mRNA_H-elongata_contig79658.15618.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig79658.15618.1 vs. uniprot
Match: D7G351_ECTSI (G-patch domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G351_ECTSI) HSP 1 Score: 232 bits (592), Expect = 7.250e-69 Identity = 146/288 (50.69%), Postives = 168/288 (58.33%), Query Frame = 1
Query: 166 GPARKGFFCGVCEERVTSQTEDQHRTSTLHIFNQQLRPSERKVQLDESNRGFQLLAGMGWKLDEGLGARGQGRVDPLQTTFKRDTAGLGAGERLRPRVTHFPTHVPSQELNAPDGKSDAVRAQEALDRRRRGINGDSRSVGRRYAIRKEQG--PRTRCDEQGXXXXXXXXXDRRIKGGVSCRDKGVPTEGRESVAEGVTRGFWGQQTHPGTVPAVAVAATIPGGDAHTRAGW---ARLKGAQKSRRGIGSGAFMSKGEQRRREERERRKEHKTRLELFSDVPEELASL 1014
G A KGFFC VC ERV S +E++H TSTLHIFNQQ RP RKVQ+ ESN+GFQLLAGMGWKLDEGLG+R QGRV+PLQTTFKRDT GLGAG +LRPRVTHFP+HVPSQ LNAPDGKSDAVRA E LDR R + G ++ G R D G R GG + D GFWGQ TH + A R +G KS G +G+F+++ E+ ERERRKE R EL SDVPEE A+L
Sbjct: 99 GGAEKGFFCRVCGERVASLSEEKHNTSTLHIFNQQHRPQGRKVQIHESNKGFQLLAGMGWKLDEGLGSRKQGRVNPLQTTFKRDTTGLGAGGKLRPRVTHFPSHVPSQALNAPDGKSDAVRAHERLDRGR--LGGXXXXXXXXXXXXRDGGGCSGNRLDASGESSGVNAEPSARAGGGGAAGDS--------------WGGFWGQGTHSXXXXXXXXXXXXCRSTGESTAXXXXAGRREGRGKS--GHETGSFLTRREREAELERERRKERTARFELLSDVPEEYAAL 368
BLAST of mRNA_H-elongata_contig79658.15618.1 vs. uniprot
Match: UPI00201E9FE9 (G patch domain and ankyrin repeat-containing protein 1-like isoform X1 n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201E9FE9) HSP 1 Score: 104 bits (259), Expect = 7.380e-21 Identity = 49/119 (41.18%), Postives = 70/119 (58.82%), Query Frame = 1
Query: 115 FSSSSGGRPDDDAVVVYGPARKGFFCGVCEERVTSQTEDQHRTSTLHIFNQQLRPSERKVQLDESNRGFQLLAGMGWKLDEGLGARGQGRVDPLQTTFKRDTAGLGAGERLRPRVTHFP 471
F SS G + V +GFFC +C+ + TE H+TST+H+FN QL+P + + ESN G+Q++ GW D GLG R +G+ P++T KR+ GLG ++ PRVTHFP
Sbjct: 232 FQSSDDGSSSNQRVTN----EEGFFCEICKRHFSEGTERSHKTSTVHLFNCQLKPKKPSYLISESNVGYQMMLRSGWNADRGLGPREEGQKYPVKTVLKRNREGLGGEQKSTPRVTHFP 346
BLAST of mRNA_H-elongata_contig79658.15618.1 vs. uniprot
Match: UPI001EE50FC1 (G patch domain and ankyrin repeat-containing protein 1-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE50FC1) HSP 1 Score: 99.4 bits (246), Expect = 5.090e-20 Identity = 43/98 (43.88%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 178 KGFFCGVCEERVTSQTEDQHRTSTLHIFNQQLRPSERKVQLDESNRGFQLLAGMGWKLDEGLGARGQGRVDPLQTTFKRDTAGLGAGERLRPRVTHFP 471
+ FFC +C+ + TE HRTST+H+FN QL+P + + ESN G+Q++ GW D GLG + +G+ P++T KR+ GLG + PRVTHFP
Sbjct: 113 ESFFCEICKRHFSEGTELSHRTSTVHLFNCQLKPKQTSYLISESNIGYQMMLRSGWNADRGLGPQEEGQKYPVKTVLKRNREGLGGERKSTPRVTHFP 210
BLAST of mRNA_H-elongata_contig79658.15618.1 vs. uniprot
