKKMATPLLLCLVCIELSDFVFAVDSIPAVLGVSKDTFIVYSSNVFAILALRSLYTLVSHAITDLPYLKPSVALVLGFVGLKMCAEYFHYEIGIGVSLSVVAVLLSGGVGASIWDNRRR 262          
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: A0A7S2Y1S8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1S8_9STRA)

HSP 1 Score: 209 bits (532), Expect = 8.190e-64
Identity = 106/177 (59.89%), Postives = 137/177 (77.40%), Query Frame = 0
Query:    1 MLFFAGVLVVSSLNLLIGGEEDHADSSHLENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRKR 177
            +L FAG+L+ SS  L    E D      L +N++LKI+N +F SVD+YDGEKFFT V+GV+ ATPLL+CL+CIEL+DFVFAVDSIPAV+G++ D FIVY+SN+FAI A+RS+Y LV+ A++D+PYL+PAVALVL FVGAKM AEFFHY++   ISL VV  +L  G   SVV N+ +
Sbjct:  181 ILLFAGILLASSWKLFFEEEGDE----DLSDNVILKISNKMFKSVDHYDGEKFFTKVNGVRHATPLLMCLVCIELSDFVFAVDSIPAVIGVTKDPFIVYSSNMFAIMALRSLYVLVAQAVTDLPYLRPAVALVLAFVGAKMIAEFFHYELSTAISLAVVAAVLGGGIALSVVHNKAK 353          
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: A0A7S3XZU5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZU5_HETAK)

HSP 1 Score: 209 bits (532), Expect = 1.780e-63
Identity = 105/175 (60.00%), Postives = 137/175 (78.29%), Query Frame = 0
Query:    2 LFFAGVLVVSSLNLLIGGEEDHADSSHLENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRK 176
            L FAG+L+ S   ++   EE+      LE+N+++K++N +  S   YDGEKFFT +DGVK ATPLL+CLICIEL+DFVFAVDSIPAV+G++ D FIVY+SN+FAI A+RS+YTLV+ A+ D+PYLKPAVALVLGFVG KM AE+FHY+V +GISL VV  +L  G +ASV++  K
Sbjct:  196 LLFAGILIFSGYKMINESEEEE----DLEDNVIMKLSNKMVKSTTQYDGEKFFTKIDGVKYATPLLMCLICIELSDFVFAVDSIPAVIGVTKDPFIVYSSNLFAIAALRSLYTLVAKAVDDLPYLKPAVALVLGFVGCKMAAEYFHYEVGIGISLGVVGILLGGGIVASVIAKNK 366          
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: F0YKF0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKF0_AURAN)

HSP 1 Score: 195 bits (496), Expect = 7.760e-59
Identity = 98/177 (55.37%), Postives = 132/177 (74.58%), Query Frame = 0
Query:    2 LFFAGVLVVSSLNLLIGGEEDHADSSHL-ENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRKR 177
            L FAG+L+ SS  LL+  E+DH D   + EN +V+++   L   VDY+DG+KFFTLVDG K ATPLLLC++CIEL+DFVFAVDSIPAVL IS D FIVY+SN+FAI A+RS+Y +++ AI+++PYL+PAVAL+LGFVG KM AE+FH  +    SL ++   L  G   S++  R++
Sbjct:  150 LVFAGILLASSYKLLV--EDDHGDGGEMGENAVVVRLGRKLCGGVDYFDGDKFFTLVDGAKVATPLLLCVVCIELSDFVFAVDSIPAVLAISKDPFIVYSSNIFAIAALRSLYQVLAAAIAELPYLRPAVALILGFVGVKMLAEYFHVHIPTATSLAIICATLGGGVALSLLDKRRQ 324          
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: A0A7S1UHU3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHU3_9STRA)

HSP 1 Score: 195 bits (495), Expect = 1.010e-58
Identity = 96/177 (54.24%), Postives = 131/177 (74.01%), Query Frame = 0
Query:    1 MLFFAGVLVVSSLNLLIGGEEDHADSSHLENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRKR 177
            ML FAG+L+V++  L+        +   L +N ++ ++  + ++VDYYD EKFFT+ +G+++ATPLLLCL+CIEL+DFVFAVDSIPAVLG+S D FIVY SN+FAI A+RS+Y LV+ AI DMPYLKPAV LVLGFVG KM  E++HY+V   +SL V+ GIL    + S++   K+
Sbjct:  129 MLLFAGLLLVAAGRLVKESFAVEEEEEDLSSNWIMNVSRKMVNAVDYYDDEKFFTMSNGIQRATPLLLCLVCIELSDFVFAVDSIPAVLGVSKDPFIVYTSNIFAIAALRSLYVLVAKAIDDMPYLKPAVGLVLGFVGCKMLGEYYHYEVSTAVSLAVIMGILGGSIVLSLIFPPKK 305          
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: A0A7S2SRH4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRH4_9STRA)

