prot_H-elongata_contig7914.15572.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7914.15572.1
Unique Nameprot_H-elongata_contig7914.15572.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length215
Homology
BLAST of mRNA_H-elongata_contig7914.15572.1 vs. uniprot
Match: A0A6H5KZ26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ26_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 2.370e-46
Identity = 104/250 (41.60%), Postives = 133/250 (53.20%), Query Frame = 0
Query:    1 MMFDKDDDLYDSGMDENDARWVRKQHRPAAEYDGEPSAKGLESDHRPLDGDNSRNIRILPEVTENVDVHGD----------------DG-----GHRQQEKGKSKGKGKVVDDLGVESDAQLSCPLCFTTVCLECQRHVRYHNQFRAVTGINVTVKGNESLTFEDISGEGGKRSKRNGAGGRNXXXXXXXXGQGEXXG----------DREGG-----LFHSVCCAECDHRVGVLDEEDVFHFFGVIAMG 214
            + FDKDDDLY   +DE DARWVRKQH PA E + E        D  P  G  ++ I     + ++ ++H D                DG       ++Q+ G S  + +    +GV SDAQLSCPLCFTTVCLECQRH +Y+NQFRAVTGINV +  +  LT +D+S EGG   ++    G           +    G          D EGG     +FH V C ECDHRVGV D ++VFHFFGV+A G
Sbjct:   28 LRFDKDDDLYAEDLDEEDARWVRKQHLPATECEAEAE------DGNPPAGVKNK-IGKGEAINDDKEIHEDEIAEDQPPTISDSDIGDGRPXXXAQKRQQGGSSNNQRRA---MGVASDAQLSCPLCFTTVCLECQRHAKYYNQFRAVTGINVNINYDVFLTLDDVS-EGGSVQRKGRRKGHGKTPAVASVPRDSGGGVDRQNQTAQVDAEGGEEEQEMFHPVSCGECDHRVGVYDVDEVFHFFGVVASG 266          
BLAST of mRNA_H-elongata_contig7914.15572.1 vs. uniprot
Match: D8LQE6_ECTSI (E2f-associated phosphoprotein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE6_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 3.380e-40
Identity = 101/253 (39.92%), Postives = 121/253 (47.83%), Query Frame = 0
Query:    1 MMFDKDDDLYDSGMDENDARWVRKQHRPAAEY----DGEP--SAKGLESDHRPLDGDNSRNIRIL----PEVTENVDVHGDDGGHRQ--QEKGKSKGKGKVVDDLGVESDAQLSCPLCFTTVCLECQRHVRYHNQFRAVTGINVTVKGNESLTFEDISGEGGKR---------------------------SKRNGAGGRNXXXXXXXXGQGEXXGDREGGLFHSVCCAECDHRVGVLDEEDVFHFFGVIAMG 214
            + FDKDDDLY   +DE DARWVRKQH PA E     DG P    K        ++GD   +   +    P    + D+   DGG     Q              +GV SDAQLSCPLCFTTVCLECQRH +Y+NQFRAVTGINV +  +  LT +D+SG                                 +RN                GE   + E   FH V C ECDHRVGV D ++VFHFFGV+A G
Sbjct:   28 LRFDKDDDLYAEDLDEEDARWVRKQHLPATECEEAEDGNPPTGVKNKIGKGEAINGDKEIDEDEIAEDQPPTISDSDIG--DGGPPAGAQXXXXXXSSNNQRGPMGVASDAQLSCPLCFTTVCLECQRHAKYYNQFRAVTGINVNINYDVFLTLDDVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDRRN----------QSAQVDGEDR-EEEQETFHPVSCGECDHRVGVYDVDEVFHFFGVVASG 267          
BLAST of mRNA_H-elongata_contig7914.15572.1 vs. uniprot
Match: A0A0E0K2R9_ORYPU (Uncharacterized protein n=1 Tax=Oryza punctata TaxID=4537 RepID=A0A0E0K2R9_ORYPU)

