mRNA_H-elongata_contig79357.15593.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig79357.15593.1 vs. uniprot
Match: D8LB49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB49_ECTSI) HSP 1 Score: 205 bits (521), Expect = 3.490e-58 Identity = 112/152 (73.68%), Postives = 126/152 (82.89%), Query Frame = 1
Query: 16 KVEEAAQKANAHDFVSSFPDGYDTEVGDKGVQLSGGQKQRIAIARAILKAISVRGLWCRQDPAILLLDEATSALDMESERLVQAALDKLVADGRRGRTTIVIAHRLSTVRRG--ICVVQHGAVVEEGSHDQLLAKPDSRYKLLVDAAEGRGG 465
+VEEAA+KANAHDFV SFPDGYDTEVG+KGVQLSGGQKQRIAIARAILK DPAILLLDEATSALDM+SERLVQ AL++LV R RTTIVIAHRLST+R+ ICVV G + EEGSH++LLA+PDSRYK+L+DAAEG GG
Sbjct: 1235 EVEEAARKANAHDFVCSFPDGYDTEVGEKGVQLSGGQKQRIAIARAILK-----------DPAILLLDEATSALDMDSERLVQEALNQLV--DMRQRTTIVIAHRLSTIRKADKICVVHAGTIAEEGSHEELLARPDSRYKVLLDAAEGTGG 1373
BLAST of mRNA_H-elongata_contig79357.15593.1 vs. uniprot
Match: A0A7S0GIU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GIU4_9STRA) HSP 1 Score: 160 bits (404), Expect = 4.610e-46 Identity = 88/157 (56.05%), Postives = 112/157 (71.34%), Query Frame = 1
Query: 25 EAAQKANAHDFVSSFPDGYDTEVGDKGVQLSGGQKQRIAIARAILKAISVRGLWCRQDPAILLLDEATSALDMESERLVQAALDKLVADGRRGRTTIVIAHRLSTVRRGICVVQHGA------------VVEEGSHDQLLAKPDSRYKLLVDAAEGR 459
EAA+ ANAH+F+S+FP+GYDT VG +G +LSGGQKQR+AIARAIL+ +PAIL+LDEATSALD +SE++VQ ALDKLV D + RTTI+IAHRLSTVR +V G+ ++E+GSHD+L+AKP+ YK LV A E R
Sbjct: 108 EAAKSANAHEFISNFPEGYDTAVGVRGCKLSGGQKQRVAIARAILR-----------NPAILILDEATSALDNKSEKVVQQALDKLVEDNNKQRTTILIAHRLSTVRNADKIVVLGSPEGTSTASSGSQILEQGSHDELMAKPNGFYKALVGAGERR 253
BLAST of mRNA_H-elongata_contig79357.15593.1 vs. uniprot
Match: T0Q8Q1_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q8Q1_SAPDV) HSP 1 Score: 168 bits (426), Expect = 8.880e-46 Identity = 89/142 (62.68%), Postives = 111/142 (78.17%), Query Frame = 1
Query: 28 AAQKANAHDFVSSFPDGYDTEVGDKGVQLSGGQKQRIAIARAILKAISVRGLWCRQDPAILLLDEATSALDMESERLVQAALDKLVADGRRGRTTIVIAHRLSTVRRG--ICVVQHGAVVEEGSHDQLLAKPDSRYKLLVDA 447
AA++ANA+DF+ FPDG+DTEVGD+G QLSGGQKQRIAIARAI+K +P+IL+LDEATSALD ESE +VQA+LD+LVA G R TTI+IAHRLST+R I V+Q G +VE+G+HD+L+ +PD YK LVDA
Sbjct: 465 AAKQANAYDFIMGFPDGFDTEVGDRGAQLSGGQKQRIAIARAIIK-----------NPSILILDEATSALDTESEHIVQASLDRLVASGNR--TTIIIAHRLSTIRNADRIVVLQAGRIVEDGAHDELVERPDGLYKALVDA 593
BLAST of mRNA_H-elongata_contig79357.15593.1 vs. uniprot
Match: A0A1V9YY54_9STRA (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YY54_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.120e-45 Identity = 88/143 (61.54%), Postives = 105/143 (73.43%), Query Frame = 1
Query: 19 VEEAAQKANAHDFVSSFPDGYDTEVGDKGVQLSGGQKQRIAIARAILKAISVRGLWCRQDPAILLLDEATSALDMESERLVQAALDKLVADGRRGRTTIVIAHRLSTVRRG--ICVVQHGAVVEEGSHDQLLAKPDSRYKLLV 441
+E AA+ ANAH F+SSFPDGY T+VGD+G Q+SGGQKQRIAIARAI+K DPAILLLDEATSALD ESER+VQA+LD L+ +R RTTI++AHRLST+R I VV G VVE GSHD+L+ Y+ LV
