prot_H-elongata_contig79607.15614.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig79607.15614.1
Unique Nameprot_H-elongata_contig79607.15614.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length411
Homology
BLAST of mRNA_H-elongata_contig79607.15614.1 vs. uniprot
Match: D8LS59_ECTSI (Dynein intermediate chain family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS59_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 1.230e-109
Identity = 265/433 (61.20%), Postives = 293/433 (67.67%), Query Frame = 0
Query:    1 SSSRIGISRVGFSRSRVGVSVGASGQGSAGYGGMRVFHDGVNVTPQSLLTSTMVDKPGKRGM-----------KAPGDAPVKRPSAGGGVAPRKKSSLSQSTGALQSAAITAGRAGGNAGG----TRSPS-RRKR--EGPADATGLTEEYLNAPITIELRETPTIMVLEIRGSAVATDLRDFGRYQQEKKDYEKRVQEWSVSDRTASRHTQTVNWALKAKEVTAAAASTKDASCAATAWEIFDEYSKKTDQGAADDGVYGSAGSKIEVSGEDTAMQRQANELATVTLASEGCLLETANTVAPPPLPQEATAEANRSGGTAG-VSTNVVNPNINRVQGIIGTGVVGDGXXXXXXXXXXXXTPTRKSSQSSLGAAGTATE-GRGSRLNTDGV--DLAEEEAESPMDVRGVAEVLAAQQVKKIMASEQLLCSLELV 411
            S S+IG+SR G S          SG    G GG+RVF +GVNVTPQSLLTS      G               KA GDAP+KRPS GGGVAPRKK SLS    A QSA   A   GG+        +SP+ RRKR  EG  + +GLTEE L+APITI L ETPT+M+LEIRGSAVATDLRDFGRYQQEK+DYEKRVQE   SDR ASRH QTVNWALK KEVTAAAA+TKDASCAAT WEIFDE SK TDQG ADDGVYG AGSK EV GE+TA+QRQA ELATVTLAS+GCLLETA+TVAP PLP EATA+  +S      VSTN VNPN +R +GI G       XXXXXXXXXXXX                    G  S++N DG   +LAE   E PMD RGVAEVLAAQQ +KIM S+QLL SLELV
Sbjct:   16 SRSKIGVSRAGGSXXXXXXXXXXSGTHGGGVGGVRVFLNGVNVTPQSLLTSASRSSAGNTSXXXXXXXXXXXXKASGDAPIKRPS-GGGVAPRKKPSLSVE--AQQSAPAAARSEGGHXXXXXXXAKSPAGRRKRAGEGAGEESGLTEEDLSAPITIGLCETPTMMLLEIRGSAVATDLRDFGRYQQEKQDYEKRVQEKIGSDRFASRHAQTVNWALKTKEVTAAAAATKDASCAATTWEIFDEQSKATDQGVADDGVYGGAGSKAEVGGEETAVQRQAGELATVTLASDGCLLETASTVAPAPLPSEATADTGKSXXXXXXVSTNAVNPNASRARGISGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGASKVNLDGGGGELAEA-VELPMDSRGVAEVLAAQQAEKIMVSKQLLDSLELV 444          
BLAST of mRNA_H-elongata_contig79607.15614.1 vs. uniprot
Match: A0A835YZL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZL2_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.520e-26
Identity = 78/167 (46.71%), Postives = 103/167 (61.68%), Query Frame = 0
Query:  128 LTEEYLNAPITIELRETPTIMVLEIRGSAVATDLRDFGRYQQEKKDYEKRVQEWSVSDRTASRHTQTVNWALKAKEVTAAAASTKDASCAATAWEIFDEYSKKTDQGAADDGVY-----GSAGSKIEVSGEDTAMQRQANELATVTLASEGCLLETANTVAPPPLPQ 289
            LTE+ L AP+T+ L+ETPTIM+LEIRGSAVATD RD+ +YQ+EK++Y++RV     S+    RHTQT+NW  K KE  A  A TKDA+ +   WEI+D  + +                G A + + VS +   M  +A       LA+ GCLLET +TVAPPPLPQ
