mRNA_H-elongata_contig79308.15590.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig79308.15590.1
Unique NamemRNA_H-elongata_contig79308.15590.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: A0A834FW95_RHOSS (Uncharacterized protein n=3 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FW95_RHOSS)

HSP 1 Score: 286 bits (732), Expect = 1.980e-90
Identity = 154/330 (46.67%), Postives = 217/330 (65.76%), Query Frame = 1
Query:   16 AFKLRTTQRAAAAAVGLSKTTFRRNMKALGVKAHARFLKPFLSDAQKIERLRWARGWTTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTIE-VTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQLE 1002
            AF  RT  R+ + A+ + K+T  + +K   ++ H   LKP LSD  KI RL +              MFK + N V++DEKWFYM K+ +RYYV   E  P R  + K  +TKVMFL AVARPR   +   +FSGK+GI+PFT +  A+R+S+NR+AGT+ TK +  VTK+  +  L+EKVIP I+S++ + S G +     +++QQDNARPH   ND E  +A + +G+DIRL NQPANS D N+LDLGFFN+IQSLQ +  PR++D+LV AV+++  + P   L+ V+LSLQAC+ ++M   G N+YKLPH++K +L   G LP+QLE
Sbjct:  102 AFHRRTNIRSFSEALEVPKSTLHQRIKEGEIRPHTNPLKPNLSDQNKIARLHFCLSMLEPNSLQTQPMFKAMYNYVHIDEKWFYMTKESERYYVLPDEDQPHRTCKSKRFITKVMFLAAVARPRFGANGCEEFSGKIGIFPFTVKEPAKRTSKNRLAGTMETKAVAAVTKDVIRSYLIEKVIPAIQSKWHQSSVGET-----IYIQQDNARPHIKPNDVEFHEAATRNGFDIRLTNQPANSPDLNVLDLGFFNAIQSLQHQEAPRTIDQLVNAVEKSFDKLPSRELDSVFLSLQACMVEVMKVNGGNNYKLPHIKKPQLRRDGVLPFQLE 426          
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: UPI001CB9A663 (uncharacterized protein LOC122597563 n=3 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9A663)

HSP 1 Score: 276 bits (707), Expect = 4.050e-87
Identity = 153/322 (47.52%), Postives = 207/322 (64.29%), Query Frame = 1
Query:   40 RAAAAAVGLSKTTFRRNMKALGVKAHARFLKPFLSDAQKIERLRWARGWTTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTI-EVTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQLE 1002
            R+ A A+ +SK+T  R +K   ++ H   +KP L+D  K  RL +     T      S  F  + NV+++DEKWFYM K  +RYY+   E  P R  + K  +TKVMFL AVARPR + S N  FSGK+GI+PFT    A+RSS+NRVAGTL+TK I  VTKE  +  L+EKV+P I+S++PR   G       +++QQDNA+PH   ND E  +  S DG+DIRL  QP NS D N+LDLGFF +IQSLQ++    S+DELV+AVK + +R P   LN V+L+LQ C+++IM   G N+Y+ PH+ KG+LE  G LP  +E
Sbjct:   81 RSIAKAIDVSKSTMHRRIKEGALRPHTNAIKPDLTDDNKKARLEFCLSTVT-----RSLTFHDIFNVIHIDEKWFYMSKPSKRYYLVPNEIEPLRTCKSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIFPFTTLEPAKRSSKNRVAGTLITKPILSVTKEVTRSWLIEKVLPAIRSKWPRDHTGP------IFIQQDNAKPHIDVNDAEFNQEASKDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLQEQEVLGSIDELVSAVKTSFERMPSNELNNVFLTLQTCMKEIMKVRGGNNYQTPHIGKGKLERQGKLPLTIE 391          
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3)

HSP 1 Score: 270 bits (691), Expect = 2.130e-84
