mRNA_H-elongata_contig79196.15581.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig79196.15581.1 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI) HSP 1 Score: 469 bits (1207), Expect = 2.230e-154 Identity = 227/353 (64.31%), Postives = 272/353 (77.05%), Query Frame = 1
Query: 4 QDQLRWNTRMGSSKGLRFHPATLRIAIYMHGVAGSAGYNMLRNFIHLPSPRRVQ*LQAQAAPPRTGVLVDNIKKYGRLAAEQDADKADLTGVLSWDLMHLSKNGFDFAPKERGLTGLVDEATFFNPVYQGKVDEDGDLDKQLDKILATQYVEMFFVSLGNPEYKFVVWREAVRSLSTDYIQRMLTRTMRFLAMAHPDKGFDVIATVCDGASEHRSFHTRASTEAFRAWSKGASETPFDEFKMGFLHPHHLHVVFNMSDPMHILKKIVNALWHSDIPEKQRSLGMWLPNNEGELEFSLFSLKTGERVFDEIGNEGGRVPLNELAGSVRVFRNHLAAMWNRTSHSCMNVSHSAKV 1062
+DQ++WNT G +KG RFHPAT+R+AIY+ G+AG+A YNMLRN +HLPSP R++ L+ AAPPRTGVL +NI KYG+LAA QDADK DL GVL+WDLMHL+KNGF FAP G TGLVDE TFFNP+Y+ + +++ L+KI+ATQYVEMFFVS+G PEYKFVVWREAVRSLSTDYIQRML R MR+LAMAHPDK FDVIAT CDGA EHRSF T A+ F W KG E F FK+GFLHP HLH VFNMSDPMHILKKIVNALWHSDIP KQR LGMW ++ EL+FS FSLKT +RV++++ + + E A ++ +F +NRT+ +CMNV SAKV
Sbjct: 445 EDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLRNVLHLPSPERIKQLRRNAAPPRTGVLTENILKYGKLAATQDADKVDLMGVLTWDLMHLNKNGFSFAPNGGGFTGLVDETTFFNPIYKHEGGVVKEVEPILEKIVATQYVEMFFVSIGKPEYKFVVWREAVRSLSTDYIQRMLIRAMRYLAMAHPDKAFDVIATECDGAPEHRSFQTHAAILGFCHWIKGPKEGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERAATLTIFPGMPVGAFNRTNFTCMNVKLSAKV 797
BLAST of mRNA_H-elongata_contig79196.15581.1 vs. uniprot
Match: A0A6H5KVF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF4_9PHAE) HSP 1 Score: 464 bits (1194), Expect = 2.950e-153 Identity = 223/353 (63.17%), Postives = 270/353 (76.49%), Query Frame = 1
Query: 4 QDQLRWNTRMGSSKGLRFHPATLRIAIYMHGVAGSAGYNMLRNFIHLPSPRRVQ*LQAQAAPPRTGVLVDNIKKYGRLAAEQDADKADLTGVLSWDLMHLSKNGFDFAPKERGLTGLVDEATFFNPVYQGKVDEDGDLDKQLDKILATQYVEMFFVSLGNPEYKFVVWREAVRSLSTDYIQRMLTRTMRFLAMAHPDKGFDVIATVCDGASEHRSFHTRASTEAFRAWSKGASETPFDEFKMGFLHPHHLHVVFNMSDPMHILKKIVNALWHSDIPEKQRSLGMWLPNNEGELEFSLFSLKTGERVFDEIGNEGGRVPLNELAGSVRVFRNHLAAMWNRTSHSCMNVSHSAKV 1062
+DQ++WNT G +KG RFHPAT+R+AIY+ G+AG+A YNMLRN +HLPSP R++ L+ AAPPRT VL +NI KYG+LAA QDADK DL GVL+WDLMHL+KNGF FAP G TGLVDE FFNP+Y+ + +++ L+KI+ATQYVEMFFVS+G PEYKFVVWREAVRSLSTDYIQRML R MR+LAMAHPDK FDV+AT+CDGA EHRSF T A+ F W KG E F FK+GFLHP HLH VFNMSDPMHILKKIVNALWHSDIP KQR LGMW ++ EL+FS FSLKT +RV++++ + + E ++ +F +NRT+ +CMNV SAKV
