mRNA_H-elongata_contig79575.15610.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig79575.15610.1 vs. uniprot
Match: A0A6H5JK39_9PHAE (Cyclin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK39_9PHAE) HSP 1 Score: 129 bits (325), Expect = 1.240e-33 Identity = 73/96 (76.04%), Postives = 78/96 (81.25%), Query Frame = -1
Query: 1 TTSLAPTATGAVSSKPATSAGPSASSRPIRTATRTPTDIDQRDADEPLAVTEYVEDLYKFLREREITTQVDRRYMDDQPNVNERMRAILIDWLVEV 288
T + AP A A+SS PA SRPIRTA+RTPTDIDQRDADEPLAVTEYVEDLY FLREREI T+VDR YMD QPNVNERMR+ILIDWLVEV
Sbjct: 116 TQTTAPAAPAAISSAPA--------SRPIRTASRTPTDIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEV 203
BLAST of mRNA_H-elongata_contig79575.15610.1 vs. uniprot
Match: A0A6V2LUR7_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2LUR7_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.210e-14 Identity = 36/58 (62.07%), Postives = 47/58 (81.03%), Query Frame = -1
Query: 1 IDQRDADEPLAVTEYVEDLYKFLREREITTQVDRRYMDDQPNVNERMRAILIDWLVEV 174
ID+RD D+PL VT+YV+D+Y+ REREI T V YM+ Q ++NERMR+IL+DWLVEV
Sbjct: 112 IDERDRDDPLCVTDYVQDMYEHFREREIHTSVRPIYMEGQQHINERMRSILVDWLVEV 169
BLAST of mRNA_H-elongata_contig79575.15610.1 vs. uniprot
Match: B8BZ02_THAPS (Cyclin N-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZ02_THAPS) HSP 1 Score: 76.3 bits (186), Expect = 2.820e-14 Identity = 35/61 (57.38%), Postives = 47/61 (77.05%), Query Frame = -1
Query: 1 PTDIDQRDADEPLAVTEYVEDLYKFLREREITTQVDRRYMDDQPNVNERMRAILIDWLVEV 183
P DID+RD+D+PL T YV+D+Y+ R +E+ T V YM+DQ +NERMR+IL+DWLVEV
Sbjct: 15 PDDIDERDSDDPLCATSYVQDMYEHFRGKEVFTSVRPVYMEDQQFINERMRSILVDWLVEV 75
BLAST of mRNA_H-elongata_contig79575.15610.1 vs. uniprot
Match: A0A7C9AAL2_OPUST (Cyclin N-terminal domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9AAL2_OPUST) HSP 1 Score: 73.9 bits (180), Expect = 3.590e-14 Identity = 37/59 (62.71%), Postives = 45/59 (76.27%), Query Frame = -1
Query: 1 DIDQRDADEPLAVTEYVEDLYKFLREREITTQVDRRYMDDQPNVNERMRAILIDWLVEV 177
DID RDA PLAVTEYV+DLY + R E+++ V YM Q ++NE+MRAILIDWLVEV
Sbjct: 110 DIDGRDAKNPLAVTEYVDDLYSYYRRMEVSSCVPPDYMSQQFDINEKMRAILIDWLVEV 168
BLAST of mRNA_H-elongata_contig79575.15610.1 vs. uniprot
Match: J3KZK6_ORYBR (Cyclin N-terminal domain-containing protein n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3KZK6_ORYBR) HSP 1 Score: 74.3 bits (181), Expect = 6.280e-14 Identity = 36/59 (61.02%), Postives = 44/59 (74.58%), Query Frame = -1
Query: 1 DIDQRDADEPLAVTEYVEDLYKFLREREITTQVDRRYMDDQPNVNERMRAILIDWLVEV 177
DID D+ PLA TEYVE++YKF RE E T+ V YM Q ++NE+MRAILIDWL+EV
Sbjct: 96 DIDSADSGNPLAATEYVEEMYKFYRENEETSCVQPDYMSSQEDINEKMRAILIDWLIEV 154
BLAST of mRNA_H-elongata_contig79575.15610.1 vs. uniprot
Match: A0A7S3Q0F9_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0F9_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.030e-13 Identity = 36/64 (56.25%), Postives = 49/64 (76.56%), Query Frame = -1
Query: 1 TRTPTDIDQRDADEPLAVTEYVEDLYKFLREREITTQVDRRYMDDQPNVNERMRAILIDWLVEV 192
T T DID+RD ++PL VT YV+D+Y+ ++E +T V YM+DQ N+NERMR+IL+DWLVEV
