mRNA_H-elongata_contig7914.15571.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig7914.15571.1
Unique NamemRNA_H-elongata_contig7914.15571.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig7914.15571.1 vs. uniprot
Match: D8LQE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE5_ECTSI)

HSP 1 Score: 533 bits (1374), Expect = 3.310e-185
Identity = 272/443 (61.40%), Postives = 321/443 (72.46%), Query Frame = 1
Query:  157 MPNTKLATRALMAASASLRAPWVATLEIRGNVINGGSR--------SLTRSFICSGSLPRLAANLLTQSEGLHLGGAAFFHKKVTTNASSGVVVRCDTDLRTTD-SKTSNDGVSVLAVNGAAVLSREEWKARAEAHQIRVRALTNGSVHHDHNDPIFNFLFEYYRFKPRMLLQWTPGFGVCLRDADPSEREGCPLPQKAWEPEPGGGGCYTPLGIDAKRRPNIEWIRDFLEKTSARAPVLHCFGLHEWAMLYRPPGAEE---DVRRLYQALPLRVSQEEINEMVEGKGGAMGCTHFDAFRFFTPEARPLNPIQLDRESQRLHDQPGCIHVNMDLFKWALKLWPLLPSEEMADILELAVACRVLDMRASPYDLTAHGKAKDGEVGEGGGKVGSLPPEMWDPSPVRIETEDGRKEYQQAQLELYRRSMPIRRSLLSYIDRLLEVW 1449
            M + +   RALMA S  LRAPW  +L ++   IN   R           RS  C G                  G  A   + V T +    V+    D+R  D SK++ +GV V   +   VLSRE W ARAEAH+ RVR+LTNGSVHHD +DPIFNFLFEYY FKPRMLLQWTPGF   L DADPS + GCPLPQKAWE  PG GG Y P G+D  RR  ++W+RD L+ T++RAPVLHCFGLHEWAMLYRP GAEE   D R ++Q LPLRVSQ+EIN MVEG+GGA+ CTHFDAFRFFTPEA+PLNP+QL+R  QR +DQPGC+H NMDLFKWAL+LWPLLPSE++A+ LELAV+CR+LDMRASPYDLTAHGK  D  VG GGG+VG LPPE WDP+PVRIETE+GRKEYQQAQ ELY+RSMP+RRSL+ ++DRLL+VW
Sbjct:    1 MSSARRLARALMAVSTFLRAPWGVSLAVKAT-INARPRPPGASTWSGYHRSSSCGGR-----------------GVTAVRQRAVATGSGEAAVLSEPVDVRVEDASKSAAEGVEV---SQREVLSREAWMARAEAHRKRVRSLTNGSVHHDKSDPIFNFLFEYYHFKPRMLLQWTPGFDAYLLDADPSLK-GCPLPQKAWESGPGAGGSYNPFGLDNNRRVQVQWMRDLLQATTSRAPVLHCFGLHEWAMLYRPRGAEEAGIDARSVHQTLPLRVSQDEINAMVEGRGGALACTHFDAFRFFTPEAKPLNPVQLERVGQRSNDQPGCVHANMDLFKWALRLWPLLPSEKLANALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGRVGGLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDVW 421          
BLAST of mRNA_H-elongata_contig7914.15571.1 vs. uniprot
Match: A0A7S0D3Z9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D3Z9_9EUKA)

HSP 1 Score: 263 bits (672), Expect = 6.260e-80
Identity = 138/308 (44.81%), Postives = 189/308 (61.36%), Query Frame = 1
Query:  514 WKARAEAHQIRVRALTNGSVHHDH----NDPIFNFLFEYYRFKPRMLLQWTPGFGVCLRDADPSEREGCPLPQKAWEPEPGGGGCYTPLGIDAKRRPNIEWIRDFLEKTSARAPVLHCFGLHEWAMLYRPPGAEEDVRRLYQALPLRVSQEEINEMVEGKGGAMGCTHFDAFRFFTPEARPLNPIQLDRESQRLHDQPGCIHVNMDLFKWALKLWPLLPSEEMADILELAVACRVLDMRASPYDLTAHGKAKDGEVGEGGGKVGSLPPEMWDPSPVRIETEDGRKEYQQAQLELYRRSMPIRRSLLSY 1425
            W+  AE  Q R+  L  G +   +    + PI+NF+FEYY FKP+MLLQ++PG GV L  A P +     L  + +  +  G      L  + K   ++ W RD L+ T  R P LHC+GLHEWAMLY P  ++E     YQ++PLRVSQE +N +++ +GG + CTHFDAFRFFT +A P N +QL RE Q+ ++QPGC+H NMDLFKW +KL P +PS  + D L LA+  RVLDMRASPYD+          +GEG           +D SP+ IET +GR EY++ Q EL++++ PIR  L+ Y
Sbjct:   98 WRREAEKEQARMLELLGGEMRSKNGKSRHHPIYNFIFEYYMFKPKMLLQYSPGLGVRLEGAQPGDPA---LSSRGFSHDSWGAWADPSLAKN-KTVESLRWTRDLLKTTVDRKPELHCYGLHEWAMLYHPAESKEKPPHKYQSIPLRVSQETVNSVIDREGG-IRCTHFDAFRFFTKDASPKNNVQLSREQQQAYEQPGCLHANMDLFKWTIKLSPWVPSSMLQDTLRLAIQARVLDMRASPYDVEG--------MGEG-----------FDLSPIAIETLEGRAEYKRLQAELWKQAGPIRERLVEY 381          
