mRNA_H-elongata_contig79185.15578.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig79185.15578.1
Unique NamemRNA_H-elongata_contig79185.15578.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: A0A6H5KDB2_9PHAE (PAPS_reduct domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KDB2_9PHAE)

HSP 1 Score: 441 bits (1133), Expect = 1.050e-154
Identity = 201/234 (85.90%), Postives = 220/234 (94.02%), Query Frame = 1
Query:    4 IFEKTRIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLDKIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHSK 705
            +FE+ R+  LE QL +SL  V   KKNP+FTTALIAGDCVILDAIAKAGLLDKIKVVF+DT+FLFPES+DF+HEVE+HYGFKA +Y CADC T+++FYDKYGEDYWMEDID+YDKKCKVEPLMR+LKE++TEAWINGRRRDHGFERAALP+WEG KFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHSK
Sbjct:   80 LFEEVRMSNLESQLADSLAKVVAEKKNPIFTTALIAGDCVILDAIAKAGLLDKIKVVFVDTYFLFPESLDFLHEVEEHYGFKASIYHCADCETQQDFYDKYGEDYWMEDIDQYDKKCKVEPLMRALKEAETEAWINGRRRDHGFERAALPVWEGTKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHSK 313          
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: A0A835YS08_9STRA (Phosphoadenylyl-sulfate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS08_9STRA)

HSP 1 Score: 405 bits (1040), Expect = 1.230e-140
Identity = 187/231 (80.95%), Postives = 211/231 (91.34%), Query Frame = 1
Query:   10 EKTRIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLDKIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHS 702
            E +RI +LE+ L E+LK V+++K+ PVFTTALIAGDCVILDAIAKAGLLDKI V+FIDTFFLFPES++FI E+E HYGFKAK Y  AD AT+EEFY+KYGEDYWMEDID+YD KCKVEPL R+L+E++T+AWINGRRRDHG ERAALP+WEG K NPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLE WF+YGGERSGRFEG+KNKDGS KTECGIH+
Sbjct:   73 EASRIAYLEQSLAETLKKVSQVKERPVFTTALIAGDCVILDAIAKAGLLDKIDVIFIDTFFLFPESLEFIEELEQHYGFKAKRYHAADVATQEEFYEKYGEDYWMEDIDQYDLKCKVEPLQRALRETNTDAWINGRRRDHGAERAALPVWEGTKVNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLEKWFTYGGERSGRFEGLKNKDGSLKTECGIHT 303          
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: A0A835Z3Q9_9STRA (Phosphoadenylyl-sulfate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Q9_9STRA)

HSP 1 Score: 400 bits (1029), Expect = 6.450e-139
Identity = 180/231 (77.92%), Postives = 209/231 (90.48%), Query Frame = 1
Query:   10 EKTRIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLDKIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHS 702
            E+ RI +LE+ +  SLK + E+K  P+FTTALIAGDCVILDA+AKA LLD++ VVFIDT+FLFPES++F+ E+E HYGFKAKVY  ADCAT+EEFY+KYGEDYWMEDID+YD KCKVEPL R+L+E++T+AWINGRRRDHGFERAALP+WEG K NPLAFW+FEDCWTYLRKH VPYHPLHDVGFSSLGDMQSTRKVPL+ WF+YGGERSGRFEG+KNKDGS KTECGIH+
