mRNA_H-elongata_contig79671.15621.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: D8LEA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA4_ECTSI) HSP 1 Score: 290 bits (741), Expect = 5.600e-95 Identity = 148/183 (80.87%), Postives = 163/183 (89.07%), Query Frame = 1
Query: 10 RARWVMLFFAGVLVVSSLNLLIGG-EEDHADSSHLENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRKR 555
R R VML FAG+LVVSS LL+ G EEDHADSS LE N+VL++ANW+ DS DYYDGEKFFTLVDG KKATPLLLCLICIE+TDFVFAVDSIPAVL IS DTFIVYASNVFAICAMRSIYTLVSHAISD+PYLKPAVALVLGFVG KM AEFFHY++ VG SL VV G+LA+GAIASV+SN++R
Sbjct: 41 RFRGVMLVFAGILVVSSFKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLTVVCGLLAIGAIASVISNKRR 223
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: A0A6H5JWN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWN8_9PHAE) HSP 1 Score: 289 bits (740), Expect = 1.440e-92 Identity = 148/183 (80.87%), Postives = 163/183 (89.07%), Query Frame = 1
Query: 10 RARWVMLFFAGVLVVSSLNLLIGG-EEDHADSSHLENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRKR 555
R R VML FAG+LVVSSL LL+ G EEDHADSS LE N+VL++ANW+ DS DYYDGEKFFTLVDG KKATPLLLCLICIE+TDFVFAVDSIPAVL IS DTFIVYASNVFAICAMRSIYTLVSHAISD+PYLKPAVALVLGFVG KM AEFFHY++ VG SL VV G+LA+G IASV+SN++R
Sbjct: 228 RFRGVMLVFAGILVVSSLKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLSVVCGLLAIGVIASVISNKRR 410
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: A0A835ZA94_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA94_9STRA) HSP 1 Score: 230 bits (586), Expect = 5.190e-73 Identity = 118/182 (64.84%), Postives = 147/182 (80.77%), Query Frame = 1
Query: 10 RARWVMLFFAGVLVVSSLNLLIGGEEDHADSSHLENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRKR 555
R R V+L FA +L+ SS+ LL E++ D L NNIVL+I+ + S D Y+GEKFFT+VDG K ATPLLLCL+CIEL+DFVFAVDSIPAVLG+S DTFIVY+SNVFAI A+RS+YTLVSHAI+D+PYLKP+VALVLGFVG KMCAE+FHY++ +G+SL VV +L+ G AS+ NR+R
Sbjct: 84 RFRGVILAFAAILLASSVKLLTEKEDEDGD---LSNNIVLRISKFFVRSTDKYEGEKFFTVVDGKKMATPLLLCLVCIELSDFVFAVDSIPAVLGVSKDTFIVYSSNVFAILALRSLYTLVSHAITDLPYLKPSVALVLGFVGLKMCAEYFHYEIGIGVSLSVVAVLLSGGVGASIWDNRRR 262
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: A0A7S2Y1S8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1S8_9STRA) HSP 1 Score: 213 bits (541), Expect = 4.920e-65 Identity = 108/182 (59.34%), Postives = 140/182 (76.92%), Query Frame = 1
Query: 10 RARWVMLFFAGVLVVSSLNLLIGGEEDHADSSHLENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRKR 555
+ R V+L FAG+L+ SS L E D L +N++LKI+N +F SVD+YDGEKFFT V+GV+ ATPLL+CL+CIEL+DFVFAVDSIPAV+G++ D FIVY+SN+FAI A+RS+Y LV+ A++D+PYL+PAVALVL FVGAKM AEFFHY++ ISL VV +L G SVV N+ +
Sbjct: 176 KFRVVILLFAGILLASSWKLFFEEEGDE----DLSDNVILKISNKMFKSVDHYDGEKFFTKVNGVRHATPLLMCLVCIELSDFVFAVDSIPAVIGVTKDPFIVYSSNMFAIMALRSLYVLVAQAVTDLPYLRPAVALVLAFVGAKMIAEFFHYELSTAISLAVVAAVLGGGIALSVVHNKAK 353
