prot_H-elongata_contig79140.15573.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig79140.15573.1
Unique Nameprot_H-elongata_contig79140.15573.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length347
Homology
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 343 bits (879), Expect = 2.520e-106
Identity = 192/437 (43.94%), Postives = 249/437 (56.98%), Query Frame = 0
Query:    5 RWVNTIKADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLAIAVE-----------------LAYEIYMMGY-----------------------DPCMYIYEDEVGFVFLTLYVDNLLVQGANKE--------------------------------------------YTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDF 344
            +WV   KADGTF+ R+V +GW+QVPG+D G T+ PVCR+QS+RM+  I V+                 L   +Y +                         DPC+Y+Y+     ++LTLYVD+LL+ G + +                                            Y  +I ERFGM+G  P  TPG    +S  QPE+ LLDEK+ ++YQ I G++M +AQV RYDI++A  QLAR M+KPSK HM AAKH LRYLAGT             L  +SD+N  NN DNGK T SY+ MLA  P+SF+ GLQ L A STMEAELVA+AL MKEAV CS+MM ELGF K F  +P+Y DNT+TLH  GNR++S R KHIALR+ F++E V EG I+IHYV T+D LA++GTKH   HR    +  +N+F
Sbjct:  559 KWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVDFNLIFDQMDDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLMDLINNF 995          
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 334 bits (856), Expect = 5.640e-105
Identity = 190/429 (44.29%), Postives = 256/429 (59.67%), Query Frame = 0
Query:    1 VVGIRWVNTIKADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLAIAVELAYEIYMM---------------------GY----------------------------------------------DPCMYIYEDEVGFVFLTLYVDNLLV--QGANKE---YTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDF 344
            V+G +WV  +K + T ++RLV +GW+QVPG D GGTF PVCRLQSIRM+ AIA E   ++  +                     GY                                              D C+YIY+     V LTLYVD+LL+   GA+ +   YT +I +RFGM  C P  T G  P LS+ QPEE LL+ +  +RYQ+I G+VM LAQV+RYDI++  +Q ARAMS PSK HMGAAKHLLRYL+G+             L A S+AN G+N DNGK   SYI+M++  P S K GLQSL A ST+EAELVA+AL MKE + C++MM ELGF   F+S PL++D+T+TL+V GN+T+S   KH+ALR+ ++++ V+EG I+IHY+ T+D LA++GT++L K RH   I  + +F
Sbjct:  348 VIGSKWVFKVKPENTHKARLVAKGWNQVPGRDCGGTFAPVCRLQSIRMVFAIAAEKDLDVIQLDVKTAFLYADIEENVFVEMAPGYEAKNMEELQLVMKLEKSLDGLAQSPQDWLKTIDSSLVEIGFFPLKSDTCVYIYDHNNTVVVLTLYVDDLLIIRGGAHHQPGNYTTSILDRFGMGSCKPLSTAGFGPELSVKQPEETLLNAEGKQRYQAIIGSVMYLAQVTRYDIMYCASQFARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYIPTEDNLADIGTEYLNKQRHQYLIDKIKNF 776          
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 2.450e-103
Identity = 196/484 (40.50%), Postives = 257/484 (53.10%), Query Frame = 0
Query:    5 RWVNTIKADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLAIAVE------------------LAYEIYM--------------------------------------------MGY-----DPCMYIYEDEVGFVFLTLYVDNLLVQGANKE---------------------------------------------------------YTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHR--HLARI---KPLNDFKA 346
            +WV   KADGTF+ R+V +GW+QVPG+D G T+ PVCR+QS+RM+  I VE                  +  E+++                                            +G+     DPC+Y+Y+     ++LTLYVD+LL+ G + +                                                         Y  +I ERFGM+G  P  TPG    +S  QPE+ LLDEK+ ++YQ I G++M +AQV RYDI++A  QLAR+M+KPSK HM AAKH LRYLAGT             L  +SD+N  NN DNGK T SY+ MLA  P+SF+ GLQ L A STMEAELVA+AL MKEAV CS+MM ELG  K F  +P+Y DNT+TLH  GNR++S R KHIALR+ F++E V EG I+IHYV T+D LA++GTKH  KHR  HL  +     +N+F A
Sbjct:  180 KWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKRFKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNLDVNEFTA 663          
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 1.110e-97
Identity = 190/464 (40.95%), Postives = 252/464 (54.31%), Query Frame = 0
Query:    5 RWVNTIKADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLAIAVE------------------LAYEIYM--------------------------------------------MGY-----DPCMYIYEDEVGFVFLTLYVDNLLVQGANKE--------------------------------------------YTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDF 344