BLAST of mRNA_H-elongata_contig7914.15571.1 vs. uniprot
Match: A0A0M0J9Y2_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J9Y2_9EUKA)

HSP 1 Score: 251 bits (640), Expect = 9.390e-76
Identity = 143/328 (43.60%), Postives = 192/328 (58.54%), Query Frame = 1
Query:  475 LAVNGAAVLSREEWKARAEAHQIRVRALTNGSVHHDHNDPIFNFLFEYYRFKPRMLLQWTPGFGVCLRDADPSEREGCPLPQKAWEPEPGGGGCYTPLGIDAKRRPNIEWIRDFLEKTSARAPVLHCFGLHEWAMLYRPPGAEEDVRRLYQALPLRVSQEEINEMVEGKGGAMGCTHFDAFRFFTPEARPLNPIQL--DRESQRLHDQPGCIHVNMDLFKWALKLWPLLPSEEMADILELAVACRVLDMRASPYDLTAHGKAKDGEVGEGGGKVGSLPPEMWDPSPVRIETEDGRKEYQQAQLELYRRSMPIRRSLLSYIDRLLEVWK 1452
            +A     V+    W+  AEAH+ R+ +L  GS++ D ++PI+NF+F YY F  ++LL+++PG GV L+     E +      + +     G     P+      R         +  TS RAP L+C+GLHEWAMLY+PPG+   + + YQ LPLRVSQ E+N +VE     + CTHFDAFRFFT  A PLN I     R +Q   +QPGC+H +MDLF+++LKLWP LP+E +AD LELA+A RVLDMRASPYDL+             GG  GS      D SPVRIET +GRK YQ+ Q  L   + P+R  LL   D  + VW+
Sbjct:    6 IAAAAPRVIDAPIWRDAAEAHRARMLSLIGGSLNVDLSNPIYNFIFVYYSFDQKLLLRYSPGAGVVLKGVGVKEED--LWTGRGYVSYGDGSARMDPMLCKPSMRNGAVTAASIMRATSGRAPHLNCYGLHEWAMLYQPPGSTCHLSK-YQELPLRVSQAELNAVVESM--PLACTHFDAFRFFTAPATPLNTISPTPSRATQAQLEQPGCVHASMDLFRYSLKLWPWLPAELLADTLELAIASRVLDMRASPYDLSQWQ----------GGAAGSF-----DLSPVRIETAEGRKLYQREQSRLASWAQPLRARLLREYDSAIAVWE 313          
BLAST of mRNA_H-elongata_contig7914.15571.1 vs. uniprot
Match: UPI0018F14E5F (3-methyladenine DNA glycosylase n=1 Tax=Qaidamihabitans albus TaxID=2795733 RepID=UPI0018F14E5F)

HSP 1 Score: 238 bits (607), Expect = 2.040e-71
Identity = 141/326 (43.25%), Postives = 177/326 (54.29%), Query Frame = 1
Query:  493 AVLSREEWKARAEAHQIRVRALTN--------GSVHHDHNDPIFNFLFEYYRFKPRMLLQWTPGFGVCLRDADPSEREGCPLPQKAWEPEPGGGGCYTPLGIDAKRRPNIEWIRDFLEKTSARAPVLHCFGLHEWAMLYRPPGAEEDVRRLYQALPLRVSQEEINEMVEGKGGAMGCTHFDAFRFFTPEARPLNPIQLDRESQRLHDQPGCIHVNMDLFKWALKLWPLLPSEEMADILELAVACRVLDMRASPYDLTAHGKAKDGEVGEGGGKVGSLPPEMWDPSPVRIETEDGRKEYQQAQLELYRRSMPIRRSLLSYIDRLLEV 1446
            A +    W AR  AH  R+R  T         G  H     P+ +FLF YY   P  L +W PG GV L  A PS R       + W  E  GG    P    AKR     ++R  LE T+ R+P L CFGLHEWAM+YR P  +E+VR  +  LPLR+     + +VE  G  + C HFDAFRFFTP ARPLN +Q  R++QR  +QPGC+H NMDL+KWA KL PL+P+E + D  ELA   R+LDMRASPYDL++ G                        SPVRIET +GR EY +AQ E   R+ P+R  L+ +   LL V
Sbjct:    3 ATIPEPRWLARERAHAARMRRWTEPHQRRRSRGEKH-----PVLDFLFTYYWHPPAQLERWQPGPGVVL--AGPSARR---FLDRRWYREVDGGVALDPAAFTAKRERTARYVRALLEATAGRSPRLSCFGLHEWAMVYRQP--QEEVR--HAQLPLRLGAAGTDVVVEDLG--VRCGHFDAFRFFTPPARPLNRLQPTRQTQRDFEQPGCLHANMDLYKWAYKLGPLVPAELLGDCFELAAEVRLLDMRASPYDLSSFGH-----------------------SPVRIETAEGRAEYARAQAEFAHRAAPLRNQLVQHCRSLLGV 289          
BLAST of mRNA_H-elongata_contig7914.15571.1 vs. uniprot
Match: UPI001CA6C2D6 (3-methyladenine DNA glycosylase n=1 Tax=Micromonospora sp. PLK6-60 TaxID=2873383 RepID=UPI001CA6C2D6)