Identity = 146/315 (46.35%), Postives = 204/315 (64.76%), Query Frame = 1
Query:   58 VGLSKTTFRRNMKALGVKAHARFLKPFLSDAQKIERLRWARGWTTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTI-EVTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQL 999
            + +SK+T  R +K   ++ H   +KP L+   K  RL +     +  ++     F  + NV+++DEKWFYM K  +RYY+  GE  P R  Q K  +TKVMFL AVARPR + S N  FSGK+GIYPFT+   A+RSS+NRVAGTL TK I  VTKE  +  L+EKV+PDI++++PR   G       +++QQDNA+PH   ND E  +A S DG+DIRL  QP+NS D N+LDLGFF +IQSLQ++    ++DELV AV+ A ++     LN V+L+LQ C+ +I+   G N+Y++PH+ K RLE  G LP ++
Sbjct:  110 LNVSKSTMHRRIKEGALRPHTNAIKPTLTHENKRARLEFCLSKISRSLSSNIPTFHDMFNVIHIDEKWFYMSKPSRRYYLVPGEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAKWPRSHVGP------IFIQQDNAKPHIDVNDNEFLEAASQDGFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIGKNRLEREGNLPLRI 418          
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1)

HSP 1 Score: 268 bits (684), Expect = 2.850e-84
Identity = 148/325 (45.54%), Postives = 209/325 (64.31%), Query Frame = 1
Query:   28 RTTQRAAAAAVGLSKTTFRRNMKALGVKAHARFLKPFLSDAQKIERLRWARGWTTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTIE-VTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQL 999
            R+T R+ A A+ +SKTT  R ++   ++ H   +KP L++  K  RL +      + +  ++ +F  + NVV++DEKWFYMCK   +YY+   E  P+R+V+ K  +TK MFL AVARPR      + FSGK+GI+PFT    A+R+S+NRVAGT+VTK  E +TKE  K  L+EKVIP I +++P+         R + +QQDNA+PH   N+ E  +A S DG+DIRL+ QP NS D N+LDLGFF SIQ LQ    P +++ELV AVK++    P   LN V+L+ Q C+++IM   G+NDYK+PH+ K RLE  G LP Q+
Sbjct:   36 RSTVRSLAKAISVSKTTVHRRVQEGLIRPHTNAVKPTLTEDNKRTRLEFC----LSQIDPDTLLFSDMFNVVHIDEKWFYMCKTTTKYYLVHDEPEPTRRVKSKRFITKAMFLAAVARPR------NGFSGKIGIFPFTFIEPAKRNSKNRVAGTMVTKVDESITKEKVKSCLIEKVIPAIHAKWPQ-------GMRTIIIQQDNAKPHIDCNNAEFMQAASKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREGTLPLQI 343          
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: UPI001CB8D7AC (uncharacterized protein LOC122583467 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8D7AC)

HSP 1 Score: 272 bits (695), Expect = 5.630e-83
Identity = 155/326 (47.55%), Postives = 206/326 (63.19%), Query Frame = 1
Query:   28 RTTQRAAAAAVGLSKTTFRRNMKALGVKAHARFLKPFLSDAQKIERLRWARGWTTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTI-EVTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQLE 1002
            RT  R+ A A+ +SK+T  R +K   ++ H   +KP L+D  K  RL +     T      S  F  + NV+++DEKWFYM K  +RYY+   E  P R  + K  +TKVMFL AVARPR + S N  FSGK+GI+PFT    A+RSS+NRVAGTL+TK I  VTKE  +  L EKV+P I+S++PR   G       +++QQDNA+PH   ND E  +  S DG+DIRL  QP NS D N+LDLGFF  IQSLQ++    S DELV+AVK + +R P   LN V+L+LQ C+++IM   G N+Y+ PH+ KG+LE  G LP  +E