HSP 1 Score: 94.4 bits (233), Expect = 2.200e-20
Identity = 52/119 (43.70%), Postives = 66/119 (55.46%), Query Frame = 0
Query:   94 GVESDAQLSCPLCFTTVCLECQRHVRYHNQFRAVTGINVTVKGNESLTFEDISGEG-GKRSKRNGAGGRNXXXXXXXXGQGEXXGDREGGLFHSVCCAECDHRVGVLDEEDVFHFFGVI 211
            G  SDA LSCP CFTT+CL+CQRH  Y NQ+RA+   N  VK ++ L       EG GKR  R G                   G+++G ++H VCC  C   VGV DE++V+HFF VI
Sbjct:   96 GRSSDAVLSCPACFTTLCLDCQRHETYVNQYRAMFVRNCKVKTDQILR------EGKGKRKNRKGK---------AADSSATSEGEKKGAVYHPVCCEVCSTEVGVFDEDEVYHFFNVI 199          
BLAST of mRNA_H-elongata_contig7914.15572.1 vs. uniprot
Match: B8AFT3_ORYSI (Uncharacterized protein n=7 Tax=Oryzinae TaxID=1648021 RepID=B8AFT3_ORYSI)

HSP 1 Score: 93.2 bits (230), Expect = 2.640e-20
Identity = 52/119 (43.70%), Postives = 66/119 (55.46%), Query Frame = 0
Query:   94 GVESDAQLSCPLCFTTVCLECQRHVRYHNQFRAVTGINVTVKGNESLTFEDISGEG-GKRSKRNGAGGRNXXXXXXXXGQGEXXGDREGGLFHSVCCAECDHRVGVLDEEDVFHFFGVI 211
            G  SDA LSCP CFTT+CL+CQRH  Y NQ+RA+   N  VK ++ L       EG GKR  R G                   G+++G ++H VCC  C   VGV DE++V+HFF VI
Sbjct:   61 GRTSDAVLSCPACFTTLCLDCQRHETYVNQYRAMFVRNCKVKTDQILR------EGKGKRKNRKGK---------AADSSTTSEGEKKGAVYHPVCCEVCSTEVGVFDEDEVYHFFNVI 164          
BLAST of mRNA_H-elongata_contig7914.15572.1 vs. uniprot
Match: UPI0007EF7A7E (E2F-associated phosphoprotein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF7A7E)

HSP 1 Score: 92.8 bits (229), Expect = 2.880e-20
Identity = 50/118 (42.37%), Postives = 63/118 (53.39%), Query Frame = 0
Query:   94 GVESDAQLSCPLCFTTVCLECQRHVRYHNQFRAVTGINVTVKGNESLTFEDISGEGGKRSKRNGAGGRNXXXXXXXXGQGEXXGDREGGLFHSVCCAECDHRVGVLDEEDVFHFFGVI 211
            G  SDA LSCP CF+T+CLECQRH +Y  Q+RAV   N  +K N+ +    I  + GKR K                G  E      G  F  VCC+ C   VGV+DEE+V+HFF V+
Sbjct:   54 GQYSDAVLSCPACFSTLCLECQRHEKYVTQYRAVFVTNCKIK-NDLVAQPGIKRKRGKRGK----------------GSSETDAGSAGETFKQVCCSTCSTEVGVIDEEEVYHFFNVL 154          
BLAST of mRNA_H-elongata_contig7914.15572.1 vs. uniprot
Match: A0A833V3H2_9POAL (E2F-associated phosphoprotein n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833V3H2_9POAL)