Sbjct: 4 IETAAKNANAHAFISSFPDGYHTQVGDRGAQVSGGQKQRIAIARAIIK-----------DPAILLLDEATSALDTESERVVQASLDALLQ--QRKRTTIIVAHRLSTIRNVDVIAVVHDGKVVELGSHDELMLISGGFYQTLV 133
BLAST of mRNA_H-elongata_contig79357.15593.1 vs. uniprot
Match: A0A485KKS4_9STRA (Aste57867_8609 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KKS4_9STRA) HSP 1 Score: 169 bits (428), Expect = 1.140e-45 Identity = 91/144 (63.19%), Postives = 111/144 (77.08%), Query Frame = 1
Query: 16 KVEEAAQKANAHDFVSSFPDGYDTEVGDKGVQLSGGQKQRIAIARAILKAISVRGLWCRQDPAILLLDEATSALDMESERLVQAALDKLVADGRRGRTTIVIAHRLSTVRRG--ICVVQHGAVVEEGSHDQLLAKPDSRYKLLV 441
++EEAA+KANAHDF+ +FPDGY T+VGD+GVQ+SGGQKQRIAIARAIL+ DPA+LLLDEATSALD ESER+VQA+LD L+ + RTTIV+AHRLST+R I V G VVE+G+HDQL+ +PD YK LV
Sbjct: 1161 EIEEAAKKANAHDFIVNFPDGYATQVGDRGVQVSGGQKQRIAIARAILR-----------DPAVLLLDEATSALDNESERIVQASLDALLQ--LKKRTTIVVAHRLSTIRNADLIAVCHEGGVVEQGTHDQLMLRPDGLYKTLV 1291
BLAST of mRNA_H-elongata_contig79357.15593.1 vs. uniprot
Match: A0A7S2EFB5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EFB5_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.180e-45 Identity = 96/156 (61.54%), Postives = 113/156 (72.44%), Query Frame = 1
Query: 16 KVEEAAQKANAHDFVSSFPDGYDTEVGDKGVQLSGGQKQRIAIARAILKAISVRGLWCRQDPAILLLDEATSALDMESERLVQAALDKLVADGRRGRTTIVIAHRLSTVRRG--ICVVQHGAVVEEGSHDQLLAKPDSRYKLLVDAAEGRGGSIGA 477
++ +AA+ ANAHDF+SSFPDGYDT+VGDKG QLSGGQKQRIAIAR ++K +P ILLLDEATSALD ESE +VQ ALDKL+ G R TTIVIAHRLST+R I VV G VVE GSHD+L+A S+Y LVDA + R S G+
Sbjct: 529 QIVQAAKMANAHDFISSFPDGYDTQVGDKGAQLSGGQKQRIAIARVLVK-----------NPKILLLDEATSALDSESELVVQEALDKLLETGNR--TTIVIAHRLSTIRNVDMIAVVSDGKVVETGSHDELMAIRGSKYSQLVDAQKMRSSSSGS 671
BLAST of mRNA_H-elongata_contig79357.15593.1 vs. uniprot
Match: A0A7S1R8J0_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R8J0_ALECA) HSP 1 Score: 158 bits (400), Expect = 1.560e-45 Identity = 84/149 (56.38%), Postives = 111/149 (74.50%), Query Frame = 1
Query: 1 SIAARKVEEAAQKANAHDFVSSFPDGYDTEVGDKGVQLSGGQKQRIAIARAILKAISVRGLWCRQDPAILLLDEATSALDMESERLVQAALDKLVADGRRGRTTIVIAHRLSTVRRG--ICVVQHGAVVEEGSHDQLLAKPDSRYKLLV 441
+I + +V +AA+KANAH F+ PDGYDTEVG++GVQLSGGQKQRI+IARA+++ P +LLLDEATSALD ESE LVQ A+D L+A + T +++AHRLSTV+R ICVVQ G +VEEG+H++LL +PD +Y+ LV
Sbjct: 105 AIDSERVFDAAKKANAHAFILEMPDGYDTEVGERGVQLSGGQKQRISIARALVRR-----------PRVLLLDEATSALDAESEALVQQAVDNLIA--QHEMTVVIVAHRLSTVKRADRICVVQGGRIVEEGTHEELLRRPDGQYRRLV 240
BLAST of mRNA_H-elongata_contig79357.15593.1 vs. uniprot
Match: A0A418AFP6_9STRA (ABC transporter domain-containing protein (Fragment) n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A418AFP6_9STRA) HSP 1 Score: 155 bits (393), Expect = 2.350e-45 Identity = 87/144 (60.42%), Postives = 107/144 (74.31%), Query Frame = 1
Query: 16 KVEEAAQKANAHDFVSSFPDGYDTEVGDKGVQLSGGQKQRIAIARAILKAISVRGLWCRQDPAILLLDEATSALDMESERLVQAALDKLVADGRRGRTTIVIAHRLSTVRRG--ICVVQHGAVVEEGSHDQLLAKPDSRYKLLV 441