Sbjct:  280 RTNIRSIAKAIDVSKSTMHRRIKEGALRPHTNAIKPDLTDDNKKARLEFCLSTVT-----RSLTFHDMFNVIHIDEKWFYMSKPSKRYYLVPNEIEPLRTCKSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIFPFTTLEPAKRSSKNRVAGTLITKPILSVTKEVTRSWLNEKVLPAIRSKWPRDHTGP------IFIQQDNAKPHIDVNDAEFNEEASKDGFDIRLCFQPPNSPDLNVLDLGFFRVIQSLQEQEVLGSNDELVSAVKTSFERMPSNELNNVFLTLQTCMKEIMKVRGGNNYQTPHIGKGKLERQGKLPLTIE 594          
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: UPI000B8F2756 (uncharacterized protein LOC110913170 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8F2756)

HSP 1 Score: 265 bits (677), Expect = 2.470e-82
Identity = 150/334 (44.91%), Postives = 212/334 (63.47%), Query Frame = 1
Query:    4 MANTAFKLRTTQRAAAAAVGLSKTTFRRNMKALGVKAHARFLKPFLSDAQKIERLRWARGWTTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTI-EVTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQLE 1002
            +A  A + RT  R+ A A+ +SK+T  R +K   ++ H   +KP L++  K ERL +     T  ++  S  F  + NVV++DEKWFYM K  + YY+  GE  P RK + K  +TKVMFL AVARPR +   N  FSGK+GI+PFT+   A+RSS+NRVAGT+ TK I  VTKE  +  L++KV+P I+ ++P+   G       +++QQDNA+PH   +D +  +  S  G+DIRL  QP NS D N+LDLGFF +IQSLQ++    S+DELV AV+ +  +     LN V+L+LQ C+++IM   G N+Y+ PH+ KGRLE  G LP Q+E
Sbjct:   91 VAQIALRRRTNIRSIAKALNVSKSTVHRRIKEGELRPHTNAIKPNLTEENKKERLEFCLSMITPSLSNPS--FYDMFNVVHIDEKWFYMSKPSKSYYLVPGEDEPLRKCKSKKFITKVMFLAAVARPRFDTLGNEIFSGKIGIFPFTKLEPAKRSSKNRVAGTMETKPILSVTKEVTRSWLIDKVLPAIRDKWPQGHTGP------IFIQQDNAKPHISIDDEQFVQEASRGGFDIRLRFQPPNSPDLNVLDLGFFRAIQSLQEQEVLGSIDELVHAVQTSFHKMSSRELNNVFLTLQTCMKEIMKVHGSNNYQTPHISKGRLERQGRLPLQIE 416          
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: A0A1R3KIH7_9ROSI (Transposase, Tc1-like protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3KIH7_9ROSI)

HSP 1 Score: 264 bits (675), Expect = 5.830e-82
Identity = 139/312 (44.55%), Postives = 203/312 (65.06%), Query Frame = 1
Query:   70 KTTFRRNMKALGVKAHARFLKPFLSDAQKIERLRWARGWTTTPVAGESRM-FKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTIEVTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQLE 1002
            K+T  R +K   ++AH+  +KP L+D  K  RL +         AG + + F G+ N V++DEKWF+M ++ +RYY+   E  P R  + K  +TKVMFL AVARPR + S N  FSGK+GI+PF  +  A+R S+NR+AGT+ TK + VTK+  +  ++EK++P IKS++P        +   V++QQDNA+PH    D E  KA S+DG+DI++  QP NS D N+LDLGFF +IQSLQ +  PR++DEL+ AV+++    P   LN V+L+LQ C+ ++M  GG N+YK+PH+ K +L+N G LP  LE
Sbjct:  119 KSTIHRRVKEGFIRAHSNAVKPDLTDENKKTRLEFCLSKLDLTNAGINTIPFDGMFNQVHIDEKWFFMTRESERYYLLPEEDEPVRTCKSKRFITKVMFLAAVARPRFDESGNVKFSGKIGIFPFVHKEPAKRKSKNRIAGTMETKPMLVTKDVTRAYMIEKILPAIKSKWPD-------KMETVYIQQDNAKPHINPKDVEFLKAASSDGFDIQISCQPPNSPDLNVLDLGFFRAIQSLQHQEAPRTIDELINAVEKSFNEFPENSLNNVFLTLQNCMIEVMKVGGGNNYKVPHMGKDKLQNQGNLPTTLE 423          