Match: UPI001B888029 (G patch domain and ankyrin repeat-containing protein 1-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B888029) HSP 1 Score: 100 bits (248), Expect = 2.290e-19 Identity = 44/109 (40.37%), Postives = 67/109 (61.47%), Query Frame = 1
Query: 151 AVVVYGPARKGFFCGVCEERVTSQTEDQHRTSTLHIFNQQLRPSERKVQLDESNRGFQLLAGMGWKLDEGLGARGQGRVDPLQTTFKRDTAGLGAGERLRPRVTHFPTH 477
++V+ R FFC VC++ + QH+TST+H+FN QL+P + ESN G+++L GW +D+GLG G G P++T KRD GLG+ +++ +VTHF H
Sbjct: 247 SMVLNTDTRTTFFCTVCKQEFVDTNQRQHQTSTVHLFNMQLKPKSNNYLIPESNVGYRMLLRGGWDVDKGLGPDGSGNKFPVKTVLKRDRKGLGSEQKVPAKVTHFNPH 355
BLAST of mRNA_H-elongata_contig79658.15618.1 vs. uniprot
Match: UPI001EE5B104 (G patch domain and ankyrin repeat-containing protein 1-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5B104) HSP 1 Score: 99.4 bits (246), Expect = 3.470e-19 Identity = 43/98 (43.88%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 178 KGFFCGVCEERVTSQTEDQHRTSTLHIFNQQLRPSERKVQLDESNRGFQLLAGMGWKLDEGLGARGQGRVDPLQTTFKRDTAGLGAGERLRPRVTHFP 471
+ FFC +C+ + TE HRTST+H+FN QL+P + + ESN G+Q++ GW D GLG + +G+ P++T KR+ GLG + PRVTHFP
Sbjct: 238 ESFFCEICKRHFSEGTELSHRTSTVHLFNCQLKPKQTSYLISESNIGYQMMLRSGWNADRGLGPQEEGQKYPVKTVLKRNREGLGGERKSTPRVTHFP 335
BLAST of mRNA_H-elongata_contig79658.15618.1 vs. uniprot
Match: UPI000719C8E4 (G patch domain and ankyrin repeat-containing protein 1-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719C8E4) HSP 1 Score: 88.6 bits (218), Expect = 1.560e-15 Identity = 45/119 (37.82%), Postives = 66/119 (55.46%), Query Frame = 1
Query: 112 CFSSSSGGRPDDDAVVVYGPARKGFFCGVCEERVTSQTEDQHRTSTLHIFNQQLRPSERKVQLDESNRGFQLLAGMGWKLDEGLGARGQGRVDPLQTTFKRDTAGLGAGERLRPRVTHF 468
C + +S R G FC VC V +++++H +ST+H+FN QL+P + ESN GFQL+ GW D GLG G G+ P++T KRD GLG+ ++ + +VTHF
Sbjct: 214 CPADASDARLAPSVSGGSGEGASRAFCDVCGVHV-DRSDERHSSSTVHLFNLQLKPKSTLYHIPESNLGFQLMLRTGWDKDAGLGPVGSGQKFPVKTVLKRDRQGLGSKKKTKAKVTHF 331
BLAST of mRNA_H-elongata_contig79658.15618.1 vs. uniprot
Match: UPI0014551633 (G patch domain and ankyrin repeat-containing protein 1 homolog n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014551633) HSP 1 Score: 78.6 bits (192), Expect = 3.650e-12 Identity = 42/100 (42.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query: 187 FCGVC--EERVTSQTEDQHRTSTLHIFNQQLRPSERKVQLDESNRGFQLLAGMGWKLDEGLGARGQGRVDPLQTTFKRDTAGLGAGER----LRPRVTHF 468
+C +C E R QH++ST+H FN Q +P+ + ESN GFQL+ GW ++GLG G G+ P++T KRD GLGA +R + RVTHF
Sbjct: 242 WCDICRLEYRKHESRRHQHKSSTVHQFNCQHKPTSTMYYIPESNVGFQLMMKEGWDKEKGLGRDGAGQKFPVKTILKRDRKGLGAADREDEASKARVTHF 341
BLAST of mRNA_H-elongata_contig79658.15618.1 vs. uniprot
