prot_H-elongata_contig79216.15583.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig79216.15583.1
Unique Nameprot_H-elongata_contig79216.15583.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length198
Homology
BLAST of mRNA_H-elongata_contig79216.15583.1 vs. uniprot
Match: A0A6H5JYD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD3_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 4.340e-54
Identity = 104/211 (49.29%), Postives = 139/211 (65.88%), Query Frame = 0
Query:    1 MHALVVPGLGCNIFSPKANLRNGVKHVLEAGNPHLSVGDVVIPLVQDPQDQGLCSLNIGFQSD---------------PHDKMCSKCDNVLQDDATPGVAYVAETSPDIWDRRLGHMNIRNMNLLRRKEGIGVNYTGTVSNCDICAVTKSRQQAHPKTITRKTTKPMELVYMNLMGPTTPATKGGYKYVSQFTDDVSRMKEIFLLRSKMET 196
            +  LVVPGLG N+FS  A ++NGVK V+E GNPHL+VG   +PL QDP D G+CS++I FQ+                P D+   K D V+ DD   GVA  A  + + W R L H+N R+M LLR+KE  GV+++ +++ CDICA++KSRQ AHP+   R+TT PM+LVY + MG TTP  KGG+ YVS+FTD  S MKEI+LL++  ET
Sbjct:  203 LRGLVVPGLGRNVFSRAAQIKNGVKLVIEEGNPHLAVGGHTLPLKQDPLDMGMCSVDIEFQAASEQTTASTKPTSHALPDDRAIGKPDTVMLDDDL-GVACAATVNANTWHRWLRHLNFRSMELLRKKEDNGVDFSDSMTPCDICAISKSRQLAHPEKTNRETTAPMQLVYTDNMGKTTPLAKGGFGYVSKFTDAYSWMKEIYLLKAISET 412          
BLAST of mRNA_H-elongata_contig79216.15583.1 vs. uniprot
Match: A0A6H5JY69_9PHAE (Peptidase A2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY69_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 4.630e-44
Identity = 90/216 (41.67%), Postives = 124/216 (57.41%), Query Frame = 0
Query:    1 MHALVVPGLGCNIFSPKANLRNGVKHVLEAGNPHLSVGDVVIPLVQDPQDQGLCSLNIGFQSDPHDKMCSKCDN-------------VLQDDATPGV--AYVAETSPDIWDRRLGHMNIRNMNLLRRKEGIGVNYTGTVSNCDICAVTKSRQQAHPKTITRKTTKPMELVYMNLMGPTTPATKGG---YKYVSQFTDDVSRMKEIFLLRSKMETAE 198
            +  L+VPGLG NIF+P A L+ G++ VLE   PHL++G VV+PL Q+ QDQG+C+L I F+ DP     +  +N              +Q D TP    +     S D+W RRLGH+N R M +LRR    GV Y G VS CD C +TK ++   PK  +R  TKP +LV  + MGP  P  K     Y YV++  D  +RM+E++LLR + ET +
Sbjct:   86 LQGLIVPGLGRNIFAPTALLKKGLRSVLEDKTPHLTIGGVVVPLKQETQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFGKPEAVQIDRTPRATCSVAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCHITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKAIDIFTRMREVYLLRHRTETTQ 301          
BLAST of mRNA_H-elongata_contig79216.15583.1 vs. uniprot
Match: A0A6H5K9M6_9PHAE (gag_pre-integrs domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M6_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.100e-42
Identity = 82/211 (38.86%), Postives = 122/211 (57.82%), Query Frame = 0
Query:    1 MHALVVPGLGCNIFSPKANLRNGVKHVLEAGNPHLSVGDVVIPLVQDPQDQGLCSLNIGFQSD----------PHDKMCSKCDNVLQDDATPGVAYVAETSPDIWDRRLGHMNIRNMNLLRRKEGIGVNYTGTVSNCDICAVTKSRQQAHPKTITRKTTKPMELVYMNLMGPTTPATK---GGYKYVSQFTDDVSRMKEIFLLRSKMETAE 198
            +  L+VPGLG NIFSP + L+ G++ V+E   PHL +   VIPL QDP+DQG+C+L+I F+ +          PH K             T         S D W RRLGH+N R++++L +  G  V+Y  ++S C +C + K +Q  +PK  TR+ ++P +LV ++ MGP TP  K   G + Y  + TDD ++MKE++LLR K +T E
Sbjct:   56 IQGLIVPGLGRNIFSPTSLLKKGLRCVVEESTPHLPIQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQT--------HTANAVCFTLVSADTWHRRLGHLNARSLDILTKDTGTRVDYRDSLSPCGVCQIAKHKQSPYPKQSTRELSRPGQLVVIDNMGPVTPPAKYKGGSFAYACKITDDCTKMKEVYLLRKKSDTTE 258          
BLAST of mRNA_H-elongata_contig79216.15583.1 vs. uniprot
Match: A0A6H5K6T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6T1_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 4.070e-42
Identity = 91/217 (41.94%), Postives = 127/217 (58.53%), Query Frame = 0
Query:    1 MHALVVPGLGCNIFSPKANLRNGVKHVLEAGNPHLSVG-DVVIPLVQDPQDQGLCSLNIGFQSDPHDKMCSKCDN-------------VLQDDATPGV--AYVAETSPDIWDRRLGHMNIRNMNLLRRKEGIGVNYTGTVSNCDICAVTKSRQQAHPKTITRKTTKPMELVYMNLMGPTTPATKGG---YKYVSQFTDDVSRMKEIFLLRSKMETAE 198