HSP 1 Score: 236 bits (601), Expect = 1.540e-70
Identity = 146/322 (45.34%), Postives = 181/322 (56.21%), Query Frame = 1
Query:  490 AAVLSREEWKARAEAHQIRVRA-----LTNGSVHHDHNDPIFNFLFEYYRFKPRMLLQWTPGFGVCLRDADPSEREGCPLPQKAWEPEPGGGGCYTPLGIDAKRRPNIEWIRDFLEKTSARAPVLHCFGLHEWAMLYRPPGAEEDVRRLYQALPLRVSQEEINEMVEGKGGAMGCTHFDAFRFFTPEARPLNPIQLDRESQRLHDQPGCIHVNMDLFKWALKLWPLLPSEEMADILELAVACRVLDMRASPYDLTAHGKAKDGEVGEGGGKVGSLPPEMWDPSPVRIETEDGRKEYQQAQLELYRRSMPIRRSLLSYIDRLL 1440
            A VL    W+AR  AH+ RV       L        H  P+ +FLF YY  +P  L +W PG GV LRDADP+E        + +   P G    T  G+ A+R  +I WIR  L  T+AR   L CFGLHEWAM+YR    +E+VR  + A PLR++ E    +VE +G  + C+HFDA+RFFT  ARPLN +   RESQ   +QPGC+H NMDL+KWA KL PL+PSE +AD  ELA   RVLDMRASPYDLT  G A                       PVRIET  GR+EY  AQ     R+ P+R  L++  DRLL
Sbjct:    6 APVLDAAAWQARRRAHERRVDGWLAPHLARRRAGRRH--PVEDFLFTYYSHRPAQLRRWHPGAGVTLRDADPAEFG------RDYRAVPAGVTVDTD-GVRARRADSIAWIRGLLAATAARPAQLGCFGLHEWAMVYRQ--TQEEVR--HNAWPLRLTPERTAAVVEERG--VRCSHFDAYRFFTAPARPLNVLSPSRESQHALEQPGCLHANMDLYKWAYKLSPLVPSELVADCFELARDVRVLDMRASPYDLTELGYA-----------------------PVRIETGAGRQEYVLAQRSFADRAAPLRARLVAECDRLL 289          
BLAST of mRNA_H-elongata_contig7914.15571.1 vs. uniprot
Match: A0A498AGD2_9ACTN (Uncharacterized protein n=1 Tax=Micromonospora sp. M71_S20 TaxID=592872 RepID=A0A498AGD2_9ACTN)

HSP 1 Score: 236 bits (601), Expect = 1.740e-70
Identity = 145/326 (44.48%), Postives = 182/326 (55.83%), Query Frame = 1
Query:  490 AAVLSREEWKARAEAHQIRVRA-LT-------NGSVHHDHNDPIFNFLFEYYRFKPRMLLQWTPGFGVCLRDADPSEREGCPLPQKAWEPEPGGGGCYTPLGIDAKRRPNIEWIRDFLEKTSARAPVLHCFGLHEWAMLYRPPGAEEDVRRLYQALPLRVSQEEINEMVEGKGGAMGCTHFDAFRFFTPEARPLNPIQLDRESQRLHDQPGCIHVNMDLFKWALKLWPLLPSEEMADILELAVACRVLDMRASPYDLTAHGKAKDGEVGEGGGKVGSLPPEMWDPSPVRIETEDGRKEYQQAQLELYRRSMPIRRSLLSYIDRLLE 1443
            AAVL    W+AR  AH+ RV   LT        G  H     P+ +FLF YY  +P  L +W PG GV LRDADP+   G     +A       G       + A+R  +I WIR  L  T+ R   L CFG+HEWAM+YR    +E+VR  + A PLR+S E    +VE +G  + C+HFDAFRFFT  ARPLN +   RE+Q  H+QPGC+H NMDL+KWA KL PL+PSE +AD  ELA   R LDMRASPYDL+A G A                       PVR+ET +GR EY +AQ     R+ P+R  L++  DRLL 
Sbjct:    9 AAVLDAARWQARRRAHEERVDTWLTPHLARRRQGGKH-----PVEDFLFTYYSHRPAQLRRWHPGAGVVLRDADPA---GFGRDYRATA----AGVTLDTEAVRARRAESIGWIRALLAATADRPAHLGCFGMHEWAMVYRQ--TQEEVR--HNAWPLRLSPERTAALVEERG--VRCSHFDAFRFFTAPARPLNLLSPTRETQHAHEQPGCLHANMDLYKWAYKLSPLVPSELVADAFELAREIRTLDMRASPYDLSALGYA-----------------------PVRVETVEGRHEYVRAQRSFAERAAPLRARLVAECDRLLS 293          
BLAST of mRNA_H-elongata_contig7914.15571.1 vs. uniprot
Match: A0A2E5HLB1_9DELT (3-methyladenine DNA glycosylase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E5HLB1_9DELT)

HSP 1 Score: 233 bits (595), Expect = 1.690e-69
Identity = 132/320 (41.25%), Postives = 181/320 (56.56%), Query Frame = 1