Sbjct: 536 EDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLRNVLHLPSPERIKQLRRNAAPPRTCVLTENILKYGKLAATQDADKVDLMGVLTWDLMHLNKNGFSFAPNGGGFTGLVDETAFFNPIYKHEGGVVKEVEPTLEKIVATQYVEMFFVSIGKPEYKFVVWREAVRSLSTDYIQRMLIRVMRYLAMAHPDKAFDVVATICDGAPEHRSFQTHAAILGFCHWIKGPKEGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERPATLTIFPGMPVGAFNRTNFTCMNVKLSAKV 888
BLAST of mRNA_H-elongata_contig79196.15581.1 vs. uniprot
Match: A0A6H5L5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M0_9PHAE) HSP 1 Score: 439 bits (1129), Expect = 6.430e-146 Identity = 222/393 (56.49%), Postives = 269/393 (68.45%), Query Frame = 1
Query: 4 QDQLRWNTRMGSSKGLRFHPATLRIAIYMHGVAGSAGYNMLRNFIHLPSPRRVQ*LQAQAAPPRTGVLVDNIKKYGRLAAEQDADKADLTGVLSWDLMHLSKNGFDFAPKERGLTGLVDEATFFNPVYQGKVDEDGDLDKQLDKILATQYVEMFFVSLGNPEYKFVVWREAVRSLSTDYIQRMLTRTMRFLAMAHPDKGFDVIATVCDGAS----------------------------------------EHRSFHTRASTEAFRAWSKGASETPFDEFKMGFLHPHHLHVVFNMSDPMHILKKIVNALWHSDIPEKQRSLGMWLPNNEGELEFSLFSLKTGERVFDEIGNEGGRVPLNELAGSVRVFRNHLAAMWNRTSHSCMNVSHSAKV 1062
QDQ++WNT G +KG RFHPAT+R+AIY+ G+AG+A YNML N +HLPSP R++ L+ AAPPRTGVL +NI K G+LAA QD DKADL GVL+WDLMHL+KNGF FAP G TGLVDE TFFNP+Y+ + +++ L+KI+ATQYVEM+FVS+G PEYKFVVWREAVRSLSTD+IQRML R MR LAMAHPDK FDVIATVCDGA + RSF T A+ F W KG E F FK+G LHP HLH VFNMSDPMHILKKIVNALWHSDIP KQR LGMW ++ EL+FS FSLKT +RV++++ + + E A ++ +F + +NRT+ +CMNV SAKV
Sbjct: 303 QDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLTNVLHLPSPERIKQLRRNAAPPRTGVLTENILKNGKLAATQDTDKADLMGVLAWDLMHLNKNGFSFAPNGGGFTGLVDETTFFNPIYKHEGGIVKEVEPILEKIVATQYVEMYFVSVGKPEYKFVVWREAVRSLSTDFIQRMLIRVMRSLAMAHPDKAFDVIATVCDGAPGQLGEVTLVVAKWMTLERPCVEPYFMIGPFPLVAPSRTPLDSRSFQTHAAISGFCRWIKGPQEGSFTSFKVGILHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNNSITPEERAATLTIFPGMPVSAFNRTNFTCMNVKLSAKV 695
BLAST of mRNA_H-elongata_contig79196.15581.1 vs. uniprot
Match: D7G5R1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R1_ECTSI) HSP 1 Score: 391 bits (1005), Expect = 7.680e-134 Identity = 195/213 (91.55%), Postives = 200/213 (93.90%), Query Frame = 1
Query: 1 LQDQLRWNTRMGSSKGLRFHPATLRIAIYMHGVAGSAGYNMLRNFIHLPSPRRVQ*LQAQAAPPRTGVLVDNIKKYGRLAAEQDADKADLTGVLSWDLMHLSKNGFDFAPKERGLTGLVDEATFFNPVYQGKVDEDGDLDKQLDKILATQYVEMFFVSLGNPEYKFVVWREAVRSLSTDYIQRMLTRTMRFLAMAHPDKGFDVIATVCDGASE 639
+DQLRWNTRM SSKG RFHPATLRIAIYMHGVAGSAGYNMLRNFIHLPSPRRVQ LQAQAAPPRTGVLVDNI+KYGRLAAEQDADKADLTGVLSWDL HLSKNG DFAPKE LTGLVDEATFFNPVYQGKVDEDG L KQL KILATQYVE FFVSLGNPEYKFVVWREAVRSLSTDYIQRMLTRTMRFL++AH DKGFDV+ATVCDGASE