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: UPI001C25E3EC (uncharacterized protein LOC121760632 n=15 Tax=Salvia splendens TaxID=180675 RepID=UPI001C25E3EC)

HSP 1 Score: 263 bits (672), Expect = 4.450e-81
Identity = 139/326 (42.64%), Postives = 204/326 (62.58%), Query Frame = 1
Query:   28 RTTQRAAAAAVGLSKTTFRRNMKALGVKAHARFLKPFLSDAQKIERLRWARGWTTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTIE-VTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQLE 1002
            R+T R  A+ + +SKTT  R +K   +K H   +KP L++  KI R++W        +A    ++  + N+V++DEKWFYM K   RYY+   E  P R  + K  +TKVMF+ AV+RP C    +  F GK+G++PFT+Q+ AQRSS+NR  GT+ TK I+ +TKE     L+ ++IP IK+++P   A AS   +K+++QQDNA+PH    D +     S DG++  L++QP NS DTN+LDLG+F +IQSLQD     SVD+L+  V  + +   P  LN V+++LQ+CL  I+   G+NDYK+PH+ K RLE    LP QL+
Sbjct:  119 RSTIRKVASKMEVSKTTIGRFLKRNQLKPHTSAIKPTLTETNKIARIKWCLSHIQPTLAEGKLLYHSMHNIVHIDEKWFYMTKTSDRYYLLPDEDVPYRSCKSKRFITKVMFMAAVSRPLCGPDGDIIFDGKIGLFPFTEQIPAQRSSKNRPKGTMETKPIQSITKEVMTACLINQIIPSIKAKWP---ANAS---KKIFIQQDNAKPHLRAADHQFEALASTDGFEFHLISQPPNSPDTNVLDLGYFRAIQSLQDDKMATSVDDLLRNVFNSFEELSPQTLNRVFITLQSCLTAILQVHGKNDYKIPHMNKNRLERTEGLPLQLQ 438          
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: UPI001CB94040 (uncharacterized protein LOC122597462 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB94040)

HSP 1 Score: 258 bits (658), Expect = 5.670e-81
Identity = 143/307 (46.58%), Postives = 195/307 (63.52%), Query Frame = 1
Query:   85 RNMKALGVKAHARFLKPFLSDAQKIERLRWARGWTTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTI-EVTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQLE 1002
            R +K   ++ H   +KP L+D  K  RL +     T     +S  F  + NV+++DEKWFYM K  + YY+   E  P R  + K  +TKVMFL AVARPR + S N  FSGK+GI+PFT    A+R S+NRVAGTL+TK I  VTKE  +  L+EKV+P I+S++PR   G       +++QQ+NA+PH   ND E  +  S DG+DIRL  QP NS D N+LDLGFF +IQSL+ +    S+DELV+AVK + +R P   LN V+L+LQ C+++IM   G N+Y+ PH+ KG+LE  G LP  +E
Sbjct:    3 RRIKEGALRPHTNAIKPDLTDDNKKARLEFCLSTVT-----QSLTFHDMFNVIHIDEKWFYMSKPSKCYYLVPNEIEPLRTCKLKKFITKVMFLAAVARPRFDASGNEVFSGKIGIFPFTTLEPAKRLSKNRVAGTLITKPILSVTKEVTRSWLIEKVLPAIRSKWPRDHTGP------IFIQQENAKPHIDVNDAEFNQEASKDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLKKQEVLGSIDELVSAVKTSFERMPSNELNNVFLTLQTCMKEIMKVRGGNNYQTPHIGKGKLERQGKLPLTIE 298          
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: A0A452XZT7_AEGTS (Uncharacterized protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452XZT7_AEGTS)