            +WV   KADGTF+ R+V +GW+QVPG+D G T+ PVCR+QS+RM+  I VE                  +  E+++                                            +G+     DPC+Y+Y+     ++LTLYVD+LL+ G + +                                            Y  +I ERFG++G  P  TPG    +S  QPE+ LLDEK+ ++YQ I G++M +AQV RYDI++A  QLAR M+KPSK HM AAKH LRYLAGT             L  +SD+N  NN DNGK T SY+ +LA  P+SF+ GLQ L A STMEAELVA+AL M EAV  S+MM ELGF K F  +P+Y DNT+TLH  GNR++S R KHIALR+ F++E V EG I+IHYV T+D LA++GTKH  KHR    +  +N+F
Sbjct: 1201 KWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNF 1664          
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 297 bits (760), Expect = 2.170e-94
Identity = 161/336 (47.92%), Postives = 205/336 (61.01%), Query Frame = 0
Query:   66 DPCMYIYEDEVGFVFLTLYVDNLLVQGANKE--------------------------------------------YTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDF 344
            DPC+Y+Y+     ++LTLYVD+LL+ G + +                                            Y  +I ERFGM+G  P  TPG    +S  QPE+ LLDEK+ ++YQ I G++M +AQV RYDI++A  QLAR M+KPSK HM AAKH LRYLAGT             L  +SD+N  NN DNGK T SY+ MLA  P+SF+ GLQ L A STMEAELVA+AL MKEAV CS+MM ELGF K F  +P+Y DNT+TLH  GNR++S R KHIALR+ F++E V EG I+IHY  T+D LA++GTKH  KHR    +  +N+F
Sbjct:  100 DPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLMDLINNF 435          
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 293 bits (749), Expect = 1.630e-87
Identity = 163/327 (49.85%), Postives = 211/327 (64.53%), Query Frame = 0
Query:   25 WSQVPGIDYGGTFTPVCRLQSIRMMLAIAVELAYEIYMMGYDPCMYIYEDEVGFVFLTLYVDNLLVQGANKEYTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARI 338
            W+QVPG D+GGTF PVCRLQSIRM+LAIA E   ++  +         + +  F++  +  D  L   + + Y ++I +RFGM    P  T G  P LS                  +I G+V+ LAQ++RYDI++  +QLARAMS PSK HMGAAKHLLRYL+G+             L A SDAN GNN DN K   SYI+M++  PVSFK GLQSL A ST+EAELVAAAL MKE + C++MM ELGF   F S PLY+ NT+TLHV GN+T+S R KH+ALR+ +++E V+EG I+IHY+ T+D LA++GTKHL K RH   I
Sbjct:  385 WNQVPGRDWGGTFAPVCRLQSIRMLLAIAAEKDLDVIQL---------DVKTAFLYADIEEDGELTN-SQENYPNSILDRFGMGSWKPLSTAGFGPELS------------------AIIGSVIYLAQITRYDIMYCASQLARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTALSDANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGFGSEFRSAPLYI-NTATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTKHLNKQRHQCLI 682          
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE)

HSP 1 Score: 268 bits (686), Expect = 3.230e-80
Identity = 138/267 (51.69%), Postives = 179/267 (67.04%), Query Frame = 0
Query:   93 ANKEYTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDFKA 346
            + + Y+ +I +RFGM+ C P  TPG+ P  S  QPEE LL++++ +RYQ I G ++ L+Q+ RYDI++A +QLAR M+KPSK HMGAAK   RYLAGT             L A++D+N GNN DNGK T S++ ML   P++FK GLQSL  QSTME ELVAAAL +KEAV CS+++ ELGF K    VPLY DNT+TLH  GNR+YS   KHIALR+ F++E V EG I IHYV      A++GTKHL K R    +  + +F  
Sbjct:  454 SREAYSKSILDRFGMSACKPTSTPGLGPGPSNVQPEETLLNQEETRRYQGIVGCLIYLSQILRYDIMYATSQLARPMAKPSKNHMGAAKRTFRYLAGTTYFKIPYKRGGFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYVPADSNPADIGTKHLNKDRFQLLLNIIKNFNV 720          
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5J6N1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6N1_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 2.220e-79
Identity = 163/375 (43.47%), Postives = 207/375 (55.20%), Query Frame = 0
Query:    4 IRWVNTIKADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLAIAVELAYE------IYMMGYDP-----CMYIYEDEVGFVFLTLYVDNLLVQGANKE--------------------------------------------YTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLR--------YLAG--TLVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIH 313
            I+ +  +K D T+++RLV  GW+QVP  D GGTF PVCRLQS+RM+ AIA E+ +E      +  +G +P     C+YIY+     V +TLYVD+L+V G N E                                            YT +I  RFGM  C P   P V   LS  QP E +L+++  +                        +QLAR MSK +KAHMGAAKHLLR        Y  G   L A+SDAN  +N DN + T SY++M++  PVSFK GLQ L   STMEAEL+AAALTMKEAV CS+MM ELGF + F  VPLY++NT+TLHV GN+ YS R KHIAL +  V+E V+EG ITIH