Match: W4FNY5_9STRA (G-patch domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FNY5_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.400e-11 Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 289 KVQLDESNRGFQLLAGMGWKLDEGLGARGQGRVDPLQTTFKRDTAGLGAGERLRPRVTH 465
K ++ SN+G+++LAGMGWK EGLG QGR +P+ T FKRD AGLG ++LR RVTH
Sbjct: 5 KQEIPASNKGYKMLAGMGWKAGEGLGVDKQGRTEPVPTCFKRDRAGLGK-KKLRLRVTH 62
BLAST of mRNA_H-elongata_contig79658.15618.1 vs. uniprot
Match: A0A8H7S4I8_9FUNG (G-patch domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S4I8_9FUNG) HSP 1 Score: 73.6 bits (179), Expect = 2.500e-11 Identity = 39/103 (37.86%), Postives = 55/103 (53.40%), Query Frame = 1
Query: 184 FFCGVCEERVTSQTEDQHRTSTLHIFNQQLRPSERK-VQLDESNRGFQLLAGMGWKLDEGLGARGQGRVDPLQTTFKRDTAGLGAGERLRPRVTHFPTHVPSQ 489
+C CE V +QH +H + + + + L+ SN GFQLL GWK +EGLG +GQGR P+ T K+DT GLG + + R+TH T + Q
Sbjct: 76 LWCPDCELNVPLSFLEQHVRGIVHRTSSSTSTTPTEFLALNGSNIGFQLLKSQGWKYEEGLGPKGQGRRHPIATALKQDTLGLGHEKSTKRRITHTATEIEEQ 178
BLAST of mRNA_H-elongata_contig79658.15618.1 vs. uniprot
Match: UPI000540165A (G patch domain and ankyrin repeat-containing protein 1 homolog n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI000540165A) HSP 1 Score: 65.5 bits (158), Expect = 2.150e-9 Identity = 37/91 (40.66%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 298 LDESNRGFQLLAGMGWKLDEGLGARGQGRVDPLQTTFKRDTAGLGAGERLRPRVTHFPTHVPSQ----ELNAPDGKSDAVRAQEALDRRRR 558
LD SN GFQLL GWK GLGA QGR++P++T FK++ G+GA E+++ ++ H T PS E + K+ + R ++ LD +R
Sbjct: 15 LDSSNIGFQLLKKHGWKEGTGLGASQQGRLEPVETYFKKNKRGVGA-EKVKKKILHLSTTTPSDKEKPEKMSKKAKALSKRMRKMLDEEKR 104 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79658.15618.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig79658.15618.1 >prot_H-elongata_contig79658.15618.1 ID=prot_H-elongata_contig79658.15618.1|Name=mRNA_H-elongata_contig79658.15618.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=231bp MGWKLDEGLGARGQGRVDPLQTTFKRDTAGLGAGERLRPRVTHFPTHVPSback to top mRNA from alignment at H-elongata_contig79658:285..2628- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig79658.15618.1 ID=mRNA_H-elongata_contig79658.15618.1|Name=mRNA_H-elongata_contig79658.15618.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2344bp|location=Sequence derived from alignment at H-elongata_contig79658:285..2628- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig79658:285..2628- >mRNA_H-elongata_contig79658.15618.1 ID=mRNA_H-elongata_contig79658.15618.1|Name=mRNA_H-elongata_contig79658.15618.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1386bp|location=Sequence derived from alignment at H-elongata_contig79658:285..2628- (Himanthalia elongata Himel1 dioecious)back to top |