HSP 1 Score: 259 bits (661), Expect = 7.770e-81
Identity = 142/327 (43.43%), Postives = 205/327 (62.69%), Query Frame = 1
Query:   28 RTTQRAAAAAVGLSKTTFRRNMKALGVKAHARFLKPFLSDAQKIERLRWARGW---TTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTIEVTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQL 999
            R+T R+ A  +  S TT  R      +K H   LKP L +  K +R+++       TTT    E   FK + N++++D+KWFYM K K+ YY+  GE  P+R +Q+ S + KVMFL AVARPR ++  N  FSGK+GI+PF ++V AQR S NR  GTL TK+I+V ++  ++ ++E ++P I++ +P   AG +     +++QQDNA+PH + NDPE   A+   G DIRL+ QP NS D N L+LGFFNS+QSL D  +PR++ +L+  V +  +      LN V+LSLQAC+ +I+   G N YK+PH  K RLEN G LP +L
Sbjct:   19 RSTIRSLAWQLQCSPTTLHRKFMLKLIKRHTNSLKPVLEEKNKKDRMKYCLSMLHETTTQT--ERPKFKTMHNIIHIDKKWFYMTKKKRNYYLLYGEEEPTRTLQNGSCIGKVMFLTAVARPRWDNEGNVTFSGKIGIWPFVKEVSAQRRSDNRPRGTLETKSIKVNRQVMREFMIENLLPAIQASWPENDAGQT-----IYIQQDNAKPHILPNDPEFVAAVERTGLDIRLIQQPVNSPDLNGLELGFFNSLQSLTDCLSPRTLQDLIKGVLDEFENYEVYKLNRVFLSLQACMIEILNHAGGNGYKIPHANKERLENLGMLPPRL 338          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A834FW95_RHOSS1.980e-9046.67Uncharacterized protein n=3 Tax=Rhododendron simsi... [more]
UPI001CB9A6634.050e-8747.52uncharacterized protein LOC122597563 n=3 Tax=Erige... [more]
UPI000CD873B32.130e-8446.35uncharacterized protein LOC111883545 n=1 Tax=Lactu... [more]
UPI0007F012D12.850e-8445.54uncharacterized protein LOC108203813 n=1 Tax=Daucu... [more]
UPI001CB8D7AC5.630e-8347.55uncharacterized protein LOC122583467 n=1 Tax=Erige... [more]
UPI000B8F27562.470e-8244.91uncharacterized protein LOC110913170 n=1 Tax=Helia... [more]
A0A1R3KIH7_9ROSI5.830e-8244.55Transposase, Tc1-like protein n=1 Tax=Corchorus ol... [more]
UPI001C25E3EC4.450e-8142.64uncharacterized protein LOC121760632 n=15 Tax=Salv... [more]
UPI001CB940405.670e-8146.58uncharacterized protein LOC122597462 n=1 Tax=Erige... [more]
A0A452XZT7_AEGTS7.770e-8143.43Uncharacterized protein n=2 Tax=Aegilops tauschii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79308contigH-elongata_contig79308:720..1721 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score226.5
Seed ortholog evalue1.6e-56
Seed eggNOG ortholog161934.XP_010672225.1
EggNOG OGs2CMKC@1,2QQNW@2759,37TMG@33090,3GG9M@35493
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Exons1
Model size1002
Cds size843
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79308.15590.1prot_H-elongata_contig79308.15590.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig79308 723..1565 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931198.05593-UTR-H-elongata_contig79308:719..7221622931198.05593-UTR-H-elongata_contig79308:719..722Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig79308 720..722 +