Sbjct:  236 LTEDKLAAPVTLLLQETPTIMLLEIRGSAVATDFRDYDKYQREKQEYDRRVAAKQGSETAQERHTQTLNWPPKHKEAMAVPAPTKDAAASVLPWEIYDAAATQLSIAXXXXXXXXXCHAGGALASVGVSAQVADMVARA-------LAAPGCLLETEHTVAPPPLPQ 395          
BLAST of mRNA_H-elongata_contig79607.15614.1 vs. uniprot
Match: A0A7S1CCT2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCT2_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 5.750e-16
Identity = 89/288 (30.90%), Postives = 134/288 (46.53%), Query Frame = 0
Query:   27 GSAGYGGMRVFHDGVNVTPQSLLTSTMVDKPGKRGMKAPGDAPVKRPSAGGGVAP---------RKKSSLSQSTGALQSAAITAGRAGGNAGGTRSPSRRKREG------------PADATGLTEEYLNAPITIELRETPTIMVLEIRGSAVATDLRDFGRYQQEKKDYEKRVQEW--SVSDRTASRHTQTVNWALKAKEVTAAAASTKDASCAATAWEIFDEYSKKTDQGAADDGVYGSAGSKIEVSGED---------TAMQRQANELATVTLASEGCLLETANTV 282
            G+AG G  R++  G + TPQSLL +   D PG    K  G  P    S GG  +P         R  S  S+S+     +A T G A     G    S    EG              +A  LT   L  P+++ L ET T  +L + G  V  + ++     ++  +Y++   ++    +D    RHTQT+NWA K KEVTAA  +T+DA C AT W+I+D +       AA++    +  + +E+ G+D         T ++RQ +E+    LAS GCLL+   +V
Sbjct:   61 GAAG-GVPRIYFKGRDATPQSLLIAKPTDTPGMPSGKG-GGPPRSAVSNGGATSPDAGGDNVMDRLSSGFSRSS----LSARTRGSAEDGEEGYDLASPLVEEGGDEEAELEATADDDEALDLTPAELEMPVSLTLSETETFTLLNLPGVRVQQETKEHDDATKKNAEYDEVCAQYMKGSADMYGHRHTQTLNWAQKNKEVTAAPPATRDAGCVATTWDIYDAF-------AAEEVALNAESADLEMGGKDKRSDPKAGMTELERQVDEVVAAALASPGCLLDAEGSV 335          
BLAST of mRNA_H-elongata_contig79607.15614.1 vs. uniprot
Match: T0R719_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R719_SAPDV)

HSP 1 Score: 69.7 bits (169), Expect = 4.640e-9
Identity = 53/151 (35.10%), Postives = 75/151 (49.67%), Query Frame = 0
Query:  130 EEYLNAPITIELRETPTIMVLEIRGSAVATDLRDFGRYQQEKKDYEKRVQEWSVSDRTASRHTQTVNWALKAKEVTAAAASTKDASCAATAWEIFD--EYSKKTDQGAADDGVYGSAGSKIEVSGE--DTAMQRQANELATVTLASEGCLL 276
            ++ ++ P+TI   ETPTIM+ E+    V  D    G    + K Y +       SD      TQT+  A K KEV  A  +T+D SC AT W+IFD  + + +      DDG   S  SK +   +  D  + RQ +E+   +LAS GCLL
Sbjct:  185 KKVVSGPVTILFSETPTIMLFELLSVCVGQDTPVHGVIVTKNKKYLEMCSGKKGSDNYIENRTQTLQLAQKTKEVMTAPPATRDVSCNATDWDIFDCAQTNDEVQGNEHDDGADPSRPSKTQQDADNVDAQLARQVDEIVNASLASPGCLL 335          
BLAST of mRNA_H-elongata_contig79607.15614.1 vs. uniprot
Match: A0A067CXT8_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CXT8_SAPPC)

HSP 1 Score: 68.6 bits (166), Expect = 9.440e-9
Identity = 56/151 (37.09%), Postives = 74/151 (49.01%), Query Frame = 0
Query:  130 EEYLNAPITIELRETPTIMVLEIRGSAVATDLRDFGRYQQEKKDYEKRVQEWSVSDRTASRHTQTVNWALKAKEVTAAAASTKDASCAATAWEIFDEYSKKTD-QGAA-DDGVYGSAGSKIEVSGE--DTAMQRQANELATVTLASEGCLL 276
            ++ +  P+TI   ETPTIM+ E+    V  D    G    + K Y +       SD      TQT+  A K KEV  A  +T+D SC AT W+IFD      D QG   DDG   S  SK +   +  D  + RQ +E+   +LAS GCLL