Query:  499 LSREEWKARAEAHQIRVRALTNGSVHHDHN-----DPIFNFLFEYYRFKPRMLLQWTPGFGVCLRDADPSEREGCPLPQKAWEPEPGGGGCYTPLGIDAKRRPNIEWIRDFLEKTSARAPVLHCFGLHEWAMLYRPPGAEEDVRRLYQALPLRVSQEEINEMVEGKGGAMGCTHFDAFRFFTPEARPLNPIQLDRESQRLHDQPGCIHVNMDLFKWALKLWPLLPSEEMADILELAVACRVLDMRASPYDLTAHGKAKDGEVGEGGGKVGSLPPEMWDPSPVRIETEDGRKEYQQAQLELYRRSMPIRRSLLSYIDRLLE 1443
            LS   W+AR +AH+ R+      SVH +       DP+ +FLFEYY F+P  LL+W+PG GV L      +R    L +K +      G    P     +RR    WI + L +T AR P L C G+HEWAM+YR     ++VR  +  +PLRVS EE+   VE +   + C+HFDAFRFFTP ARPLN +Q   ++    +QPGCIHVNMD+++WA KL P +PSE +AD  +LA   R +DMRASPYDL   G                         P+R+ET +GR EYQ+ Q E++ R +PIR  L++  +RL++
Sbjct:   17 LSEPRWRARQDAHKRRLEPFL--SVHMERRSRRIKDPVADFLFEYYAFRPTRLLRWSPGVGVVLE----GQRADDFLKRKGFS-STSEGVWLDPAAFPPRRRQGARWIHELLVQTQAREPFLGCAGMHEWAMVYRA----DEVR--HDQIPLRVSDEEVARFVESR--PIRCSHFDAFRFFTPAARPLNHLQPAADTMPALEQPGCIHVNMDIYRWAFKLHPWVPSELLADAFDLARDARTIDMRASPYDLRDAGL-----------------------EPLRVETVEGRAEYQRHQREIHLRGLPIRARLIAACERLID 298          
BLAST of mRNA_H-elongata_contig7914.15571.1 vs. uniprot
Match: A0A7J5CLF4_9ACTN (3-methyladenine DNA glycosylase n=1 Tax=Micromonospora sp. ALFpr18c TaxID=1458665 RepID=A0A7J5CLF4_9ACTN)

HSP 1 Score: 233 bits (593), Expect = 2.310e-69
Identity = 137/326 (42.02%), Postives = 179/326 (54.91%), Query Frame = 1
Query:  472 VLAVNGAAVLSREEWKARAEAHQIRVRALTNGSV---HHDHNDPIFNFLFEYYRFKPRMLLQWTPGFGVCLRDADPSEREGCPLPQKAWEPEPGGGGCYTPLGIDAKRRPNIEWIRDFLEKTSARAPVLHCFGLHEWAMLYRPPGAEEDVRRLYQALPLRVSQEEINEMVEGKGGAMGCTHFDAFRFFTPEARPLNPIQLDRESQRLHDQPGCIHVNMDLFKWALKLWPLLPSEEMADILELAVACRVLDMRASPYDLTAHGKAKDGEVGEGGGKVGSLPPEMWDPSPVRIETEDGRKEYQQAQLELYRRSMPIRRSLLSYIDRLL 1440
            + A    AVL    W+AR  AH+ RV       +         P+ +FLF YY  +P  L +W PG GV L DADP+E        + +     G    T  G+ A+R  +I WIR  L  T+ R P   CFG+HEWAM+YR     E++R  + A PLR++ E    +VE +G  + C+HFDA+RFFTP ARPLN +   RE+Q  H+QPGC+H NMDL+KWA K+ PL+PSE +AD  ELA   R LDMRASPYDL+  G                         PVR+ET DGR EY QAQ     R+ P+R  L++  +RLL
Sbjct:    1 MTAALSPAVLDVAAWQARRRAHEQRVDVWLTPHLARRRRGERHPVADFLFTYYSHRPAQLRRWHPGAGVELHDADPAEFG------RDYRATAAGVTVDTD-GVRARRGESIAWIRGLLSATAGRTPHFGCFGMHEWAMVYRQ--TREELR--HNAWPLRLTPERTAAIVEERG--VRCSHFDAYRFFTPPARPLNLLTPTRETQHAHEQPGCLHANMDLYKWAYKMSPLVPSELVADCFELARDIRTLDMRASPYDLSGLGYP-----------------------PVRVETVDGRHEYVQAQRSFAERAKPLRARLIAECERLL 290          
BLAST of mRNA_H-elongata_contig7914.15571.1 vs. uniprot
Match: A0A2W4JFU3_9ACTN (3-methyladenine DNA glycosylase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2W4JFU3_9ACTN)

HSP 1 Score: 233 bits (593), Expect = 3.050e-69
Identity = 139/323 (43.03%), Postives = 181/323 (56.04%), Query Frame = 1
Query:  484 NGAAVLSREEWKARAEAHQIRVRALTNGSVH---HDHNDPIFNFLFEYYRFKPRMLLQWTPGFGVCLRDADPSE--REGCPLPQKAWEPEPGGGGCYTPLGIDAKRRPNIEWIRDFLEKTSARAPVLHCFGLHEWAMLYRPPGAEEDVRRLYQALPLRVSQEEINEMVEGKGGAMGCTHFDAFRFFTPEARPLNPIQLDRESQRLHDQPGCIHVNMDLFKWALKLWPLLPSEEMADILELAVACRVLDMRASPYDLTAHGKAKDGEVGEGGGKVGSLPPEMWDPSPVRIETEDGRKEYQQAQLELYRRSMPIRRSLLSYIDRL 1437