Sbjct:   76 EEARIQYLEDSMMASLKKMMEVKTKPMFTTALIAGDCVILDALAKAQLLDRVDVVFIDTYFLFPESLEFLRELEAHYGFKAKVYHAADCATQEEFYEKYGEDYWMEDIDQYDLKCKVEPLQRALREAETDAWINGRRRDHGFERAALPVWEGNKVNPLAFWTFEDCWTYLRKHKVPYHPLHDVGFSSLGDMQSTRKVPLDKWFTYGGERSGRFEGLKNKDGSNKTECGIHT 306          
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: A0A4D9D472_9STRA (PAPS_reduct domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D472_9STRA)

HSP 1 Score: 395 bits (1016), Expect = 5.520e-137
Identity = 179/232 (77.16%), Postives = 203/232 (87.50%), Query Frame = 1
Query:   10 EKTRIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLDKIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHSK 705
            E+  ++FLE QL   LK   E+KK P+FTTALIAGDCV+LD IAKAGLLDKI++VFIDTFFLFPE++DF+ EVE+HYGFKAKVY CADC T+E FYDKYG DYWMEDID+YD KCKVEPL R+LKES T+AWINGRRRDHG ERA+LP+WEG K NP+AFW+FEDCW YLRKHNVPYHPLHDVGFSSLGDMQST KVPLE W +Y GERSGRF+G+ NKDGS KTECGIH+K
Sbjct:   76 EQQTLEFLEGQLSSVLKKAVEIKKKPLFTTALIAGDCVLLDGIAKAGLLDKIEIVFIDTFFLFPETLDFLREVEEHYGFKAKVYHCADCPTQESFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDKVNPIAFWTFEDCWNYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYAGERSGRFQGLTNKDGSAKTECGIHTK 307          
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: A0A7S3XUP3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUP3_HETAK)

HSP 1 Score: 377 bits (968), Expect = 1.870e-129
Identity = 168/231 (72.73%), Postives = 201/231 (87.01%), Query Frame = 1
Query:   10 EKTRIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLDKIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHS 702
            E T++DFL  QL E+LK   EMKK P+FTTA IAGDCV+LDAI KAGL+DK++++FIDT+ LFPESI F+ E+E+HYGFKAKVY   DC T+E +Y+KYGEDYWMEDID YD KCKVEPL R+L+E D++ WINGRRRDHG ERAALP+WEG K NPLAFW+FEDCW+YLRK++VPYHPLHDVGFSS+GD+QSTRKV  + WF+YGGERSGRFEG+KNKDGS KTECG+H+
Sbjct:   87 ENTKLDFLTAQLTETLKKAVEMKKRPIFTTAEIAGDCVLLDAIHKAGLIDKVEIIFIDTYHLFPESIAFLKEIEEHYGFKAKVYHAEDCETQEIYYEKYGEDYWMEDIDAYDMKCKVEPLQRALREHDSDCWINGRRRDHGAERAALPVWEGTKLNPLAFWTFEDCWSYLRKYDVPYHPLHDVGFSSMGDVQSTRKVDHKVWFTYGGERSGRFEGLKNKDGSAKTECGLHT 317          
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: A0A6U2BYW2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2BYW2_HEMAN)

HSP 1 Score: 321 bits (822), Expect = 2.870e-107
Identity = 149/231 (64.50%), Postives = 182/231 (78.79%), Query Frame = 1
Query:   10 EKTRIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLDKIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHS 702
            EK+R+ +LEEQL   LK  AE  +NPVFTTALIAGD VIL  I KAGL DKIKVVFIDT+ LFPE+++F+  VE HYGFKA  Y   DCA+ EEF +KYG+D ++ED++EYD+  KVEPL+R LKE+ T+ W+NGRRRDHGFERAAL +WE +K NPLA+W+FEDCW Y+R   VPYHPLHD G+ SLGDM ST +V  + WF YG ER+GRF+ M+N DGS KTECGIH+