Sbjct: 62 FEDQLRWNTRMASSKGFRFHPATLRIAIYMHGVAGSAGYNMLRNFIHLPSPRRVQQLQAQAAPPRTGVLVDNIRKYGRLAAEQDADKADLTGVLSWDLTHLSKNGLDFAPKEGRLTGLVDEATFFNPVYQGKVDEDGGLGKQLGKILATQYVE-FFVSLGNPEYKFVVWREAVRSLSTDYIQRMLTRTMRFLSIAHRDKGFDVVATVCDGASE 273
BLAST of mRNA_H-elongata_contig79196.15581.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 264 bits (674), Expect = 6.310e-79 Identity = 157/354 (44.35%), Postives = 210/354 (59.32%), Query Frame = 1
Query: 22 NTRMGSSKGLRFHPATLRIAIYMHGVAGSAGYNMLRNFIHLPSPRRVQ*LQAQAAPPRT-GVLVDNIKKYGRLAAEQDADKADLTGVLSWDLMHLSKNGFDFAPKERGLTGLVD-EATFFNPV--YQGKVDEDGDLDKQLDKILATQYVEMFFVSLGNPEYKFVVWREAVRSLSTDYIQRMLTRTMRFLAMAHPDKGFDVIATVCDGASEHRSFHTRASTEAFRAWS--KGASETPFDEFKMGFLHPHHLHVVFNMSDPMHILKKIVNALWHSDIPEKQRSLG--MWLPNNEGELEFSLFSLKTGERVFDEIGNEGGRVPLNELAGSVRVFRNHLAAMWNRTSHSCMNVSHSAK 1059
N R G KG R+ P +R Y G AGY ++R+ +HLPS V + T G+ D I+ +G++AAE++ + DL G+L WD MHL+ NGF P G++GLV ++ ++P+ QG VD+ L+ L+ +ATQY+E+++VS+GNP+YKF V+REAVR LS I RML M L AHPDK DVI TVCDGA EHRSF T+ +T F W+ K E F +F M F HPHH VFNMS P H+L +VNALW+S +P KQR L W + E E E+ FSLKT E V+ GG + E+A ++R F M +R SH+CM+V SAK
Sbjct: 81 NEREGPKKGWRYSPKVVRWYCYALAKMGKAGYALIRDILHLPSISTVNRARRAGRGTATWGLQHDLIEAHGKMAAEENLGRFDLAGILCWDCMHLNTNGFTVRPNGGGISGLVSGDSVLYHPLEAVQG-VDKTISLEDTLETFMATQYLEVWWVSIGNPKYKFCVYREAVRGLSGPKISRMLDEIMLRLYEAHPDKKIDVIGTVCDGAGEHRSFQTKLATSTFGEWADPKSRLEERFADFPMAFNHPHHGEPVFNMSGPPHLLX-VVNALWYSSLPSKQRHLKNLFWNRDTE-EFEWVSFSLKTLETVWVNEERGGGSLSAAEVASNLRRFLKFEPEMLDRNSHNCMSVRLSAK 431
BLAST of mRNA_H-elongata_contig79196.15581.1 vs. uniprot
Match: A0A6H5KFP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP1_9PHAE) HSP 1 Score: 265 bits (677), Expect = 1.100e-77 Identity = 159/380 (41.84%), Postives = 216/380 (56.84%), Query Frame = 1
Query: 1 LQDQLRWNTRMGSSKGLRFHPATLRIAIYMHGVAGSAGYNMLRNFIHLPSPRRVQ*LQAQAAPPRTGVLVDNIKKYGRLAAEQDADKA--------------------DLTGVLSWDLMHLSKNGFDFAPKERGLTGLVDEATFFN---PVYQGKVDEDGDLDKQLDKILATQYVEMFFVSLGNPEYKFVVWREAVRSLSTDYIQRMLTRTMRFLAMAHPDKGFDVIATVCDGASEHRSFHTRASTEAFRAWSKGAS--ETPFDEFKMGFLHPHHLHVVFNMSDPMHILKKIVNALWHSDIPEKQRSL-GMWLPNNEGELEFSLFSLKTGERVF-DEIGNEGGRVPLNELAGSVRVFRNHLAAMWNRTSHSCMNVSHSAK 1059
+++ +R+N GS+KG RF+ LR A Y G AGY +LR+ +HLP + VQ + A + + G I+ + ++A E + + DL G+L WDLMHL++N F P G+ GLVD +FF QG VDE L+K L+ +ATQY+E+F+VS+GNP+YKF V+REAVR LS I RML L AH DK FDVI TVCDGA+EHRSF +T F W+K S E ++ + F HPHH VFNMSDP+H+LKK+VNALW+S + K+R L +W E + FSLKT E+ + +E G+ R E A ++R F AA +R SH+CM+V SAK