HSP 1 Score: 191 bits (486), Expect = 1.010e-57
Identity = 96/176 (54.55%), Postives = 132/176 (75.00%), Query Frame = 0
Query:    1 MLFFAGVLVVSSLNLLIGGEEDHADSSHLENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRK 176
            +L FAG+L+ S++ L    E +      L  N V++IA  L  SVDY+DG  FFT+V+GV++ATPLLLC++CIEL+DFVFAVDSIPAVL IS D  IV +SN+FAI A+RS+YTLV+ A++D+PYL+PAVAL+LGFVG KM  E+FH ++  G+SL VV  +L+ G   S++S ++
Sbjct:  116 ILVFAGILMASAVKLFFENEAEE----DLSENAVMRIAKSLCPSVDYFDGSNFFTMVNGVRRATPLLLCVVCIELSDFVFAVDSIPAVLSISKDQLIVLSSNIFAIMALRSLYTLVARAVNDLPYLRPAVALILGFVGTKMALEYFHVEISTGLSLSVVAALLSGGIGLSLISQKR 287          
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: A0A7S2RH37_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH37_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.570e-57
Identity = 92/177 (51.98%), Postives = 133/177 (75.14%), Query Frame = 0
Query:    1 MLFFAGVLVVSSLNLLIGGEEDHADSSHLENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRKR 177
            +L FA +L++S++ L    +E       L NN V++++ +   +V+ YDG+KFFT++DG ++ATPLLLCL+CIEL+DFVFAVDSIPAV+G+S D  IVY+SN+FAI  +RS+YTLV+ A+ D+PYL+PAVALVL F+G KM  EFFHY++ + +SL VV  +LA G + S++  + R
Sbjct:  111 ILLFAAILMLSAVKLFFESDEPE----DLSNNTVMRLSKFAVGAVEEYDGDKFFTILDGQRRATPLLLCLVCIELSDFVFAVDSIPAVIGVSQDLLIVYSSNIFAIMGLRSLYTLVAKAVQDLPYLRPAVALVLAFIGLKMVMEFFHYEISISLSLGVVVTLLASGIVLSLIHKKPR 283          
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: F0Y6P3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6P3_AURAN)

HSP 1 Score: 187 bits (476), Expect = 6.540e-56
Identity = 93/176 (52.84%), Postives = 133/176 (75.57%), Query Frame = 0
Query:    2 LFFAGVLVVSSLNLLIGGEEDHADSSHLENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRKR 177
            L FAG+L++SS+ LL+ G+ED      + +N+V++++  L  +   YDG++FFT+VDG K+ATPLLLCL+C+EL+D VFAVDSIPAVLGIS D F+VY+SNVFAI  +R++Y LV+ A+  M YLKPAV  VL F+  KM  E+FHY +  G SL VV  +LA+GA AS+++++++
Sbjct:  109 LLFAGILLLSSVKLLMEGDEDE----DVGDNLVMRLSRKLVGATTEYDGDRFFTVVDGAKRATPLLLCLVCVELSDVVFAVDSIPAVLGISTDPFVVYSSNVFAIAGLRALYALVAKAVDSMVYLKPAVCAVLVFISVKMILEYFHYAIGTGASLCVVVCLLALGAAASLLASKRK 280          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEA4_ECTSI3.780e-9381.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWN8_9PHAE9.290e-9181.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZA94_9STRA3.560e-7164.97Integral membrane protein TerC family-domain-conta... [more]
A0A7S2Y1S8_9STRA8.190e-6459.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XZU5_HETAK1.780e-6360.00Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
F0YKF0_AURAN7.760e-5955.37Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1UHU3_9STRA1.010e-5854.24Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SRH4_9STRA1.010e-5754.55Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S2RH37_9STRA1.570e-5751.98Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0Y6P3_AURAN6.540e-5652.84Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005496Integral membrane protein TerCPFAMPF03741TerCcoord: 2..144
e-value: 4.1E-24
score: 85.3
NoneNo IPR availablePANTHERPTHR30238MEMBRANE BOUND PREDICTED REDOX MODULATORcoord: 2..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..172
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 147..151
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..116
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 117..127
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 173..177
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 128..146
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.649
NoneNo IPR availableTMHMMTMhelixcoord: 129..148
NoneNo IPR availableTMHMMTMhelixcoord: 95..117
NoneNo IPR availableTMHMMTMhelixcoord: 152..174
IPR022369Integral membrane protein TerC, riboswitch-linkedPANTHERPTHR30238:SF0THYLAKOID MEMBRANE PROTEIN TERC, CHLOROPLASTICcoord: 2..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79671contigH-elongata_contig79671:679..2125 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79671.15621.1mRNA_H-elongata_contig79671.15621.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig79671 679..2149 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig79671.15621.1 ID=prot_H-elongata_contig79671.15621.1|Name=mRNA_H-elongata_contig79671.15621.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=177bp
MLFFAGVLVVSSLNLLIGGEEDHADSSHLENNIVLKIANWLFDSVDYYDG
EKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYA
SNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKV
DVGISLLVVTGILAVGAIASVVSNRKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005496Integral_membrane_TerC
IPR022369Integral_membrane_TerC_rswitch