            + A VL  + W+AR +AH+ RV       +    H    P+ +FLF YY ++P  L +W PG GV L DADP+E  R+      +A +    GG       I  +R  ++ WIR  L  T+AR P L CF LHEWAM+YR     E++R  +   PLR+  E    +VE     + C+HFDAFRFFTPEARPLN  QL RE Q  ++QPGC+H NMDL+K+A KL PL+PSE +A+   LA   R LDMRASPYDL+A G                        SPVRIET +GR EY  AQ +   R+ P+R  L+  IDR+
Sbjct:    9 DAAVVLDPDTWRARRDAHRARVDRWLAEHLERRRHGRKHPVEDFLFTYYSYRPGQLRRWHPGAGVLLVDADPAEFGRD-----YRAVD----GGAMLDATAILQRRGQSVAWIRTLLANTAARRPQLSCFNLHEWAMVYRQ--RPEELR--HAGWPLRLGPERTARVVEEL--RLRCSHFDAFRFFTPEARPLNQRQLSREGQLENEQPGCLHANMDLYKYAYKLCPLIPSELVAEAFALAREIRALDMRASPYDLSALGY-----------------------SPVRIETPEGRAEYVAAQRDFAERAAPLRARLIEAIDRV 293          
BLAST of mRNA_H-elongata_contig7914.15571.1 vs. uniprot
Match: UPI0004C72B97 (hypothetical protein n=1 Tax=Streptosporangium amethystogenes TaxID=2002 RepID=UPI0004C72B97)

HSP 1 Score: 229 bits (585), Expect = 2.870e-68
Identity = 140/322 (43.48%), Postives = 176/322 (54.66%), Query Frame = 1
Query:  496 VLSREEWKARAEAHQIRVRA-----LTNGSVHHDHNDPIFNFLFEYYRFKPRMLLQWTPGFGVCLRDADPSEREGCPLPQKAWEPEPGGGGCYTPLGIDAKRRPNIEWIRDFLEKTSARAPVLHCFGLHEWAMLYRPPGAEEDVRRLYQALPLRVSQEEINEMVEGKGGAMGCTHFDAFRFFTPEARPLNPIQLDRESQRLHDQPGCIHVNMDLFKWALKLWPLLPSEEMADILELAVACRVLDMRASPYDLTAHGKAKDGEVGEGGGKVGSLPPEMWDPSPVRIETEDGRKEYQQAQLELYRRSMPIRRSLLSYIDRLLEV 1446
            VLS +EW+ RA AH+ RV A     L  G     H  P+ +FLF YY F+P  LL+W PG  V L  A           Q         G       +  +R   I W R+ L  T++R P L CFG+HEWAM+YR P  E ++R  + + PLR+S E I E+V+ +G  + C HFDAFRFFTP ARPLN IQ  RE QR  +QPGC+H NMDL+KWA KL PL+ SE +AD   LA   R +DMRASPYDL+A G                         P+++ET +GR EY  AQ     RS P+RR LL   DRLL +
Sbjct:    3 VLSEQEWRGRASAHRDRVGAWIEPHLRRGQERVAH--PVEDFLFTYYTFRPGRLLRWHPGAEVILAGASSFGTNYRDCEQ---------GAVLDLELVLPQRTAAISWTRELLAATASRPPYLGCFGMHEWAMVYRTP--EVEIR--HSSFPLRLSPERIEEIVDQRG--VRCGHFDAFRFFTPPARPLNVIQPTRERQRELEQPGCLHANMDLYKWAYKLSPLIGSELVADCFALARDIRTMDMRASPYDLSALGYR-----------------------PIQVETAEGRAEYATAQRAFTERSAPLRRRLLQECDRLLAL 284          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7914.15571.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQE5_ECTSI3.310e-18561.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0D3Z9_9EUKA6.260e-8044.81Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A0M0J9Y2_9EUKA9.390e-7643.60Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
UPI0018F14E5F2.040e-7143.253-methyladenine DNA glycosylase n=1 Tax=Qaidamihab... [more]
UPI001CA6C2D61.540e-7045.343-methyladenine DNA glycosylase n=1 Tax=Micromonos... [more]
A0A498AGD2_9ACTN1.740e-7044.48Uncharacterized protein n=1 Tax=Micromonospora sp.... [more]
A0A2E5HLB1_9DELT1.690e-6941.253-methyladenine DNA glycosylase n=1 Tax=Myxococcal... [more]
A0A7J5CLF4_9ACTN2.310e-6942.023-methyladenine DNA glycosylase n=1 Tax=Micromonos... [more]
A0A2W4JFU3_9ACTN3.050e-6943.033-methyladenine DNA glycosylase n=1 Tax=Actinomyce... [more]