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: A0A7S3XZU5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZU5_HETAK) HSP 1 Score: 212 bits (540), Expect = 1.520e-64 Identity = 107/181 (59.12%), Postives = 140/181 (77.35%), Query Frame = 1
Query: 10 RARWVMLFFAGVLVVSSLNLLIGGEEDHADSSHLENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRK 552
+ R V L FAG+L+ S ++ EE+ LE+N+++K++N + S YDGEKFFT +DGVK ATPLL+CLICIEL+DFVFAVDSIPAV+G++ D FIVY+SN+FAI A+RS+YTLV+ A+ D+PYLKPAVALVLGFVG KM AE+FHY+V +GISL VV +L G +ASV++ K
Sbjct: 190 KFRSVTLLFAGILIFSGYKMINESEEEE----DLEDNVIMKLSNKMVKSTTQYDGEKFFTKIDGVKYATPLLMCLICIELSDFVFAVDSIPAVIGVTKDPFIVYSSNLFAIAALRSLYTLVAKAVDDLPYLKPAVALVLGFVGCKMAAEYFHYEVGIGISLGVVGILLGGGIVASVIAKNK 366
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: F0YKF0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKF0_AURAN) HSP 1 Score: 201 bits (510), Expect = 8.180e-61 Identity = 102/186 (54.84%), Postives = 136/186 (73.12%), Query Frame = 1
Query: 1 LTGRARWVMLFFAGVLVVSSLNLLIGGEEDHADSSHL-ENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRKR 555
L R R V L FAG+L+ SS LL+ E+DH D + EN +V+++ L VDY+DG+KFFTLVDG K ATPLLLC++CIEL+DFVFAVDSIPAVL IS D FIVY+SN+FAI A+RS+Y +++ AI+++PYL+PAVAL+LGFVG KM AE+FH + SL ++ L G S++ R++
Sbjct: 141 LVNRFRSVTLVFAGILLASSYKLLV--EDDHGDGGEMGENAVVVRLGRKLCGGVDYFDGDKFFTLVDGAKVATPLLLCVVCIELSDFVFAVDSIPAVLAISKDPFIVYSSNIFAIAALRSLYQVLAAAIAELPYLRPAVALILGFVGVKMLAEYFHVHIPTATSLAIICATLGGGVALSLLDKRRQ 324
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: A0A7S1UHU3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHU3_9STRA) HSP 1 Score: 199 bits (507), Expect = 2.130e-60 Identity = 99/182 (54.40%), Postives = 134/182 (73.63%), Query Frame = 1
Query: 10 RARWVMLFFAGVLVVSSLNLLIGGEEDHADSSHLENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRKR 555
R R VML FAG+L+V++ L+ + L +N ++ ++ + ++VDYYD EKFFT+ +G+++ATPLLLCL+CIEL+DFVFAVDSIPAVLG+S D FIVY SN+FAI A+RS+Y LV+ AI DMPYLKPAV LVLGFVG KM E++HY+V +SL V+ GIL + S++ K+
Sbjct: 124 RFRVVMLLFAGLLLVAAGRLVKESFAVEEEEEDLSSNWIMNVSRKMVNAVDYYDDEKFFTMSNGIQRATPLLLCLVCIELSDFVFAVDSIPAVLGVSKDPFIVYTSNIFAIAALRSLYVLVAKAIDDMPYLKPAVGLVLGFVGCKMLGEYYHYEVSTAVSLAVIMGILGGSIVLSLIFPPKK 305
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: A0A7S2RH37_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH37_9STRA) HSP 1 Score: 196 bits (498), Expect = 4.690e-59 Identity = 94/182 (51.65%), Postives = 136/182 (74.73%), Query Frame = 1
Query: 10 RARWVMLFFAGVLVVSSLNLLIGGEEDHADSSHLENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRKR 555
+ R V+L FA +L++S++ L +E L NN V++++ + +V+ YDG+KFFT++DG ++ATPLLLCL+CIEL+DFVFAVDSIPAV+G+S D IVY+SN+FAI +RS+YTLV+ A+ D+PYL+PAVALVL F+G KM EFFHY++ + +SL VV +LA G + S++ + R