Sbjct: 270 VEEMMRYNQHRGSAKGWRFNAKVLRWACYALAKMGGAGYQVLRDVLHLPHIKHVQKIVAASTSTKMGEQYHLIEAFAKMACEDNXSTSRYVELFWFYSLLWRPYGLVFDLLGILVWDLMHLNQNDFRVCPNGGGIEGLVDRDSFFRHPLDAVQG-VDEHITLEKTLETFVATQYLEVFWVSIGNPKYKFCVYREAVRGLSGPKISRMLDEITNKLYEAHEDKKFDVIGTVCDGAAEHRSFQQHFATTTFSEWAKSDSVFEQRHKDYPVAFKHPHHDGPVFNMSDPVHLLKKVVNALWYSGLDSKERHLQNLWWNPLTDAPELASFSLKTLEKAWREEEGHRANRTAA-ERAATLRRFLKMDAACLDRDSHTCMSVKLSAK 647
BLAST of mRNA_H-elongata_contig79196.15581.1 vs. uniprot
Match: D7FVM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM8_ECTSI) HSP 1 Score: 241 bits (615), Expect = 2.980e-74 Identity = 118/128 (92.19%), Postives = 121/128 (94.53%), Query Frame = 1
Query: 85 YMHGVAGSAGYNMLRNFIHLPSPRRVQ*LQAQAAPPRTGVLVDNIKKYGRLAAEQDADKADLTGVLSWDLMHLSKNGFDFAPKERGLTGLVDEATFFNPVYQGKVDEDGDLDKQLDKILATQYVEMFF 468
YMHGVAGSAGYNMLRNFIHLPSPRRVQ L+AQAAPPRTGVLVDNI+KYGRLAAEQDADKADLTGVLSWDL HLSKNGFDFAPKE G TGLVDEATFFNPVYQ KVDEDGDLDKQLDKILAT+YVE F
Sbjct: 149 YMHGVAGSAGYNMLRNFIHLPSPRRVQRLEAQAAPPRTGVLVDNIRKYGRLAAEQDADKADLTGVLSWDLTHLSKNGFDFAPKEGGFTGLVDEATFFNPVYQRKVDEDGDLDKQLDKILATKYVERTF 276
BLAST of mRNA_H-elongata_contig79196.15581.1 vs. uniprot
Match: D7G2I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I2_ECTSI) HSP 1 Score: 193 bits (490), Expect = 4.090e-53 Identity = 85/129 (65.89%), Postives = 105/129 (81.40%), Query Frame = 1
Query: 4 QDQLRWNTRMGSSKGLRFHPATLRIAIYMHGVAGSAGYNMLRNFIHLPSPRRVQ*LQAQAAPPRTGVLVDNIKKYGRLAAEQDADKADLTGVLSWDLMHLSKNGFDFAPKERGLTGLVDEATFFNPVYQ 390
+DQ++WNT G +KG RFHPAT+R+AIY+ G+AG+A YNML N +HLPSP R++ L+ AAPPRTGVL +NI KYG+LAA QDADK DL GVL+WDLMHL+K+GF F P G TGLVDE TFFNP+Y+
Sbjct: 403 EDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLMNVLHLPSPERIKQLRRNAAPPRTGVLTENILKYGKLAATQDADKVDLMGVLTWDLMHLNKSGFSFTPNGGGFTGLVDETTFFNPIYK 531
BLAST of mRNA_H-elongata_contig79196.15581.1 vs. uniprot
Match: A0A6H5KQL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQL9_9PHAE) HSP 1 Score: 181 bits (458), Expect = 5.630e-52 Identity = 98/216 (45.37%), Postives = 137/216 (63.43%), Query Frame = 1
Query: 13 LRWNTRMGSSKGLRFHPATLRIAIYMHGVAGSAGYNMLRNFIHLPSPRRVQ*LQAQAAPPRT-GVLVDNIKKYGRLAAEQDADKADLTGVLSWDLMHLSKNGFDFAPKERGLTGLVDEATFFNPVYQGK--VDEDGDLDKQLDKILATQYVEMFFVSLGNPEYKFVVWREAVRSLSTDYIQRMLTRTMRFLAMAHPDKGFDVIATVCDGASEHRSF 651