Sbjct:   81 EKSRLAYLEEQLLSDLKNAAERFENPVFTTALIAGDDVILHGINKAGLFDKIKVVFIDTYHLFPETLEFLETVEKHYGFKALRYAPKDCASPEEFEEKYGDDLFLEDVEEYDRLAKVEPLLRGLKENKTKLWVNGRRRDHGFERAALEVWEDEKMNPLAYWTFEDCWKYIRAEGVPYHPLHDDGYPSLGDMHSTLRVDKDKWFQYGMERAGRFQNMQNADGSPKTECGIHT 311          
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: A0A7S0Z0Y0_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z0Y0_9CRYP)

HSP 1 Score: 316 bits (809), Expect = 7.570e-106
Identity = 146/231 (63.20%), Postives = 183/231 (79.22%), Query Frame = 1
Query:   10 EKTRIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLDKIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHS 702
            E+ R+ +LE+QL   LK+ AE  +NPVFTTALIAGD VIL AI KAGLLD+IKV+FIDT+ LFPE+++F+ +VE HYGFKA  Y    CA+ EEF +KYG+D ++ED++EYD+  KVEPL+R LKE+ T+ WINGRRRDHGFERAAL +WE +K NPLAFW+FEDCW Y+    VPYHPLHD G+ S+GDM ST +V  + WF YG ER+GRF+ M+N DGS KTECGIH+
Sbjct:   41 ERNRLAYLEKQLLSDLKSAAEQFENPVFTTALIAGDDVILHAIHKAGLLDRIKVLFIDTYHLFPETLEFMDKVEGHYGFKALRYGPKGCASPEEFEEKYGDDLFLEDVEEYDRLAKVEPLLRGLKENKTKLWINGRRRDHGFERAALEVWEDEKMNPLAFWTFEDCWNYIHAQGVPYHPLHDDGYPSVGDMHSTLRVDKDKWFQYGMERAGRFQNMQNADGSAKTECGIHT 271          
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: L1J678_GUITC (PAPS_reduct domain-containing protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J678_GUITC)

HSP 1 Score: 303 bits (776), Expect = 1.470e-100
Identity = 138/229 (60.26%), Postives = 178/229 (77.73%), Query Frame = 1
Query:   16 TRIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLDKIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHS 702
            +R+ +LE+Q  + L       +NPVFTTALIAGD VIL  + K+GLL K+K+VFIDT  LFPE+++F+ +VE  YGFKA +Y+   C T+EEF +KYG+D ++EDI+ YDK  KVEPL+R+L+ES T+ WINGRRRD GFERAAL +WE +K NP+AFW+FEDCW Y+ +H VPYHPLHD G+ SLGDM ST +V  E WF YG ER+GRF+ M+N DGS+KTECGIH+
Sbjct:   73 SRLKYLEQQAIDDLILAVAKYENPVFTTALIAGDDVILHILHKSGLLPKVKIVFIDTLHLFPETLEFLEKVEKFYGFKAVIYKAEGCETREEFDEKYGDDIFIEDIETYDKVAKVEPLLRALRESKTKLWINGRRRDQGFERAALEVWEKEKMNPIAFWTFEDCWKYIEQHKVPYHPLHDDGYPSLGDMHSTLRVEKEKWFLYGMERAGRFQNMQNPDGSDKTECGIHT 301          
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: D8QN92_SELML (PAPS_reduct domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QN92_SELML)

HSP 1 Score: 273 bits (698), Expect = 1.290e-88
Identity = 133/233 (57.08%), Postives = 164/233 (70.39%), Query Frame = 1
Query:   19 RIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLDK--IKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEGQKF---NPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHS 702
            R+  LE Q K  L+   E  + P F  ALIAGD V+LD + K G  +K  +KV+FIDTF LFPE+  F+  +ED YGFKA+V+  AD  TKEE+  K+G D ++ DIDEYDK CKVEP  R+L     +A INGRRRDHG ERA L + +  K     PLA+W F DCW+YL+K++VPYHPLHD G+ S+GD+QST  VP E WF YGGERSGRF+G+ NKDGS KTECGIHS
Sbjct:   77 RLQHLESQAKSVLQKTIECFERPAFPCALIAGDVVMLDLLHKIGAFEKEAVKVIFIDTFHLFPETYTFLKSLEDKYGFKARVFHAADFNTKEEYLAKHGSDLYIRDIDEYDKICKVEPFNRALSSLQVDAMINGRRRDHGAERAHLEVAQAGKMVNVQPLAYWEFRDCWSYLKKNSVPYHPLHDKGYPSIGDVQSTLPVPKEKWFEYGGERSGRFQGLSNKDGSLKTECGIHS 309          
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: A0A2R6X602_MARPO (PAPS_reduct domain-containing protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X602_MARPO)

HSP 1 Score: 270 bits (690), Expect = 3.500e-87
Identity = 126/233 (54.08%), Postives = 163/233 (69.96%), Query Frame = 1
Query:   19 RIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLD--KIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEG---QKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHS 702
            R+  LE Q   +L+   E  + P F  ALI GD VILD +++ G  D  K+K++FIDT  LFPE++ F+  VE  YG KA ++Q A  A K+E+ +KYG D ++ D+DEYD+ CKVEP  R+LK  + +A +NGRRRDHG ERA L ++EG    K  PLA+W F DCW Y+ K+ +PYHPLHD G+ S+GDMQST  VP   WF YGGERSGRF+G+KNKDGS KTECGIH+
Sbjct:   91 RLSILETQALNALRKTIENYQRPAFPCALITGDVVILDLLSRVGAFDDEKVKIIFIDTLHLFPETLTFLAAVEKRYGCKAHIFQAAGMANKQEYDEKYGSDLFIRDVDEYDRICKVEPFSRALKTLEVDAMVNGRRRDHGAERAHLEIFEGGDMAKVQPLAYWEFRDCWDYIEKYQLPYHPLHDQGYPSIGDMQSTLPVPKSQWFEYGGERSGRFQGIKNKDGSTKTECGIHA 323          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDB2_9PHAE1.050e-15485.90PAPS_reduct domain-containing protein n=2 Tax=Ecto... [more]
A0A835YS08_9STRA1.230e-14080.95Phosphoadenylyl-sulfate reductase n=1 Tax=Tribonem... [more]
A0A835Z3Q9_9STRA6.450e-13977.92Phosphoadenylyl-sulfate reductase n=1 Tax=Tribonem... [more]
A0A4D9D472_9STRA5.520e-13777.16PAPS_reduct domain-containing protein n=2 Tax=Mono... [more]
A0A7S3XUP3_HETAK1.870e-12972.73Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6U2BYW2_HEMAN2.870e-10764.50Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0Z0Y0_9CRYP7.570e-10663.20Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
L1J678_GUITC1.470e-10060.26PAPS_reduct domain-containing protein (Fragment) n... [more]
D8QN92_SELML1.290e-8857.08PAPS_reduct domain-containing protein n=2 Tax=Sela... [more]
A0A2R6X602_MARPO3.500e-8754.08PAPS_reduct domain-containing protein n=3 Tax=Marc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79185contigH-elongata_contig79185:56..2728 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score436.4
Seed ortholog evalue8.4e-120
Seed eggNOG ortholog2880.D7FUM6
KEGG rclassRC00007,RC02862
KEGG koko:K00390
KEGG ReactionR02021
KEGG Pathwayko00920,ko01100,ko01120,map00920,map01100,map01120
KEGG ModuleM00176
EggNOG free text desc.phosphoadenylyl-sulfate reductase (thioredoxin) activity
EggNOG OGsCOG0175@1,KOG0189@2759
EC1.8.4.10,1.8.4.8
COG Functional cat.EH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPhosphoadenylyl-sulfate reductase (thioredoxin)
Ec32 orthologEc-26_002130.1
Exons6
Model size708
Cds size708
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79185.15578.1prot_H-elongata_contig79185.15578.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig79185 56..2728 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931196.634335-CDS-H-elongata_contig79185:55..1661622931196.634335-CDS-H-elongata_contig79185:55..166Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79185 56..166 -
1691679737.3152554-CDS-H-elongata_contig79185:55..1661691679737.3152554-CDS-H-elongata_contig79185:55..166Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79185 56..166 -
1622931196.7076752-CDS-H-elongata_contig79185:622..7481622931196.7076752-CDS-H-elongata_contig79185:622..748Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79185 623..748 -
1691679737.3259084-CDS-H-elongata_contig79185:622..7481691679737.3259084-CDS-H-elongata_contig79185:622..748Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79185 623..748 -
1622931196.7308657-CDS-H-elongata_contig79185:1050..12191622931196.7308657-CDS-H-elongata_contig79185:1050..1219Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79185 1051..1219 -
1691679737.333884-CDS-H-elongata_contig79185:1050..12191691679737.333884-CDS-H-elongata_contig79185:1050..1219Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79185 1051..1219 -
1622931196.7517679-CDS-H-elongata_contig79185:1704..17811622931196.7517679-CDS-H-elongata_contig79185:1704..1781Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79185 1705..1781 -
1691679737.3512332-CDS-H-elongata_contig79185:1704..17811691679737.3512332-CDS-H-elongata_contig79185:1704..1781Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79185 1705..1781 -
1622931196.769209-CDS-H-elongata_contig79185:2092..22451622931196.769209-CDS-H-elongata_contig79185:2092..2245Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79185 2093..2245 -
1691679737.3605747-CDS-H-elongata_contig79185:2092..22451691679737.3605747-CDS-H-elongata_contig79185:2092..2245Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79185 2093..2245 -
1622931196.791098-CDS-H-elongata_contig79185:2656..27281622931196.791098-CDS-H-elongata_contig79185:2656..2728Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79185 2657..2728 -
1691679737.3710253-CDS-H-elongata_contig79185:2656..27281691679737.3710253-CDS-H-elongata_contig79185:2656..2728Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79185 2657..2728 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig79185.15578.1

>prot_H-elongata_contig79185.15578.1 ID=prot_H-elongata_contig79185.15578.1|Name=mRNA_H-elongata_contig79185.15578.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=236bp
QIFEKTRIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAG
LLDKIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYD
KYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAAL
PLWEGQKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKV
PLENWFSYGGERSGRFEGMKNKDGSEKTECGIHSK*
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mRNA from alignment at H-elongata_contig79185:56..2728-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig79185.15578.1 ID=mRNA_H-elongata_contig79185.15578.1|Name=mRNA_H-elongata_contig79185.15578.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2673bp|location=Sequence derived from alignment at H-elongata_contig79185:56..2728- (Himanthalia elongata Himel1 dioecious)
CAGATATTCGAGAAGACTCGCATTGACTTCCTGGAGGAACAGTTGAAAGA ATCACTCAAGGCCGTCGCTGAGGTGGGCGGGGCGGGAGGGAGCTCCGGGT GAAGCTAACTATTGATATTGATATTGCTTGTGACATGTCGAGGGAGGGGG GAAATACGGGAACGTGTGTGAGGTGGAGCGCAACGCGTTAGTTATCTACA TGGTCCTGAGCTGCATTCCTTTGCATTGATTGGTTGGTTCACCCTTTGTT GGTATTGCTGTTATGCTTCCTTGGTATGCAGTATTAACAGCATGTGATAT GAATATTCAACAGACTTGTTGGCCCATGCCGCCAGTCCTGAACTTTTATA GGTAGGCACTGTGCGGGATCTAGGCATAATCGCAATGTAATCCGGTCTAC AACTCTGCCGCGACTGATGCATGTGCTCTTGTATTACTTCCCCTGTTTTA CATGTTCGCTTCCGGCGATGAACGCTTGGACAGATGAAGAAGAACCCCGT TTTTACGACGGCGCTGATTGCCGGCGATTGTGTTATCCTCGACGCGATCG CGAAAGCTGGTCTTCTGGATAAGATCAAGGTGGTCTTCATCGACACATTT TTCCTCTTCCCTGAGAGCATTGACTTCATCCACGAGGTGTGATGAGAGAA GCTCTAGATGATCTCGATGATCTGAAGACTCTTGGGGAAGAAGAGGAAGA GCGGTCTCGGGTTTGGCGACTCGAAGTACCAGGTAGCTGGGTAGCCTTCC GTCGTGGCGTCCTCTCGTAGATAAGAGCTCTGGCGATGTCGTCCATATTA GGATACGTTCGCCCTCGAAGCCTAGGGTGGCATACCCCGTCGTCCTCGTC CGCGAGAGGCAACTCTGCGCGAATCATTTCTGAGCCCTGGTTCTGGCCGT GGATAATCCAGCATCTTATGATCGTTGTGATTCGTGCCTCTTGTCAGGTC GAGGATCACTACGGCTTCAAGGCTAAGGTGTACCAATGCGCGGACTGCGC CACAAAGGAAGAATTCTACGACAAGTAAGGCGCTTTCATGCTACTCCGTT TTGCGTTGTTATCGTCCATCGTCCATCCAACGCATGTACTCGAAGCAAAT ATTTGGCCGTGCACTCAGCCATTATCATGGTTCAGTACGGAGGCCGCCCG AGATAGCTTTTGGCACGGGATGTTATTGTTCAACGTACGATGGATTTAGC AGACATCCGTAGATGGTGACTGCCAAACCAGAGGCATTAAGAAGGCGACC GACGTGCACGCTCTAAGGTAACTGATGATTATACTTGAACCGCATTTTGT GAGGGCGTAGTCTGGTGGTAGTGATGTACACACGTTCCCCAGATGTACCA CACTCAAAAGCGGTATACGTCGCCGCACCTCCAGGGCAGGGCAGCACTGC ACGTAGTCTTTGTTATCCGCAAGCCTGAATGTCGCATCTCGTTGGGCGAG CTTCCGTGGGTTGGCTCGACGCGATAACCCGCCGCGTGCTTGTCTGTATA TTTTCCAAGGTACGGGGAGGACTACTGGATGGAGGACATTGACGAGTATG ACAAGAAGTGCAAGGTGGAGCCGCTCATGCGCTCCCTCAAGGAGTCCGAC ACGGAGGCGTGGATCAACGGCCGCCGCAGGGACCACGGCTTCGAGCGTGC CGCTCTACCGCTGTGGGAGGGGCAAAAGGTGAGACAGAGGGGGGTTGAAA ATGGCGCTACGGTTAGCCAGCCTTGTTGAATAGCAAAGGACGAAACCAGG CGCGGTGCGGTGCGGCGCAGTGAGTGTACGACCAAGACGGTGGTTGATTT TGTCGACCGTAAATGATTCCTACAGTTTCAGTTCACGCTGTATCTGGTGC CACACGCACGTCCCAACGCCGTCCCTTTCGACCACTTTGGACGCCCTATC