1691679737.809936-UTR-H-elongata_contig79308:719..7221691679737.809936-UTR-H-elongata_contig79308:719..722Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig79308 720..722 +
1622931198.0943384-UTR-H-elongata_contig79308:1565..17211622931198.0943384-UTR-H-elongata_contig79308:1565..1721Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig79308 1566..1721 +
1691679737.8338516-UTR-H-elongata_contig79308:1565..17211691679737.8338516-UTR-H-elongata_contig79308:1565..1721Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig79308 1566..1721 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931198.0778763-CDS-H-elongata_contig79308:722..15651622931198.0778763-CDS-H-elongata_contig79308:722..1565Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79308 723..1565 +
1691679737.824832-CDS-H-elongata_contig79308:722..15651691679737.824832-CDS-H-elongata_contig79308:722..1565Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79308 723..1565 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig79308.15590.1

>prot_H-elongata_contig79308.15590.1 ID=prot_H-elongata_contig79308.15590.1|Name=mRNA_H-elongata_contig79308.15590.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=281bp
MANTAFKLRTTQRAAAAAVGLSKTTFRRNMKALGVKAHARFLKPFLSDAQ
KIERLRWARGWTTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFE
GEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQV
RAQRSSRNRVAGTLVTKTIEVTKESYKKMLLEKVIPDIKSQFPRPSAGAS
PEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNIL
DLGFFNSIQSLQDRTTPRSVDELVTAVKEA*
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mRNA from alignment at H-elongata_contig79308:720..1721+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig79308.15590.1 ID=mRNA_H-elongata_contig79308.15590.1|Name=mRNA_H-elongata_contig79308.15590.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1002bp|location=Sequence derived from alignment at H-elongata_contig79308:720..1721+ (Himanthalia elongata Himel1 dioecious)
GCCATGGCCAACACCGCGTTCAAGCTGCGCACAACACAACGAGCCGCAGC TGCAGCGGTCGGCCTTTCGAAGACAACATTTCGAAGGAACATGAAAGCGC TTGGGGTGAAGGCGCACGCGCGTTTCTTGAAGCCGTTTCTCTCTGACGCC CAGAAGATAGAGCGGCTGAGGTGGGCGAGAGGCTGGACTACAACGCCGGT GGCAGGGGAGTCTCGCATGTTCAAGGGGGTGGGAAACGTGGTGTATGTAG ATGAGAAATGGTTCTACATGTGCAAAGACAAGCAGAGATACTACGTGTTC GAGGGCGAGCACCCACCGAGTCGGAAGGTTCAACACAAGAGCCACGTGAC GAAAGTGATGTTTCTCGGCGCTGTGGCGCGGCCAAGGTGCAATCATTCGA CCAACTCGGATTTCAGCGGGAAGGTTGGGATCTACCCCTTCACGCAGCAA GTGAGAGCCCAGCGAAGCAGCCGGAACAGGGTTGCAGGCACATTGGTGAC AAAAACGATTGAGGTCACTAAGGAGAGCTACAAGAAGATGCTCCTAGAAA AGGTCATCCCCGACATCAAGAGCCAGTTTCCTCGCCCTTCGGCCGGTGCC