Sbjct:  150 IKSLQELKRDCTYKARLVALGWNQVPEKDCGGTFAPVCRLQSVRMVFAIAAEMDWEKTIDLKLIELGCNPLKSDSCVYIYKRNHTIVIITLYVDDLVVIGGNIEVIEAIKTKLMEQFQMSVLGNVSLVLGMQVTRDGEHGTLTITQADYTRSILARFGMEECKPTSIPSVGSELSTEQPTETVLNKEKTQ------------------------SQLARVMSKAAKAHMGAAKHLLRGTQDFCITYKRGGFKLTAFSDANWESNPDNARSTSSYMIMMSKAPVSFKTGLQDLTVMSTMEAELLAAALTMKEAVFCSNMMTELGFGQQFGQVPLYINNTATLHVIGNQAYSSRTKHIALLFFCVRELVKEGAITIH 500          
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 7.260e-70
Identity = 118/210 (56.19%), Postives = 144/210 (68.57%), Query Frame = 0
Query:  148 MNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDF 344
            M +AQV RYDI++A   LAR M+KPSK H   AK  LRYLAGT             L  +SD+N  NN DNGK T SY+ MLA  P+SF+ GLQ L A STMEAELVA+AL MKEAV CS+MM ELGF K F  +P+Y DNT+TLH  GNR++S R KHIALR+ F++E V EG I+IHY  T+D LA++GTKH  KHR    +  +N+F
Sbjct:    1 MYIAQVLRYDIMYATGHLARPMAKPSKVHTVTAKQTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYAPTEDNLAHIGTKHFNKHRFKHLMDRINNF 210          
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 8.860e-65
Identity = 154/379 (40.63%), Postives = 200/379 (52.77%), Query Frame = 0
Query:   11 KADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLAIAVELAYEIYMM------------------------------GY-----DPCMYIYEDEVGFVFLTLYVDNLLVQGANKEYT-----DNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGTLVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKH--RHLARIKP---LNDF 344
            KADG+F+ RLV +GW+QVPG+D+G T+ PVCRLQSI+M+  IAV+   E+  M                              G+     D C+Y+Y+ +   V+LTLYV  LL+  +NK          +++RF  T    A        L L         E      + I G +M +AQV RYDII                          +  GT   +SD N  NN DNGK T  Y  ML + PVS K G+Q   A STMEAEL+A+AL MKEAV CS+M+ ELGF K F  VPLY DNT+TLH  GNR++S R  HIALR+ +++E V EG I+IHYV T   LA++GTK+L KH  +HL  I     +NDF
Sbjct:  857 KADGSFKGRLVAQGWNQVPGLDWGSTYAPVCRLQSIQMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDRGFVPLKSDTCVYLYDHDDVQVYLTLYVYELLL-ASNKSNAISMIKKKLKQRFKSTDIGEA-------KLVLGM-------EIKGTATKGIVGCLMYIAQVLRYDIIITYKSEG-------------------FKLGT---FSDTNWANNPDNGKSTSCYWTMLEHAPVSLKSGIQGPAAISTMEAELIASALAMKEAVFCSNMLTELGFGKEFAQVPLYCDNTATLHALGNRSFSSRENHIALRFFYIRELVLEGRISIHYVPTDSNLADIGTKYLNKHWLKHLLDIISSFNVNDF 1198          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNH5_9PHAE2.520e-10643.94Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L6R7_9PHAE5.640e-10544.29Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JME8_9PHAE2.450e-10340.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJH6_9PHAE1.110e-9740.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5U2_9PHAE2.170e-9447.92Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KBU1_9PHAE1.630e-8749.85CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JG39_9PHAE3.230e-8051.69Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J6N1_9PHAE2.220e-7943.47Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KMK0_9PHAE7.260e-7056.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBV6_9PHAE8.860e-6540.63Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..64
e-value: 4.9E-15
score: 55.8
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 81..307
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 81..307

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79140contigH-elongata_contig79140:30..1440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79140.15573.1mRNA_H-elongata_contig79140.15573.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig79140 30..1440 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig79140.15573.1 ID=prot_H-elongata_contig79140.15573.1|Name=mRNA_H-elongata_contig79140.15573.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=347bp
VVGIRWVNTIKADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMML
AIAVELAYEIYMMGYDPCMYIYEDEVGFVFLTLYVDNLLVQGANKEYTDN
IRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNL
AQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGTLVAYSDANLG
NNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEA
VLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVF
VQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDFKA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like