++EEAA+KANAHDF+ FPD Y+T VGD+GVQ+SGGQKQRIAIARAI++ DPAILLLDEATSALD ESER+VQ +LD+L+ RR TTI++AHRLSTVR I VV G V E+G+HD+L+ P+ Y LV
Sbjct: 45 EIEEAAKKANAHDFIMQFPDKYNTAVGDRGVQVSGGQKQRIAIARAIIR-----------DPAILLLDEATSALDNESERIVQDSLDQLLKLKRR--TTIIVAHRLSTVRNADVIAVVDGGRVAEQGTHDELIGIPNGIYANLV 175
BLAST of mRNA_H-elongata_contig79357.15593.1 vs. uniprot
Match: A0A662X669_9STRA (ABC transporter domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X669_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.380e-45 Identity = 86/145 (59.31%), Postives = 111/145 (76.55%), Query Frame = 1
Query: 16 KVEEAAQKANAHDFVSSFPDGYDTEVGDKGVQLSGGQKQRIAIARAILKAISVRGLWCRQDPAILLLDEATSALDMESERLVQAALDKLVADGRRGRTTIVIAHRLSTVRRG--ICVVQHGAVVEEGSHDQLLAKPDSRYKLLVD 444
+V EAA+ ANA+DF+S+FP G+DT+VGD+G Q+SGGQKQRIAIARAIL+ DP +LLLDEATSALD ESER+VQA+LD L+A + RTTIV+AHRLSTVR+ I V Q GA+VE+GSH++L+ P Y+ +V+
Sbjct: 59 QVVEAAKSANAYDFISNFPLGFDTDVGDRGAQVSGGQKQRIAIARAILR-----------DPDVLLLDEATSALDNESERVVQASLDTLLA--LKQRTTIVVAHRLSTVRKADVIAVTQDGAIVEQGSHEELMRVPGGIYRGMVE 190
BLAST of mRNA_H-elongata_contig79357.15593.1 vs. uniprot
Match: A0A7S1Z9M2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z9M2_9STRA) HSP 1 Score: 168 bits (425), Expect = 2.700e-45 Identity = 96/156 (61.54%), Postives = 113/156 (72.44%), Query Frame = 1
Query: 16 KVEEAAQKANAHDFVSSFPDGYDTEVGDKGVQLSGGQKQRIAIARAILKAISVRGLWCRQDPAILLLDEATSALDMESERLVQAALDKLVADGRRGRTTIVIAHRLSTVRRG--ICVVQHGAVVEEGSHDQLLAKPDSRYKLLVDAAEGRGGSIGA 477
++ +AA+ ANAHDF+SSFPDGYDT+VGDKG QLSGGQKQRIAIAR ++K +P ILLLDEATSALD ESE +VQ ALDKL+ G R TTIVIAHRLST+R I VV G VVE GSHD+L+A S+Y LVDA + R S G+
Sbjct: 529 QIVQAAKMANAHDFISSFPDGYDTQVGDKGAQLSGGQKQRIAIARVLVK-----------NPKILLLDEATSALDSESELVVQEALDKLLETGNR--TTIVIAHRLSTIRNVDMIAVVSDGKVVETGSHDELMAIRGSKYSQLVDAQKMRSSSSGS 671 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79357.15593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig79357.15593.1 >prot_H-elongata_contig79357.15593.1 ID=prot_H-elongata_contig79357.15593.1|Name=mRNA_H-elongata_contig79357.15593.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=160bp SIAARKVEEAAQKANAHDFVSSFPDGYDTEVGDKGVQLSGGQKQRIAIARback to top mRNA from alignment at H-elongata_contig79357:1580..2652- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig79357.15593.1 ID=mRNA_H-elongata_contig79357.15593.1|Name=mRNA_H-elongata_contig79357.15593.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1073bp|location=Sequence derived from alignment at H-elongata_contig79357:1580..2652- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig79357:1580..2652- >mRNA_H-elongata_contig79357.15593.1 ID=mRNA_H-elongata_contig79357.15593.1|Name=mRNA_H-elongata_contig79357.15593.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=960bp|location=Sequence derived from alignment at H-elongata_contig79357:1580..2652- (Himanthalia elongata Himel1 dioecious)back to top |