Sbjct: 106 KFRMVILLFAAILMLSAVKLFFESDEPE----DLSNNTVMRLSKFAVGAVEEYDGDKFFTILDGQRRATPLLLCLVCIELSDFVFAVDSIPAVIGVSQDLLIVYSSNIFAIMGLRSLYTLVAKAVQDLPYLRPAVALVLAFIGLKMVMEFFHYEISISLSLGVVVTLLASGIVLSLIHKKPR 283
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: F0Y6P3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6P3_AURAN) HSP 1 Score: 196 bits (497), Expect = 6.100e-59 Identity = 96/182 (52.75%), Postives = 136/182 (74.73%), Query Frame = 1
Query: 10 RARWVMLFFAGVLVVSSLNLLIGGEEDHADSSHLENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRKR 555
R RW L FAG+L++SS+ LL+ G+ED + +N+V++++ L + YDG++FFT+VDG K+ATPLLLCL+C+EL+D VFAVDSIPAVLGIS D F+VY+SNVFAI +R++Y LV+ A+ M YLKPAV VL F+ KM E+FHY + G SL VV +LA+GA AS+++++++
Sbjct: 103 RFRWTSLLFAGILLLSSVKLLMEGDEDE----DVGDNLVMRLSRKLVGATTEYDGDRFFTVVDGAKRATPLLLCLVCVELSDVVFAVDSIPAVLGISTDPFVVYSSNVFAIAGLRALYALVAKAVDSMVYLKPAVCAVLVFISVKMILEYFHYAIGTGASLCVVVCLLALGAAASLLASKRK 280
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Match: A0A7S2SRH4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRH4_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.200e-58 Identity = 98/179 (54.75%), Postives = 134/179 (74.86%), Query Frame = 1
Query: 16 RWVMLFFAGVLVVSSLNLLIGGEEDHADSSHLENNIVLKIANWLFDSVDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLGISHDTFIVYASNVFAICAMRSIYTLVSHAISDMPYLKPAVALVLGFVGAKMCAEFFHYKVDVGISLLVVTGILAVGAIASVVSNRK 552
R V+L FAG+L+ S++ L E + L N V++IA L SVDY+DG FFT+V+GV++ATPLLLC++CIEL+DFVFAVDSIPAVL IS D IV +SN+FAI A+RS+YTLV+ A++D+PYL+PAVAL+LGFVG KM E+FH ++ G+SL VV +L+ G S++S ++
Sbjct: 113 RPVILVFAGILMASAVKLFFENEAEE----DLSENAVMRIAKSLCPSVDYFDGSNFFTMVNGVRRATPLLLCVVCIELSDFVFAVDSIPAVLSISKDQLIVLSSNIFAIMALRSLYTLVARAVNDLPYLRPAVALILGFVGTKMALEYFHVEISTGLSLSVVAALLSGGIGLSLISQKR 287 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79671.15621.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig79671.15621.1 >prot_H-elongata_contig79671.15621.1 ID=prot_H-elongata_contig79671.15621.1|Name=mRNA_H-elongata_contig79671.15621.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=177bp MLFFAGVLVVSSLNLLIGGEEDHADSSHLENNIVLKIANWLFDSVDYYDGback to top mRNA from alignment at H-elongata_contig79671:679..2149- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig79671.15621.1 ID=mRNA_H-elongata_contig79671.15621.1|Name=mRNA_H-elongata_contig79671.15621.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1471bp|location=Sequence derived from alignment at H-elongata_contig79671:679..2149- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig79671:679..2149- >mRNA_H-elongata_contig79671.15621.1 ID=mRNA_H-elongata_contig79671.15621.1|Name=mRNA_H-elongata_contig79671.15621.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1062bp|location=Sequence derived from alignment at H-elongata_contig79671:679..2149- (Himanthalia elongata Himel1 dioecious)back to top |