Sbjct:  182 KKSITGPVTILFSETPTIMLFELLSVCVGQDTPVHGVIVTKNKKYLEMCSAKKGSDNYIENRTQTLQLAQKTKEVMTAPPATRDVSCNATDWDIFDCTQTNDDVQGNEHDDGPDPSRPSKTQQDADNVDAQLARQVDEIVNASLASPGCLL 332          
BLAST of mRNA_H-elongata_contig79607.15614.1 vs. uniprot
Match: A0A5D6Y6X3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6X3_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 8.400e-8
Identity = 54/169 (31.95%), Postives = 79/169 (46.75%), Query Frame = 0
Query:  127 GLTEEYLNAPITIELRETPTIMVLEIRGSAVATDLRDFGRYQQEKKDYEKRVQEWSVSDRTASRHTQTVNWALKAKEVTAAAASTKDASCAATAWEIFD------EYSKKTDQGAADDGVY-------GSAGSKI-----EVSGEDTAMQRQANELATVTLASEGCLLE 277
            G  E+    PITI+L ETPT++V E+R   V++D           + Y +       SD+     +QT+  A K KEV  A  +T+D  C AT W+IFD      +   + D+  A D V        G+A SK      E    D  ++ Q +E+   TL S GC+L+
Sbjct:  243 GKPEKTRRRPITIQLAETPTMVVFELRSVCVSSDSSSHQAIAARNRQYLEMCAAKKGSDKYVEGRSQTLQLAQKGKEVMTAPPATRDVMCVATDWDIFDCARIEEDNQNEHDESGAMDTVAVAGNATPGAASSKSSRALSEYENGDLQLKHQVDEIVEATLVSPGCVLD 411          
BLAST of mRNA_H-elongata_contig79607.15614.1 vs. uniprot
Match: K3X6S0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6S0_GLOUD)

HSP 1 Score: 63.9 bits (154), Expect = 3.460e-7
Identity = 50/157 (31.85%), Postives = 75/157 (47.77%), Query Frame = 0
Query:  136 PITIELRETPTIMVLEIRGSAVATDLRDFGRYQQEKKDYEKRVQEWSVSDRTASRHTQTVNWALKAKEVTAAAASTKDASCAATAWEIFDEYSKKTDQ---GAADDGVYGSAGSKIEVSGE------------DTAMQRQANELATVTLASEGCLLE 277
            P+TIEL ETPT+ + E+R   V+ D        Q  + Y +   +   SD+     +QT+  A K KEV  A  +T+DA C AT W+IFD Y  + +    G  D     SA +    +G+            D  ++ Q +E+   TL S GC+L+
Sbjct:  257 PVTIELAETPTMFLFELRSVCVSQDASYHQTVAQRNRQYLEICAQKKGSDKFIEGRSQTLQLAQKGKEVMTAPPATRDAMCVATDWDIFDWYDNQNEHDENGGMDAVPTVSAAAASASNGKTRTSTADSYETGDLQLKHQVDEIVDATLVSPGCVLD 413          
BLAST of mRNA_H-elongata_contig79607.15614.1 vs. uniprot
Match: A0A8K1FCA0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCA0_PYTOL)

HSP 1 Score: 59.3 bits (142), Expect = 9.850e-6
Identity = 49/163 (30.06%), Postives = 74/163 (45.40%), Query Frame = 0
Query:  124 DATGLTEEYLNAPITIELRETPTIMVLEIRGSAVATDLRDFGRYQQEKKDYEKRVQEWSVSDRTASRHTQTVNWALKAKEVTAAAASTKDASCAATAWEIFD-------EYSKKTDQGAADDGVYGSAGSKI--EVSGEDTAMQRQANELATVTLASEGCLLE 277
            + T  TE      +TIEL ET T M+ E++   VA D           K Y +       SD+     +QT+  A K+KEV  A  +T+D++C AT W+IFD         +   D  A D         K   E    +  +++Q +E+   T+AS GC+L+
Sbjct:  219 EVTLKTERKARRLVTIELTETSTEMLFELKSVCVAQDATYHQAITARNKQYLEMCAGKKGSDKFVEGRSQTLQLAQKSKEVMTAPPATRDSACTATDWDIFDCTRIDDENANDHEDNNAIDASSVAQGKPKAPGEAENGEVVLKQQVHEIVDATMASPGCVLD 381          