HSP 1 Score: 92.8 bits (229), Expect = 3.810e-20
Identity = 54/129 (41.86%), Postives = 72/129 (55.81%), Query Frame = 0
Query:   90 VDDLGVE-------SDAQLSCPLCFTTVCLECQRHVRYHNQFRAVTGINVTVKGNESLTFEDISGEGGKRSKRNGAGGRNXXXXXXXXGQGEXXGDREGGLFHSVCCAECDHRVGVLDEEDVFHFFGVI 211
            VD+L V        SDA LSCP CFTT+CL+ QRH +Y  Q+RA+   N TV+ ++ L      G+  K+SKR     +         G  E   D +G ++  VCC+ C   VGVLDEE+V+HFF VI
Sbjct:   46 VDELWVNKQRKSRSSDAVLSCPACFTTLCLDSQRHEKYVTQYRAMFVRNCTVRTDQILR----EGKQQKKSKR-----KRKTNAGPDLGSSEPKDDAQGLIYRPVCCSVCSTEVGVLDEEEVYHFFNVI 165          
BLAST of mRNA_H-elongata_contig7914.15572.1 vs. uniprot
Match: A0A1R3KG29_COCAP (E2F-associated phosphoprotein n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3KG29_COCAP)

HSP 1 Score: 92.8 bits (229), Expect = 4.000e-20
Identity = 50/129 (38.76%), Postives = 70/129 (54.26%), Query Frame = 0
Query:   83 SKGKGKVVDDLGVESDAQLSCPLCFTTVCLECQRHVRYHNQFRAVTGINVTVKGNESLTFEDISGEGGKRSKRNGAGGRNXXXXXXXXGQGEXXGDREGGLFHSVCCAECDHRVGVLDEEDVFHFFGVI 211
            +K KG++       SDA LSCP CFTT+CLECQRH +Y  Q+RA+  +N  +  NE++  E +    GKR +                 +    G   G  F SVCC+ C   VGV+DE++V+HFF V+
Sbjct:   62 NKRKGRI-------SDAVLSCPACFTTLCLECQRHEKYLTQYRAIFVVNCKID-NENVRQERVKSNKGKRRRET---------------KDNEAGAAGGETFKSVCCSVCSTEVGVIDEDEVYHFFNVL 167          
BLAST of mRNA_H-elongata_contig7914.15572.1 vs. uniprot
Match: A0A175YPP2_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A175YPP2_DAUCS)

HSP 1 Score: 92.8 bits (229), Expect = 4.860e-20
Identity = 50/118 (42.37%), Postives = 63/118 (53.39%), Query Frame = 0
Query:   94 GVESDAQLSCPLCFTTVCLECQRHVRYHNQFRAVTGINVTVKGNESLTFEDISGEGGKRSKRNGAGGRNXXXXXXXXGQGEXXGDREGGLFHSVCCAECDHRVGVLDEEDVFHFFGVI 211
            G  SDA LSCP CF+T+CLECQRH +Y  Q+RAV   N  +K N+ +    I  + GKR K                G  E      G  F  VCC+ C   VGV+DEE+V+HFF V+
Sbjct:   52 GQYSDAVLSCPACFSTLCLECQRHEKYVTQYRAVFVTNCKIK-NDLVAQPGIKRKRGKRGK----------------GSSETDAGSAGETFKQVCCSTCSTEVGVIDEEEVYHFFNVL 152          
BLAST of mRNA_H-elongata_contig7914.15572.1 vs. uniprot
Match: W1PMW7_AMBTC (Uncharacterized protein n=3 Tax=Amborella trichopoda TaxID=13333 RepID=W1PMW7_AMBTC)

HSP 1 Score: 91.7 bits (226), Expect = 6.530e-20
Identity = 49/120 (40.83%), Postives = 68/120 (56.67%), Query Frame = 0
Query:   94 GVESDAQLSCPLCFTTVCLECQRHVRYHNQFRAVTGINVTVKGNESLTFEDISGEGGKRSKRNGAGGRNXXXXXXXXGQGEXX-GDREGGLFHSVCCAECDHRVGVLDEEDVFHFFGVIA 212
            G  SDA LSCP CFTT+CL+CQRH RY  Q+RA+   N T+K N+ L    +S     ++K     G+N          GE    D E  +F  VCC+ C   V V+D+++V+HFF ++A
Sbjct:   37 GRVSDAVLSCPACFTTLCLDCQRHERYLTQYRAMFVRNCTIKTNQILHSPSVSKRKQAKAKEKIKDGKN---------SGEPSENDEEDEIFRPVCCSICKTEVAVMDKDEVYHFFNILA 147          
BLAST of mRNA_H-elongata_contig7914.15572.1 vs. uniprot
Match: A0A834YN18_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834YN18_9MAGN)