UPI0004C72B972.870e-6843.48hypothetical protein n=1 Tax=Streptosporangium ame... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7914contigH-elongata_contig7914:4337..7263 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score538.1
Seed ortholog evalue3.8e-150
Seed eggNOG ortholog2880.D8LQE5
EggNOG OGs2BYH3@1,2S13W@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-10_005340.1
Exons6
Model size1506
Cds size1302
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7914.15571.1prot_H-elongata_contig7914.15571.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig7914 4385..7107 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931195.7042823-UTR-H-elongata_contig7914:4336..43841622931195.7042823-UTR-H-elongata_contig7914:4336..4384Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7914 4337..4384 -
1691679736.972466-UTR-H-elongata_contig7914:4336..43841691679736.972466-UTR-H-elongata_contig7914:4336..4384Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7914 4337..4384 -
1622931195.824216-UTR-H-elongata_contig7914:7107..72631622931195.824216-UTR-H-elongata_contig7914:7107..7263Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7914 7108..7263 -
1691679737.0297542-UTR-H-elongata_contig7914:7107..72631691679737.0297542-UTR-H-elongata_contig7914:7107..7263Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7914 7108..7263 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931195.722547-CDS-H-elongata_contig7914:4384..46331622931195.722547-CDS-H-elongata_contig7914:4384..4633Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7914 4385..4633 -
1691679736.9815435-CDS-H-elongata_contig7914:4384..46331691679736.9815435-CDS-H-elongata_contig7914:4384..4633Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7914 4385..4633 -
1622931195.7412777-CDS-H-elongata_contig7914:4930..50991622931195.7412777-CDS-H-elongata_contig7914:4930..5099Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7914 4931..5099 -
1691679736.9893477-CDS-H-elongata_contig7914:4930..50991691679736.9893477-CDS-H-elongata_contig7914:4930..5099Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7914 4931..5099 -
1622931195.760787-CDS-H-elongata_contig7914:5302..53851622931195.760787-CDS-H-elongata_contig7914:5302..5385Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7914 5303..5385 -
1691679736.9970195-CDS-H-elongata_contig7914:5302..53851691679736.9970195-CDS-H-elongata_contig7914:5302..5385Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7914 5303..5385 -
1622931195.7774518-CDS-H-elongata_contig7914:5605..58621622931195.7774518-CDS-H-elongata_contig7914:5605..5862Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7914 5606..5862 -
1691679737.0046337-CDS-H-elongata_contig7914:5605..58621691679737.0046337-CDS-H-elongata_contig7914:5605..5862Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7914 5606..5862 -
1622931195.7891347-CDS-H-elongata_contig7914:6086..62411622931195.7891347-CDS-H-elongata_contig7914:6086..6241Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7914 6087..6241 -
1691679737.0127616-CDS-H-elongata_contig7914:6086..62411691679737.0127616-CDS-H-elongata_contig7914:6086..6241Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7914 6087..6241 -
1622931195.8064606-CDS-H-elongata_contig7914:6718..71071622931195.8064606-CDS-H-elongata_contig7914:6718..7107Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7914 6719..7107 -
1691679737.0218165-CDS-H-elongata_contig7914:6718..71071691679737.0218165-CDS-H-elongata_contig7914:6718..7107Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7914 6719..7107 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig7914.15571.1

>prot_H-elongata_contig7914.15571.1 ID=prot_H-elongata_contig7914.15571.1|Name=mRNA_H-elongata_contig7914.15571.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=434bp
MPNTKLATRALMAASASLRAPWVATLEIRGNVINGGSRSLTRSFICSGSL
PRLAANLLTQSEGLHLGGAAFFHKKVTTNASSGVVVRCDTDLRTTDSKTS
NDGVSVLAVNGAAVLSREEWKARAEAHQIRVRALTNGSVHHDHNDPIFNF
LFEYYRFKPRMLLQWTPGFGVCLRDADPSEREGCPLPQKAWEPEPGGGGC
YTPLGIDAKRRPNIEWIRDFLEKTSARAPVLHCFGLHEWAMLYRPPGAEE
DVRRLYQALPLRVSQEEINEMVEGKGGAMGCTHFDAFRFFTPEARPLNPI
QLDRESQRLHDQPGCIHVNMDLFKWALKLWPLLPSEEMADILELAVACRV
LDMRASPYDLTAHGKAKDGEVGEGGGKVGSLPPEMWDPSPVRIETEDGRK
EYQQAQLELYRRSMPIRRSLLSYIDRLLEVWKK*
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mRNA from alignment at H-elongata_contig7914:4337..7263-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig7914.15571.1 ID=mRNA_H-elongata_contig7914.15571.1|Name=mRNA_H-elongata_contig7914.15571.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2927bp|location=Sequence derived from alignment at H-elongata_contig7914:4337..7263- (Himanthalia elongata Himel1 dioecious)
GTATAATTAAGCGGCTTACCTCGGACCTACAGGTTTAATTGTGAACCATA CTGTACGAGGCACCGGTTCAGGGTACACCGTACGCCACCGAACCCCATCA GGATGTCGACATAAATTGCTGTGGTCCCCCAGACTGCGTGTTCAATTTAT ATATCTATGCCCAATACCAAGCTGGCGACAAGAGCCCTGATGGCAGCATC CGCTTCCCTGCGTGCGCCCTGGGTAGCGACACTTGAAATCAGAGGAAACG TCATCAACGGCGGGTCTCGATCGTTAACTCGTTCTTTTATTTGCTCCGGA TCCCTTCCTAGACTTGCTGCAAACCTGTTGACACAATCCGAAGGCCTACA TCTAGGAGGCGCAGCGTTCTTCCACAAGAAAGTTACTACGAACGCTAGTT CGGGGGTTGTGGTTAGATGTGATACCGACCTTAGGACGACTGACTCAAAA ACGAGTAATGATGGTGTATCAGTACTAGCGGTGAACGGTGCTGCAGTGTT GAGTCGAGAGGAGTGGAAGGCGAGAGCGGAGGCTCACCAAATAAGGTGAC GTACGCTCCAGATGCCCATCATTATGGTCTTCATTTATGCTTCTACATCC GTGACTGATGTCTATCATGTCGCTGATTCGGATCGCCACGGTGTTCATCG TGTCTTCTTGAAACATTTTCTACATCGGGCGTATGATGAATACCGGGCGC GCCCGACACCTCTACAACAGTAATATTTTTCTGCAGCATACGCTGCTGGT AGCGTTGCAAGCTTTTTTCGGGATATTATGTTGTGCCATGACCTACCGTC AGAGAGGAACTTGCAGTTGCAGGATGCCCGCGCTGAGGTTTGGGTTTTTC CAATAGTGAAGGTGCCTTGATAGTGCCGAATAGCGCTCGCTTTATTACTT TCTTTAAATTGTCGGACGCCGCGACGGACTCCAAAATAGGCGTCGTTAAT AAATTTATTTTTACCAACGGAAGAGCTGCTTACGCCGAGGTTCAAAGATG CAAGACCTCGTGACGCACGCAGGGTGCGAGCGCTGACGAACGGTTCCGTC CATCACGACCACAACGACCCGATCTTCAACTTCCTCTTTGAGTACTATCG ATTCAAGCCGAGGATGTTGCTGCAGTGGACGCCGGGCTTCGGCGTTTGCC TGCGGGATGCGGATCCTTCGGAGAGAGGTGTGCCGTTCGTCACGCGCTTG