BLAST of mRNA_H-elongata_contig79607.15614.1 vs. uniprot
Match: A0A2D4BZ14_PYTIN (Axonemal Inner Arm I1 Intermediate Chain Dynein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZ14_PYTIN)

HSP 1 Score: 58.5 bits (140), Expect = 1.320e-5
Identity = 49/152 (32.24%), Postives = 76/152 (50.00%), Query Frame = 0
Query:  136 PITIELRETPTIMVLEIRGSAVATDLRDFGRYQQEKKDYEKRVQEWSVSDRTASRHTQTVNWALKAKEVTAAAASTKDASCAATAWEIFDEYSKKTDQGAADD-----GVYGSAGSKIEVSGED-----TAMQRQANELATVTLASEGCLLE 277
            PITI+L ET T M+ E+R   VA D           K Y +       SD+     +QT+  A K KEV  A  +T+D++C AT W+IFD    + D  +A+D     G+  +  ++ +  G D       +++Q  E+   T+AS GC+L+
Sbjct:  210 PITIQLVETATEMLFELRSLCVAQDATYHQAIAMRNKQYVEMCAAKKGSDKFVEGRSQTLQLAQKTKEVMTAPPATRDSACMATDWDIFD--CARIDDDSANDHDDAGGMDAADKARDKAPGADGENGEAVLKQQVVEIVDATMASAGCVLD 359          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79607.15614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LS59_ECTSI1.230e-10961.20Dynein intermediate chain family n=1 Tax=Ectocarpu... [more]
A0A835YZL2_9STRA2.520e-2646.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1CCT2_9STRA5.750e-1630.90Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
T0R719_SAPDV4.640e-935.10Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A067CXT8_SAPPC9.440e-937.09Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A5D6Y6X3_9STRA8.400e-831.95Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3X6S0_GLOUD3.460e-731.85Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1FCA0_PYTOL9.850e-630.06Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BZ14_PYTIN1.320e-532.24Axonemal Inner Arm I1 Intermediate Chain Dynein n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79607contigH-elongata_contig79607:550..2785 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79607.15614.1mRNA_H-elongata_contig79607.15614.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig79607 550..2785 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig79607.15614.1 ID=prot_H-elongata_contig79607.15614.1|Name=mRNA_H-elongata_contig79607.15614.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=411bp
SSSRIGISRVGFSRSRVGVSVGASGQGSAGYGGMRVFHDGVNVTPQSLLT
STMVDKPGKRGMKAPGDAPVKRPSAGGGVAPRKKSSLSQSTGALQSAAIT
AGRAGGNAGGTRSPSRRKREGPADATGLTEEYLNAPITIELRETPTIMVL
EIRGSAVATDLRDFGRYQQEKKDYEKRVQEWSVSDRTASRHTQTVNWALK
AKEVTAAAASTKDASCAATAWEIFDEYSKKTDQGAADDGVYGSAGSKIEV
SGEDTAMQRQANELATVTLASEGCLLETANTVAPPPLPQEATAEANRSGG
TAGVSTNVVNPNINRVQGIIGTGVVGDGGQGGSGRKGNNATPTRKSSQSS
LGAAGTATEGRGSRLNTDGVDLAEEEAESPMDVRGVAEVLAAQQVKKIMA
SEQLLCSLELV
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