HSP 1 Score: 92.0 bits (227), Expect = 9.590e-20
Identity = 48/119 (40.34%), Postives = 65/119 (54.62%), Query Frame = 0
Query:   94 GVESDAQLSCPLCFTTVCLECQRHVRYHNQFRAVTGINVTVKGNESLTFEDISGEGGKRSKRNGAGGRNXXXXXXXXGQGEXXGDREGG-LFHSVCCAECDHRVGVLDEEDVFHFFGVI 211
            G  SDA LSCP CFT++CLECQRH +Y  Q+RA+  +N  VK  + L   +     GKR + +                GE     EGG  F  VCC+ C   VG++DE++V+HFF V+
Sbjct:   73 GHTSDAVLSCPACFTSLCLECQRHEKYVTQYRAIFVVNCKVKSEKVLRQRNQKPRKGKRGRDS----------------GESEAGPEGGETFRPVCCSVCSTEVGIIDEDEVYHFFNVL 175          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7914.15572.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZ26_9PHAE2.370e-4641.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQE6_ECTSI3.380e-4039.92E2f-associated phosphoprotein n=1 Tax=Ectocarpus s... [more]
A0A0E0K2R9_ORYPU2.200e-2043.70Uncharacterized protein n=1 Tax=Oryza punctata Tax... [more]
B8AFT3_ORYSI2.640e-2043.70Uncharacterized protein n=7 Tax=Oryzinae TaxID=164... [more]
UPI0007EF7A7E2.880e-2042.37E2F-associated phosphoprotein n=1 Tax=Daucus carot... [more]
A0A833V3H2_9POAL3.810e-2041.86E2F-associated phosphoprotein n=1 Tax=Carex little... [more]
A0A1R3KG29_COCAP4.000e-2038.76E2F-associated phosphoprotein n=2 Tax=Corchorus Ta... [more]
A0A175YPP2_DAUCS4.860e-2042.37Uncharacterized protein n=1 Tax=Daucus carota subs... [more]
W1PMW7_AMBTC6.530e-2040.83Uncharacterized protein n=3 Tax=Amborella trichopo... [more]
A0A834YN18_9MAGN9.590e-2040.34Uncharacterized protein n=1 Tax=Tetracentron sinen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019370E2F-associated phosphoproteinPFAMPF10238Eapp_Ccoord: 9..212
e-value: 1.3E-39
score: 135.6
IPR019370E2F-associated phosphoproteinPANTHERPTHR15967UNCHARACTERIZEDcoord: 6..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7914contigH-elongata_contig7914:7603..9764 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7914.15572.1mRNA_H-elongata_contig7914.15572.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7914 7544..9888 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7914.15572.1 ID=prot_H-elongata_contig7914.15572.1|Name=mRNA_H-elongata_contig7914.15572.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=215bp
MMFDKDDDLYDSGMDENDARWVRKQHRPAAEYDGEPSAKGLESDHRPLDG
DNSRNIRILPEVTENVDVHGDDGGHRQQEKGKSKGKGKVVDDLGVESDAQ
LSCPLCFTTVCLECQRHVRYHNQFRAVTGINVTVKGNESLTFEDISGEGG
KRSKRNGAGGRNGGRRQQSAGQGEGGGDREGGLFHSVCCAECDHRVGVLD
EEDVFHFFGVIAMG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019370E2F-assoc_phosphoprotein