prot_H-elongata_contig7950.15605.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7950.15605.1
Unique Nameprot_H-elongata_contig7950.15605.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length184
Homology
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BLAST of mRNA_H-elongata_contig7950.15605.1 vs. uniprot
Match: D8LBS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS1_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.150e-18
Identity = 66/181 (36.46%), Postives = 76/181 (41.99%), Query Frame = 0 
Query:    3 SKREIALLHERRAAQLIEEGCSGFDEAQEHLDNALSIWSGYKQSDLMARTWCLKGCCSGKAGDYAKASASFKRAQHLAERADDAMLAVTAMINRAICEIQIGDAKGAATSSRRAFVKAQTEGGSQMTFLAHVIRAVSYQMAGNFLAACNEHEAAAMLAAVADNFNPEPRLALAMDINQGIR 183
            S REIA LH+  AA  +  G   F++AQEHLD+AL  W+GY +  L AR WCLK  CSG+AGD                                                                     IRA+SYQM GNFLAACNEHEAAA LA         P  AL M+ N GIR
Sbjct:   28 SGREIAHLHQSWAAAFLARG--SFNKAQEHLDHALEAWTGYDEPGLQARAWCLKASCSGEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRAMSYQMTGNFLAACNEHEAAAKLAEQRQVHPLAPAFALGMETNFGIR 206
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7950.15605.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBS1_ECTSI1.150e-1836.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 10..161
e-value: 6.2E-12
score: 47.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 26..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7950contigH-elongata_contig7950:3982..5369 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7950.15605.1mRNA_H-elongata_contig7950.15605.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7950 3982..5369 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7950.15605.1 ID=prot_H-elongata_contig7950.15605.1|Name=mRNA_H-elongata_contig7950.15605.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=184bp
MASKREIALLHERRAAQLIEEGCSGFDEAQEHLDNALSIWSGYKQSDLMA
RTWCLKGCCSGKAGDYAKASASFKRAQHLAERADDAMLAVTAMINRAICE
IQIGDAKGAATSSRRAFVKAQTEGGSQMTFLAHVIRAVSYQMAGNFLAAC
NEHEAAAMLAAVADNFNPEPRLALAMDINQGIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf