prot_H-elongata_contig7916.15576.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7916.15576.1
Unique Nameprot_H-elongata_contig7916.15576.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length462
Homology
BLAST of mRNA_H-elongata_contig7916.15576.1 vs. uniprot
Match: D7G8I9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8I9_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 1.300e-95
Identity = 219/452 (48.45%), Postives = 283/452 (62.61%), Query Frame = 0
Query:    1 LLPFGDDSLNLVDARGITGVA--RTWLD--GAAAGGPGGVLTGVLAAGQIFMEKHARETVGRGPRLQM----EVVQCLRLLVTAIVATESCAMKHEARARTEAAVLTELPMLMGSGKRTWSAGWRCFTRRERARKRVKFCAFDLSTVDMPCEAIQGSEVPAREVADCLARVVDSSMILQEALQKVAPRKGRGGAAAVERQDGF-----AVWRAFLRGVRTVS-VAPVASSALVEAVKTVCLDLGGEASTDTITRAAILLLDELIPLE--RDEASVKTPLRMRLASFLSALVRFNLRMLLNPPPPRPPLSFLGLGSSA---RQVYQVIQLTTDKTKP-QKRDDYDPTRDGATSAAVSRALRRLYGYSDEGAVRVISAAEAFVEKIKTEGN--LSADDVASLTRQHSLATVDVVAAIRARGFMLELLEFPGVEEAIAEAQGWGEVERLSATLRK 430
            LLP+G +  + V A+ I   A  R+WL   G A GGP G LTGVLA  ++ M+K +    GR   LQ     E ++     +TAIVATE+CAMKHE RA TEA     +P   G+G                  K V+FCAFDLSTVDMP +AI+ S+  A+EVA CLARVV SS +LQE + K A   G  G AA     G      +V +AF+RG++TV+ VA   S  LV + +  C +LG E ST+ + RAA LLL+    LE   + A+ + PLR RLA  LSAL+RFNLR LLNPPP +  LS L +  S    R+V++VI L ++++KP  K+D +DPTRDGA SA +SRALRRLY +SD  AV V+S AEAFV  +K +       ++ AS  R HS +TVD+VAAIRAR F+LELLEFPGVE A+++A+GWGE+ERLS  LRK
Sbjct:  888 LLPYGAEVTDGVTAKDIFEAASSRSWLGDGGGADGGPRGALTGVLATARVLMQKASGP--GRASSLQSAVPPEAMRQFESFLTAIVATEACAMKHELRAGTEAG--ETVPPSAGAGVAXXXXXXXXXXXXXXXXKGVRFCAFDLSTVDMPTDAIEDSDAAAKEVAQCLARVVASSKLLQEGMPKRASGAGGAGKAAAVADGGIGGGLASVVKAFMRGLKTVAGVAEPDSCPLVASARGACRELGTEISTEVVKRAAALLLESFEALEGGAEVAATRCPLRQRLAIMLSALIRFNLRTLLNPPPHKS-LSSLHIADSTDKPRKVHEVILLVSEESKPASKKDAFDPTRDGAASAVLSRALRRLYEFSD--AVEVMSRAEAFVADMKGKNRDLYGDEEKASRARLHSQSTVDIVAAIRARNFVLELLEFPGVELAVSQARGWGELERLSTELRK 1332          
BLAST of mRNA_H-elongata_contig7916.15576.1 vs. uniprot
Match: A0A6H5LA33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA33_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 1.490e-63
Identity = 167/364 (45.88%), Postives = 222/364 (60.99%), Query Frame = 0
Query:    1 LLPFGDDSLNLVDARGITGVA--RTWL-DGAAA-GGPGGVLTGVLAAGQIFMEKHARETVGRGPRLQM----EVVQCLRLLVTAIVATESCAMKHEARARTEAAVLTELPMLMGSGKRTWSAGWRCFTRRERARKR--VKFCAFDLSTVDMPCEAIQGSEVPAREVADCLARVVDSSMILQEALQKVAPRKGRGGAAAVERQDGF-----AVWRAFLRGVRTVS-VAPVASSALVEAVKTVCLDLGGEASTDTITRAAILLLDELIPLE--RDEASVKTPLRMRLASFLSALVRFNLRMLLNPPPPRPPLSFLGLGSSA---RQVYQVIQLTTDKTKP-QKRDDYDPTRDGATSAAVSRALRRL 342
            LLP+G +  + V AR I   A  R+W+ DG+ A GGP G LTGVLA  ++ M+K +    G    LQ     E ++     +T IVATE+CAMKHE RA TEA     +P   G+G    +AG     +    +K+  V+FCAFDLSTVDMP +AI+ S+  A+EVA CLARVV SS +LQE + K A   G  G AA     G      +  +AF+RG++TV+ VA   S  LV +V+  C +LG E ST  + RAA LLL+    LE   +  + + PLR RLA  LSAL+RFNLR LLNPPP +  LS L +  S    R+V++VIQL ++++KP  K+D +DPTRDGA SA +SRALRR+
Sbjct: 1104 LLPYGAEVTDGVTARDIFEAASSRSWVGDGSGAEGGPRGALTGVLATARVLMQKASGP--GGASSLQSSVPPEAMRQFESFLTTIVATEACAMKHELRAGTEAG--ETVPPSAGAGA---AAGTVAAAKAAEGKKKKGVRFCAFDLSTVDMPTDAIEDSDAAAKEVAQCLARVVASSKLLQEGMPKRASGAGGAGKAAAVADGGIGGGLASAVKAFMRGLKTVAGVAEPDSCPLVSSVRAACRELGTEISTKVVKRAAALLLESFEALEGGAEVPATRCPLRQRLAIMLSALIRFNLRTLLNPPPHKS-LSSLHIADSTDKPRKVHEVIQLVSEESKPASKKDAFDPTRDGAASAVLSRALRRV 1459          
BLAST of mRNA_H-elongata_contig7916.15576.1 vs. uniprot
Match: D7FV49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV49_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 2.380e-40
Identity = 130/357 (36.41%), Postives = 171/357 (47.90%), Query Frame = 0
Query:  129 VKFCAFDLSTVDMPCEAIQGSEVPAREVADCLARVVDSSMILQEALQK---VAPRKGRGGAAAVERQDGFAVWRAFLRGVRTVSVAPVASSALVEAVKTVCLDLGGEAST--------DTITRAAILLLDELIPLERD-EASVKTPLRMRLASFLSALVRFNLRMLLNPPPPRPPLSFLGLGSSARQVYQVIQLTTDKTKPQKRD------DYDPTRDGATSAAVSRALRRLYGYSDEGAVRVISAAEAFVEKIKTEGNLSADDVASLTRQHSL-----ATVDVVAAIRARGFMLELLEFPGVEEAIAEAQGWGEVERLSATLRKVRDCPDADAALSLLADVQDLKRWLGTSSPWSH 462
            V+ CAF+ STV MP +   GSE+ A EV  CL  VV +   ++   ++   V    G  G  +         WRAF   VR  +                     G              + +A ++LL EL PLER  E  VK+PLR RLAS LS+L+RF+LR+ L+ PP R   +   L S     Y   +   +   P          D   T D    A+ S+AL RL G+S E AV V+SAAEAF    +T   L+  D     R  S      AT DVV A+RAR F+L LLE  GVEEAI EA GWG VE  +++L+ ++ C D D  L+LL+DV   K WL +   W H
Sbjct: 1479 VRLCAFNFSTVGMPLDTATGSELQALEVVRCLQGVVTALHKIENFHRRCNLVLKTTGGSGDESNGNSHRLVAWRAFQHEVRAAAANXXXXXXXXXXXXXXXXXXRGRQGRRPSAGMKEKEMAKAGLVLLGELEPLERSPEGLVKSPLRDRLASMLSSLIRFHLRIRLDAPPERLTRAPEALPSCGDPSYAEAKRRAEVLPPSHFSKVHTVVDVSET-DATLGASFSKALFRLEGFSCEMAVEVLSAAEAFAAADQTR--LAERDGGCPARVESAGRLLSATADVVDAVRARKFVLSLLELEGVEEAIVEAGGWGNVEMWASSLKGLKGCADIDEPLTLLSDVGAFKAWLMSKPTWGH 1832          
BLAST of mRNA_H-elongata_contig7916.15576.1 vs. uniprot
Match: A0A836CH73_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH73_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.960e-19
Identity = 141/509 (27.70%), Postives = 201/509 (39.49%), Query Frame = 0
Query:    1 LLPFGDDSLNLVDARGITGVARTWLDGAAAGGPGGVLTGVLAAGQIFMEKHARETVGRGPRLQMEVVQCLRLLVTAIVATESCAMKHEARARTEAAVLTELPMLMGSGKRTWSAGWRCFTRRERARKRVKFCAFDLSTVDMPCEAIQGSEVPAREVADCLARVVDSSMILQEALQKVAPRKGRGGAAAVERQDGFAVWRAFLRGVRTVS--------------VAPVASSALVEAV-KTVCLDLGGEASTDTITRAAILLLDELIPLERDEASVKTP-----------------LRMRLASFLSALVRFNLRMLLNPPPPRPPLSF----------LGLGSSARQV----YQVIQLTTDKTKPQKRDDYDPTRDGATSAAVSRALRRLYGYSDEGAVRVISAAEAFVEK-----------------------IKTEGNLSADDVASLTRQHSLATVDVVAAIRARGFMLELLEFPGVEEAIAEAQGWGEVERLSATLRKVRDCPDADAA 440
            L+PF     + + A  +   AR W        PG V+  VLAA     E+      G G      + + L  L  A+VA E+ A+  +A +   AA     PM                        RV FCA+DLST+D PC+A   S      VA  L  V   SM L  A+       G GG+ + E         A L+G+ TV+              V P+  S  ++AV +  C D+G  A        A LLL E+  L    ++   P                 LR RL   LS+ +RF+LR LLN PP  P  +              GSSA  V    +Q+++L         R       + A S+ +++AL  L+      A R ++AAEAF+++                        K  G   ++  A+L     ++ V   AA  A  F+L L+++PG  EAIA A GWG VE L++ L  V     A AA
Sbjct:  312 LVPFSASVTSAITATAVCECARRWFGDTHV--PGCVMPVVLAAAHCLAERS-----GGGXXGTSRMCEPLLPLFKALVALEAAAVLGDAASGATAASSAR-PM------------------------RVLFCAYDLSTIDPPCDARPDSAQHVEAVALLLMAVRRESMALCRAM-------GHGGSTSRELP-----MLALLQGLATVARAAGTGSAATAGKAVLPLEQSGALKAVVEQACRDIGTAACARYAGGCATLLLAEISCLHMQVSAGGAPGDAQAQLSGPGVSSESFLRRRLLEILSSALRFHLRRLLNAPPQSPTAATDMERAGVALRAAAGSSAAAVRSAVWQLVRLA--------RASDGAADESALSSVLTQALAMLWHAQRGAAQRSVAAAEAFLQQRGGGATAPAAQVRSTKAARPARVTKAGGGARSEYEAALVHLEHVSGVQGAAA--ASTFVLSLMDWPGAAEAIAVAGGWGPVETLASQLADVCGGETAGAA 766          
BLAST of mRNA_H-elongata_contig7916.15576.1 vs. uniprot
Match: A0A7S1VYI4_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VYI4_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 5.490e-6
Identity = 52/179 (29.05%), Postives = 79/179 (44.13%), Query Frame = 0
Query:  261 TPLRMRLASFLSALVRFNLRMLLNPPP-----PRPPLSFLGLGSSARQVYQVIQLTTDKTKPQKRDDYDPTRDGATSAAVSRALRRLYGYSDEGAVRVISAAEAFVEKI----KTEGNLSADDVASLTRQHSL--ATVDV------VAAIRARGFMLELLEFPGVEEAIAEAQGWGEVE 422
            +PLR RL  F+ + +RF LR   NP P     P        L  +   V++++++         RD      DG+ S+  S ALR++Y +      +      +FV +      +   L   D   +   H L    VD+      +A  RA  FM +LL +PGV EAI  + GWG+VE
Sbjct:  825 SPLRRRLGEFIGSAIRFYLRRFFNPVPLPLTTPSKAFPPKDLSFARSSVHEIVEMAVTGGNS-GRDT--AVADGSISSVFSSALRQIYDFYQFNKEKQKEGTGSFVTEFCVRQASRRGLGTKDSPIVLSDHDLNEILVDIDEAHISLAGARACKFMHDLLNWPGVTEAIQNSGGWGKVE 1000          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7916.15576.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G8I9_ECTSI1.300e-9548.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LA33_9PHAE1.490e-6345.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV49_ECTSI2.380e-4036.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CH73_9STRA1.960e-1927.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1VYI4_9STRA5.490e-629.05Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7916contigH-elongata_contig7916:4825..9594 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7916.15576.1mRNA_H-elongata_contig7916.15576.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7916 4825..9594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7916.15576.1 ID=prot_H-elongata_contig7916.15576.1|Name=mRNA_H-elongata_contig7916.15576.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=462bp
LLPFGDDSLNLVDARGITGVARTWLDGAAAGGPGGVLTGVLAAGQIFMEK
HARETVGRGPRLQMEVVQCLRLLVTAIVATESCAMKHEARARTEAAVLTE
LPMLMGSGKRTWSAGWRCFTRRERARKRVKFCAFDLSTVDMPCEAIQGSE
VPAREVADCLARVVDSSMILQEALQKVAPRKGRGGAAAVERQDGFAVWRA
FLRGVRTVSVAPVASSALVEAVKTVCLDLGGEASTDTITRAAILLLDELI
PLERDEASVKTPLRMRLASFLSALVRFNLRMLLNPPPPRPPLSFLGLGSS
ARQVYQVIQLTTDKTKPQKRDDYDPTRDGATSAAVSRALRRLYGYSDEGA
VRVISAAEAFVEKIKTEGNLSADDVASLTRQHSLATVDVVAAIRARGFML
ELLEFPGVEEAIAEAQGWGEVERLSATLRKVRDCPDADAALSLLADVQDL
KRWLGTSSPWSH
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