Sbjct: 94 TGTVDDIDERDKNDPLCVTSYVQDMYEHFADKEQSTSVRPVYMEDQSNINERMRSILVDWLVEV 157
BLAST of mRNA_H-elongata_contig79575.15610.1 vs. uniprot
Match: A0A7S0GK98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GK98_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.040e-13 Identity = 34/58 (58.62%), Postives = 47/58 (81.03%), Query Frame = -1
Query: 1 IDQRDADEPLAVTEYVEDLYKFLREREITTQVDRRYMDDQPNVNERMRAILIDWLVEV 174
ID+RD+D+PL VTEYV ++Y+ R +E +T V YM++Q +VNERMR+IL+DWLVEV
Sbjct: 108 IDERDSDDPLCVTEYVSEMYQHFRSKERSTSVRPVYMENQRHVNERMRSILVDWLVEV 165
BLAST of mRNA_H-elongata_contig79575.15610.1 vs. uniprot
Match: A0A7S2E2X1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E2X1_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.290e-13 Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = -1
Query: 1 DIDQRDADEPLAVTEYVEDLYKFLREREITTQVDRRYMDDQPNVNERMRAILIDWLVEV 177
DID RD + PL VTEYV ++Y+ LR +E+ V+ YM+ QP++NE+MRAILIDWL+EV
Sbjct: 163 DIDARDVNNPLMVTEYVVEIYQHLRSKELQMSVNPTYMERQPHINEKMRAILIDWLIEV 221
BLAST of mRNA_H-elongata_contig79575.15610.1 vs. uniprot
Match: A0A2K3NK41_TRIPR (B-like cyclin (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3NK41_TRIPR) HSP 1 Score: 75.1 bits (183), Expect = 1.350e-13 Identity = 39/59 (66.10%), Postives = 44/59 (74.58%), Query Frame = -1
Query: 1 DIDQRDADEPLAVTEYVEDLYKFLREREITTQVDRRYMDDQPNVNERMRAILIDWLVEV 177
DID DAD PLAVTEY+EDLY F R+ E T V YM Q ++NERMRAILIDWL+EV
Sbjct: 81 DIDTCDADNPLAVTEYIEDLYSFYRKVESTGCVSPNYMAQQFDINERMRAILIDWLIEV 139
BLAST of mRNA_H-elongata_contig79575.15610.1 vs. uniprot
Match: A0A7S4AAP4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AAP4_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.550e-13 Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = -1
Query: 1 IDQRDADEPLAVTEYVEDLYKFLREREITTQVDRRYMDDQPNVNERMRAILIDWLVEV 174
ID+RDA++PL TEYV+D+Y RE+E T V YM++Q ++NERMR+IL+DWLVEV
Sbjct: 120 IDERDAEDPLCATEYVQDMYDHFREKEAITSVRPLYMENQTHINERMRSILVDWLVEV 177 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79575.15610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig79575.15610.1 >prot_H-elongata_contig79575.15610.1 ID=prot_H-elongata_contig79575.15610.1|Name=mRNA_H-elongata_contig79575.15610.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp HLHQPVDQNRAHSLVNVRLVVHVSPVHLSRNFSFPKKLVQILNVLRHCQRback to top mRNA from alignment at H-elongata_contig79575:1531..1874+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig79575.15610.1 ID=mRNA_H-elongata_contig79575.15610.1|Name=mRNA_H-elongata_contig79575.15610.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=344bp|location=Sequence derived from alignment at H-elongata_contig79575:1531..1874+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig79575:1531..1874+ >mRNA_H-elongata_contig79575.15610.1 ID=mRNA_H-elongata_contig79575.15610.1|Name=mRNA_H-elongata_contig79575.15610.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=684bp|location=Sequence derived from alignment at H-elongata_contig79575:1531..1874+ (Himanthalia elongata Himel1 dioecious)back to top |