            +  L+VPGLG NIF+P A L+ G++ VLE   PHL++G +VV+PL Q+ QDQG+C+L I F+ DP     +  +N              +Q D TP    +     S D+W RRLGH+N R M +LRR    GV Y G VS CD C +TK ++   PK  +R  TKP +LV  + MGP  P  K     Y YV++ TD ++RM+E++LLR + ET +
Sbjct:  134 LQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFGKPEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVITRMREMYLLRDRTETTQ 350          
BLAST of mRNA_H-elongata_contig79216.15583.1 vs. uniprot
Match: A0A6H5KMG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG5_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 8.520e-42
Identity = 83/211 (39.34%), Postives = 122/211 (57.82%), Query Frame = 0
Query:    1 MHALVVPGLGCNIFSPKANLRNGVKHVLEAGNPHLSVGDVVIPLVQDPQDQGLCSLNIGFQSD----------PHDKMCSKCDNVLQDDATPGVAYVAETSPDIWDRRLGHMNIRNMNLLRRKEGIGVNYTGTVSNCDICAVTKSRQQAHPKTITRKTTKPMELVYMNLMGPTTPATK---GGYKYVSQFTDDVSRMKEIFLLRSKMETAE 198
            +   +VPGLG NIFSP + L+ G++ V+E   PHL+    VIPL QDP+DQG+C+L+I F+ +          PH K             T         S D W RRLGH+N R++++LR+  G GV+Y  ++S C +C + K +Q  HPK  TR+ ++P +LV +  MGP  P  K   G + YV + TDD ++MK+++LLR K +T E
Sbjct:  238 IQGFIVPGLGRNIFSPTSLLKKGLRCVVEESTPHLTFQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQT--------HTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIGNMGPVNPPAKYKGGSFPYVRKITDDYTKMKKVYLLRKKSDTTE 440          
BLAST of mRNA_H-elongata_contig79216.15583.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 1.940e-41
Identity = 83/211 (39.34%), Postives = 122/211 (57.82%), Query Frame = 0
Query:    1 MHALVVPGLGCNIFSPKANLRNGVKHVLEAGNPHLSVGDVVIPLVQDPQDQGLCSLNIGFQSD----------PHDKMCSKCDNVLQDDATPGVAYVAETSPDIWDRRLGHMNIRNMNLLRRKEGIGVNYTGTVSNCDICAVTKSRQQAHPKTITRKTTKPMELVYMNLMGPTTPATK---GGYKYVSQFTDDVSRMKEIFLLRSKMETAE 198
            +  L+VPGLG NIFSP + L+ G++ V E   PHL++   VIPL QDP+DQG+C+L+I F+ +          PH K             T         S D W RRLGH+N R++++LR+  G  V+Y  ++S C +C + K +Q  HPK  TR+ ++P +LV ++ MGP  P  K   G + Y  + TDD ++MKE++LLR K +T E
Sbjct:  273 IQGLIVPGLGRNIFSPTSLLKRGLRCVGEKSTPHLTIQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQT--------HTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTEVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKVTDDYTKMKEVYLLRKKSDTTE 475          
BLAST of mRNA_H-elongata_contig79216.15583.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 4.070e-41
Identity = 85/222 (38.29%), Postives = 125/222 (56.31%), Query Frame = 0
Query:    1 MHALVVPGLGCNIFS-----------PKANLRNGVKHVLEAGNPHLSVGDVVIPLVQDPQDQGLCSLNIGFQSD----------PHDKMCSKCDNVLQDDATPGVAYVAETSPDIWDRRLGHMNIRNMNLLRRKEGIGVNYTGTVSNCDICAVTKSRQQAHPKTITRKTTKPMELVYMNLMGPTTPATK---GGYKYVSQFTDDVSRMKEIFLLRSKMETAE 198
            +  L+VPGLG NIFS           P + L+ G++ V+E   PHL++ D VIPL QDP+DQG+C+L+I F+ +          PH K             T         S D W RRLGH+N R++++LR+  G GV+Y  ++S C +C + K +Q  HPK  TR+ ++P +LV ++ MGP  P  K   G + Y  + TDD ++MKE++LLR K +T E
Sbjct:  314 IQGLIVPGLGRNIFSSRTLLLGMDFSPTSLLKKGLRCVVEESTPHLTIQDKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQT--------HTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTREISRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTE 527          
BLAST of mRNA_H-elongata_contig79216.15583.1 vs. uniprot
Match: A0A6H5KJB9_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB9_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 9.900e-41
Identity = 91/217 (41.94%), Postives = 126/217 (58.06%), Query Frame = 0
Query:    1 MHALVVPGLGCNIFSPKANLRNGVKHVLEAGNPHLSVG-DVVIPLVQDPQDQGLCSLNIGFQSDPHDKMCSKCDN-------------VLQDDATPGV--AYVAETSPDIWDRRLGHMNIRNMNLLRRKEGIGVNYTGTVSNCDICAVTKSRQQAHPKTITRKTTKPMELVYMNLMGPTTPATKGG---YKYVSQFTDDVSRMKEIFLLRSKMETAE 198
            +  L+VPGLG NIF+P A L+ G++ VLE   PHL++G +VV+PL Q+ QDQG+C+L I F+ DP     +  +N              +Q D TP    +     S D+W RRLGH+N R M +LRR    GV Y G VS CD C +TK ++   PK  +R  TKP +LV  + MGP  P  K     Y YV++ TD  +RM+E++LLR + ET +