AGTCCCGAGGCTAGGAAAGTTTGGGTACAGCAGGACAACGCGCGTCCCCA CTTCGTCAACAACGACCCAGAGATTAGGAAGGCCATATCTGCAGACGGGT GGGACATCCGGCTGGTCAACCAGCCAGCCAACAGCTCGGACACAAACATT TTGGATTTGGGTTTCTTCAACTCAATCCAGTCCCTGCAGGACCGCACGAC CCCTAGGTCCGTGGATGAGTTGGTCACCGCAGTGAAGGAGGCCTGAAAAC GGGACCCTCCAGCCGTGCTCAACCTGGTGTGGCTCAGCCTGCAGGCCTGC CTGGAGCAGATAATGCTTGCTGGAGGGGAGAATGACTACAAGCTGCCCCA TGTTCGCAAGGGCAGGCTCGAGAACGCCGGTGCTCTGCCGTGGCAGTTGG AG
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Coding sequence (CDS) from alignment at H-elongata_contig79308:720..1721+

>mRNA_H-elongata_contig79308.15590.1 ID=mRNA_H-elongata_contig79308.15590.1|Name=mRNA_H-elongata_contig79308.15590.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1686bp|location=Sequence derived from alignment at H-elongata_contig79308:720..1721+ (Himanthalia elongata Himel1 dioecious)
ATGGCCAACACCGCGTTCAAGCTGCGCACAACACAACGAGCCGCAGCTGC
AGCGGTCGGCCTTTCGAAGACAACATTTCGAAGGAACATGAAAGCGCTTG
GGGTGAAGGCGCACGCGCGTTTCTTGAAGCCGTTTCTCTCTGACGCCCAG
AAGATAGAGCGGCTGAGGTGGGCGAGAGGCTGGACTACAACGCCGGTGGC
AGGGGAGTCTCGCATGTTCAAGGGGGTGGGAAACGTGGTGTATGTAGATG
AGAAATGGTTCTACATGTGCAAAGACAAGCAGAGATACTACGTGTTCGAG
GGCGAGCACCCACCGAGTCGGAAGGTTCAACACAAGAGCCACGTGACGAA
AGTGATGTTTCTCGGCGCTGTGGCGCGGCCAAGGTGCAATCATTCGACCA
ACTCGGATTTCAGCGGGAAGGTTGGGATCTACCCCTTCACGCAGCAAGTG
AGAGCCCAGCGAAGCAGCCGGAACAGGGTTGCAGGCACATTGGTGACAAA
AACGATTGAGGTCACTAAGGAGAGCTACAAGAAGATGCTCCTAGAAAAGG
TCATCCCCGACATCAAGAGCCAGTTTCCTCGCCCTTCGGCCGGTGCCAGT
CCCGAGGCTAGGAAAGTTTGGGTACAGCAGGACAACGCGCGTCCCCACTT
CGTCAACAACGACCCAGAGATTAGGAAGGCCATATCTGCAGACGGGTGGG
ACATCCGGCTGGTCAACCAGCCAGCCAACAGCTCGGACACAAACATTTTG
GATTTGGGTTTCTTCAACTCAATCCAGTCCCTGCAGGACCGCACGACCCC
TAGGTCCGTGGATGAGTTGGTCACCGCAGTGAAGGAGGCCTGAATGGCCA
ACACCGCGTTCAAGCTGCGCACAACACAACGAGCCGCAGCTGCAGCGGTC
GGCCTTTCGAAGACAACATTTCGAAGGAACATGAAAGCGCTTGGGGTGAA
GGCGCACGCGCGTTTCTTGAAGCCGTTTCTCTCTGACGCCCAGAAGATAG
AGCGGCTGAGGTGGGCGAGAGGCTGGACTACAACGCCGGTGGCAGGGGAG
TCTCGCATGTTCAAGGGGGTGGGAAACGTGGTGTATGTAGATGAGAAATG
GTTCTACATGTGCAAAGACAAGCAGAGATACTACGTGTTCGAGGGCGAGC
ACCCACCGAGTCGGAAGGTTCAACACAAGAGCCACGTGACGAAAGTGATG
TTTCTCGGCGCTGTGGCGCGGCCAAGGTGCAATCATTCGACCAACTCGGA
TTTCAGCGGGAAGGTTGGGATCTACCCCTTCACGCAGCAAGTGAGAGCCC
AGCGAAGCAGCCGGAACAGGGTTGCAGGCACATTGGTGACAAAAACGATT
GAGGTCACTAAGGAGAGCTACAAGAAGATGCTCCTAGAAAAGGTCATCCC
CGACATCAAGAGCCAGTTTCCTCGCCCTTCGGCCGGTGCCAGTCCCGAGG
CTAGGAAAGTTTGGGTACAGCAGGACAACGCGCGTCCCCACTTCGTCAAC
AACGACCCAGAGATTAGGAAGGCCATATCTGCAGACGGGTGGGACATCCG
GCTGGTCAACCAGCCAGCCAACAGCTCGGACACAAACATTTTGGATTTGG
GTTTCTTCAACTCAATCCAGTCCCTGCAGGACCGCACGACCCCTAGGTCC
GTGGATGAGTTGGTCACCGCAGTGAAGGAGGCCTGA
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