TCGAACGCAAACGTGAGCGGCGATTAACGTATGTTTCCATGTCGTCGCGC GCCGCACTTTTTGTTCTCCCTCGTGTGCAGTTCAACCCGCTTGCATTCTG GTCCTTTGAGGACTGCTGGACCTACCTCCGCAAGCACAACGTGCCATACC ACCCACTTCACGATGTGGGATTCTCGTCCTTGGGCGACATGCAGAGCACT CGCAAGGTGCTGGGATGACTCTGTTCCCACCGCTGTCGTGGTAATGTGTT GGCGCTGTGGTTGAACGACATGTTTTACTCGTTATCTCCACGCTCTATCC TTCTCCGCAGCGCAGACGCTCTACCGGACCAAACGTGGGTGCACAAATAG TGGGCAGGTTTTTTCGTGGCAATTATTCGTTCTGGAGTTTCGAGAGTTTT CTGCCTTTCTCCTTCCTTGATGATCACTCGCGTTGTGGTGTGGCGTGGTA ATTTGAGCAACGAGCAATATGATTCTTGCCCACCCTCCACCCTCCAATAT CTCGTCGAGGCGACATACGAGACACCGATGTCCTGTGTCTGTTGTTTGTG TGTGTATTCATTAAATTGCACATAACCGTGCAATCCGGCTCTATACGTCA TTGTAGGCTATACGCATTGATCCTGTCTATTTGTGTGCTTGTGTTATCCG CGGTGCGCGTAGGTGCCTCTCGAAAATTGGTTCAGCTACGGCGGCGAGCG TTCCGGGCGTTTCGAGGGAATGAAGAACAAAGACGGCTCCGAGAAGACGG AGTGCGGGATACATAGCAAGTAG
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Coding sequence (CDS) from alignment at H-elongata_contig79185:56..2728-

>mRNA_H-elongata_contig79185.15578.1 ID=mRNA_H-elongata_contig79185.15578.1|Name=mRNA_H-elongata_contig79185.15578.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1416bp|location=Sequence derived from alignment at H-elongata_contig79185:56..2728- (Himanthalia elongata Himel1 dioecious)
CAGATATTCGAGAAGACTCGCATTGACTTCCTGGAGGAACAGTTGAAAGA
ATCACTCAAGGCCGTCGCTGAGCAGATATTCGAGAAGACTCGCATTGACT
TCCTGGAGGAACAGTTGAAAGAATCACTCAAGGCCGTCGCTGAGATGAAG
AAGAACCCCGTTTTTACGACGGCGCTGATTGCCGGCGATTGTGTTATCCT
CGACGCGATCGCGAAAGCTGGTCTTCTGGATAAGATCAAGGTGGTCTTCA
TCGACACATTTTTCCTCTTCCCTGAGAGCATTGACTTCATCCACGAGATG
AAGAAGAACCCCGTTTTTACGACGGCGCTGATTGCCGGCGATTGTGTTAT
CCTCGACGCGATCGCGAAAGCTGGTCTTCTGGATAAGATCAAGGTGGTCT
TCATCGACACATTTTTCCTCTTCCCTGAGAGCATTGACTTCATCCACGAG
GTCGAGGATCACTACGGCTTCAAGGCTAAGGTGTACCAATGCGCGGACTG
CGCCACAAAGGAAGAATTCTACGACAAGTCGAGGATCACTACGGCTTCAA
GGCTAAGGTGTACCAATGCGCGGACTGCGCCACAAAGGAAGAATTCTACG
ACAAGTACGGGGAGGACTACTGGATGGAGGACATTGACGAGTATGACAAG
AAGTGCAAGGTGGAGCCGCTCATGCGCTCCCTCAAGGAGTCCGACACGGA
GGCGTGGATCAACGGCCGCCGCAGGGACCACGGCTTCGAGCGTGCCGCTC
TACCGCTGTGGGAGGGGCAAAAGGTACGGGGAGGACTACTGGATGGAGGA
CATTGACGAGTATGACAAGAAGTGCAAGGTGGAGCCGCTCATGCGCTCCC
TCAAGGAGTCCGACACGGAGGCGTGGATCAACGGCCGCCGCAGGGACCAC
GGCTTCGAGCGTGCCGCTCTACCGCTGTGGGAGGGGCAAAAGTTCAACCC
GCTTGCATTCTGGTCCTTTGAGGACTGCTGGACCTACCTCCGCAAGCACA
ACGTGCCATACCACCCACTTCACGATGTGGGATTCTCGTCCTTGGGCGAC
ATGCAGAGCACTCGCAAGTTCAACCCGCTTGCATTCTGGTCCTTTGAGGA
CTGCTGGACCTACCTCCGCAAGCACAACGTGCCATACCACCCACTTCACG
ATGTGGGATTCTCGTCCTTGGGCGACATGCAGAGCACTCGCAAGGTGCCT
CTCGAAAATTGGTTCAGCTACGGCGGCGAGCGTTCCGGGCGTTTCGAGGG
AATGAAGAACAAAGACGGCTCCGAGAAGACGGAGTGCGGGATACATAGCA
AGTAGGTGCCTCTCGAAAATTGGTTCAGCTACGGCGGCGAGCGTTCCGGG
CGTTTCGAGGGAATGAAGAACAAAGACGGCTCCGAGAAGACGGAGTGCGG
GATACATAGCAAGTAG
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