Sbjct:  442 LQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFRKQEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQ 658          
BLAST of mRNA_H-elongata_contig79216.15583.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 1.230e-40
Identity = 91/217 (41.94%), Postives = 126/217 (58.06%), Query Frame = 0
Query:    1 MHALVVPGLGCNIFSPKANLRNGVKHVLEAGNPHLSVG-DVVIPLVQDPQDQGLCSLNIGFQSDPHDKMCSKCDN-------------VLQDDATPGV--AYVAETSPDIWDRRLGHMNIRNMNLLRRKEGIGVNYTGTVSNCDICAVTKSRQQAHPKTITRKTTKPMELVYMNLMGPTTPATKGG---YKYVSQFTDDVSRMKEIFLLRSKMETAE 198
            +  L+VPGLG NIF+P A L+ G++ VLE   PHL++G +VV+PL Q+ QDQG+C+L I F+ DP     +  +N              +Q D TP    +     S D+W RRLGH+N R M +LRR    GV Y G VS CD C +TK ++   PK  +R  TKP +LV  + MGP  P  K     Y YV++ TD  +RM+E++LLR + ET +
Sbjct:  442 LQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFRKPEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKNTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQ 658          
BLAST of mRNA_H-elongata_contig79216.15583.1 vs. uniprot
Match: A0A6H5JUN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN9_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.660e-40
Identity = 91/217 (41.94%), Postives = 126/217 (58.06%), Query Frame = 0
Query:    1 MHALVVPGLGCNIFSPKANLRNGVKHVLEAGNPHLSVG-DVVIPLVQDPQDQGLCSLNIGFQSDPHDKMCSKCDN-------------VLQDDATPGV--AYVAETSPDIWDRRLGHMNIRNMNLLRRKEGIGVNYTGTVSNCDICAVTKSRQQAHPKTITRKTTKPMELVYMNLMGPTTPATKGG---YKYVSQFTDDVSRMKEIFLLRSKMETAE 198
            +  L+VPGLG NIF+P A L+ G++ VLE   PHL++G +VV+PL Q+ QDQG+C+L I F+ DP     +  +N              +Q D TP    +     S D+W RRLGH+N R M +LRR    GV Y G VS CD C +TK ++   PK  +R  TKP +LV  + MGP  P  K     Y YV++ TD  +RM+E++LLR + ET +
Sbjct:  461 LQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASTSKTPPNNQEPGRKPKFGKPEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQ 677          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79216.15583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYD3_9PHAE4.340e-5449.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY69_9PHAE4.630e-4441.67Peptidase A2 domain-containing protein n=1 Tax=Ect... [more]
A0A6H5K9M6_9PHAE1.100e-4238.86gag_pre-integrs domain-containing protein n=1 Tax=... [more]
A0A6H5K6T1_9PHAE4.070e-4241.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMG5_9PHAE8.520e-4239.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVF6_9PHAE1.940e-4139.34Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KT84_9PHAE4.070e-4138.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJB9_9PHAE9.900e-4141.94Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
A0A6H5K3T5_9PHAE1.230e-4041.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUN9_9PHAE1.660e-4041.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 141..198
e-value: 1.9E-5
score: 25.9
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 88..135
e-value: 8.2E-7
score: 28.8
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 72..197
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 72..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79216contigH-elongata_contig79216:2194..2787 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79216.15583.1mRNA_H-elongata_contig79216.15583.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig79216 2194..2787 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig79216.15583.1 ID=prot_H-elongata_contig79216.15583.1|Name=mRNA_H-elongata_contig79216.15583.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp
MHALVVPGLGCNIFSPKANLRNGVKHVLEAGNPHLSVGDVVIPLVQDPQD
QGLCSLNIGFQSDPHDKMCSKCDNVLQDDATPGVAYVAETSPDIWDRRLG
HMNIRNMNLLRRKEGIGVNYTGTVSNCDICAVTKSRQQAHPKTITRKTTK
PMELVYMNLMGPTTPATKGGYKYVSQFTDDVSRMKEIFLLRSKMETAE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR025724GAG-pre-integrase_dom
IPR039537Retrotran_Ty1/copia-like