+ +N GSSKG RF P LR A+Y GSAGYN++++ +HLPS ++ ++ AA T GV ++ YG++AAE + + DL G+L WDLMHL+ NGF P G+ GLVD + G V ++ L++ L+ +ATQY+E+F+VS+GN +YKF V+REAV+ L+ ++RML M L H DK FDVI TVCDGA+EHRSF
Sbjct: 2 MNYNKFQGSSKGWRFSPKVLRWALYALANMGSAGYNVIQDVLHLPSIGHLRKVRRAAAGTTTWGVQHHLVEAYGKMAAEDNLGRFDLCGILVWDLMHLNTNGFKVRPNGGGIQGLVDPDSILRHPLDGVKGVADNISLEETLETFVATQYLEVFWVSIGNLKYKFCVYREAVKGLTGPKLKRMLNEVMLRLYTVHEDKQFDVICTVCDGAAEHRSF 217
BLAST of mRNA_H-elongata_contig79196.15581.1 vs. uniprot
Match: D8LK65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK65_ECTSI) HSP 1 Score: 182 bits (462), Expect = 9.180e-52 Identity = 103/204 (50.49%), Postives = 128/204 (62.75%), Query Frame = 1
Query: 457 EMFFVSLGNPEYKFVVWREAVRSLSTDYIQRMLTRTMRFLAMAHPDKGFDVIATVCDGASEHRSFHTRASTEAFRAWSKGAS--ETPFDEFKMGFLHPHHLHVVFNMSDPMHILKKIVNALWHSDIPEKQRSLG-MWLPNNEGELEFSLFSLKTGERVFDEIGNEGGRVPLNELAGSVRVFRNHLAAMWNRTSHSCMNVSHSAK 1059
++F+VSLGNP YKF V+REAVR L+ + RML M L AH DK FDVI TVCDGA+EHRSF + AF W++G S E +FK+ F HP H VFNMSDP+H+LKK+VNALWHSDIP KQR L +W + E+ FSLKT E+V+ E GG + E A + F M+ R SH+CM+V SAK
Sbjct: 58 KVFWVSLGNPTYKFCVFREAVRGLTGPKLARMLDDIMTSLYQAHSDKNFDVIGTVCDGAAEHRSFQKYLAEIAFSEWARGDSAFEKRMGDFKVAFKHPSHGGPVFNMSDPVHLLKKVVNALWHSDIPSKQRDLKKLWYNEAAEDYEWVSFSLKTLEKVWKEEEAGGGVRSVAEQAAHLIRFLKFDPEMFTRNSHNCMSVGLSAK 261 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79196.15581.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig79196.15581.1 >prot_H-elongata_contig79196.15581.1 ID=prot_H-elongata_contig79196.15581.1|Name=mRNA_H-elongata_contig79196.15581.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=256bp MHLSKNGFDFAPKERGLTGLVDEATFFNPVYQGKVDEDGDLDKQLDKILAback to top mRNA from alignment at H-elongata_contig79196:145..2780+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig79196.15581.1 ID=mRNA_H-elongata_contig79196.15581.1|Name=mRNA_H-elongata_contig79196.15581.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2636bp|location=Sequence derived from alignment at H-elongata_contig79196:145..2780+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig79196:145..2780+ >mRNA_H-elongata_contig79196.15581.1 ID=mRNA_H-elongata_contig79196.15581.1|Name=mRNA_H-elongata_contig79196.15581.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1536bp|location=Sequence derived from alignment at H-elongata_contig79196:145..2780+ (Himanthalia elongata Himel1 dioecious)back to top |