CGATCACGTCACAATCCCCCACCCCCCGCACCTTTGTGATCCTCCGCCGC CCCAATTTCGACGGCTTAGAAATATTACTGCGATCACCCCTGAAGGAGCG GATGCGCCCGAAATATATTGGTTCATTGCTGGGGTGCTCACGTGTCACCC GACTCACGGGCCACCATCGTGTGCATGTATTTTTGTGTGAGTTTTCGAGA GAAGGCTGTCCACTTCCGCAAAAAGCTTGGGAGCCCGAGCCGGGCGGGGG GGGGTGCTACACCCCTTTAGGGATCGATGCCAAGAGACGACCCAATATCG AGTGGATTCGCGATTTTCTGGAGAAGACGAGCGCAAGAGCCCCCGTGCTC CACTGTTTTGGACTCCACGAGTGGGCGATGTTGTATCGTCCACCGGGAGC GGAGGAAGACGTTCGACGATTGTACCAGGCGTTACCGCTGCGGGTGTCGC AGGAAGAGGTGAGCAACCGAATAAGCAAGCACAGTCAGCGGTTCTAAATT ATGGAAGCCTTTGACCCGCGTCCTTCGATCGCGCATCTACCATTTGCTCT TCAACGTCACCCCTCCCCCATCAGCATGTTGCCCAAGAAAAGTACAAGAA AGGCGGAAGCGCGTCCTTTCTTCCCTGACGTTGTTAATTTGCGCTGTATT TATACCACCGGGGCGGGGGAGGGGGCAGATCAACGAGATGGTAGAGGGCA AGGGCGGCGCGATGGGATGTACGCATTTCGACGCCTTCCGTTTCTTCACC CCGGAAGCCAGGTGCGTGCGCCGAGCGTTCCTCTTTTTCCTCTCGTACAG AAGTTTCGGTACATGTGCCTACCCCAGGATGCTACCAAGACGCCTTGCGC AGTTCTGGATATTTTTTTAATGGCCTGGAGAAACCAGCCATAAGATCCCC GAAATGGGACAGCTTTACCTTCCTCCCGCCAGATATCTGATCGCTACCAT CACCGCCGACCCAGGCCATTGAATCCGATTCAGCTAGATAGGGAGAGCCA GAGACTTCACGACCAACCGGGCTGCATCCACGTCAACATGGATCTGTTCA AGTGGGCTCTGAAGTTGTGGCCCCTTTTGCCTTCAGAGGAGATGGCGGAT ATCCTTGAGCTCGCGGTCGCCTGCCGAGTGCTGGTGGGTCTATGGTACAA ACAATACAGACACAACATCTCGACTCTTGGGGGGGGGGGGGTTACCTTGT TTTCAATACTTCGTCCTTACCCTTAATAGACAACGGCCTTGAGGACAATC GTGCACCACCAGGAAAGAATCCATGTATAGAACAACTGCGTCAAACCAGG ACATGGGTCTGTTCGCACAAGCAAGGCGAATCTGATCGGGCCGGCCTGGA TCGTTCCGACTTGCCAAAAAATAAGAGACCCGGGAAATTTCTCCGCCACT GCTTTCATTTCATGCCCTTGATCTCATCAGGACATGAGGGCGTCGCCGTA CGATCTCACCGCACACGGCAAGGCTAAAGACGGCGAAGTCGGAGAGGGTG GAGGAAAGGTAGGCAGTCTTCCTCCCGAAATGTGGGACCCTAGCCCCGTG CGAATCGAGACGGAAGATGGTCGAAAGGAGTACCAGCAGGCGCAGCTCGA GCTCTATCGGAGATCCATGCCTATCCGACGCTCCCTGCTAAGTTACATCG ATCGACTGCTGGAGGTCTGGAAAAAGTAATGATGTGGATGGCGCAGCGTC AAGGTCGTGGGTGAAGCATTTTGGTCT
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Coding sequence (CDS) from alignment at H-elongata_contig7914:4337..7263-

>mRNA_H-elongata_contig7914.15571.1 ID=mRNA_H-elongata_contig7914.15571.1|Name=mRNA_H-elongata_contig7914.15571.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2604bp|location=Sequence derived from alignment at H-elongata_contig7914:4337..7263- (Himanthalia elongata Himel1 dioecious)
ATGCCCAATACCAAGCTGGCGACAAGAGCCCTGATGGCAGCATCCGCTTC
CCTGCGTGCGCCCTGGGTAGCGACACTTGAAATCAGAGGAAACGTCATCA
ACGGCGGGTCTCGATCGTTAACTCGTTCTTTTATTTGCTCCGGATCCCTT
CCTAGACTTGCTGCAAACCTGTTGACACAATCCGAAGGCCTACATCTAGG
AGGCGCAGCGTTCTTCCACAAGAAAGTTACTACGAACGCTAGTTCGGGGG
TTGTGGTTAGATGTGATACCGACCTTAGGACGACTGACTCAAAAACGAGT
AATGATGGTGTATCAGTACTAGCGGTGAACGGTGCTGCAGTGTTGAGTCG
AGAGGAGTGGAAGGCGAGAGCGGAGGCTCACCAAATAAGATGCCCAATAC
CAAGCTGGCGACAAGAGCCCTGATGGCAGCATCCGCTTCCCTGCGTGCGC
CCTGGGTAGCGACACTTGAAATCAGAGGAAACGTCATCAACGGCGGGTCT
CGATCGTTAACTCGTTCTTTTATTTGCTCCGGATCCCTTCCTAGACTTGC
TGCAAACCTGTTGACACAATCCGAAGGCCTACATCTAGGAGGCGCAGCGT
TCTTCCACAAGAAAGTTACTACGAACGCTAGTTCGGGGGTTGTGGTTAGA
TGTGATACCGACCTTAGGACGACTGACTCAAAAACGAGTAATGATGGTGT
ATCAGTACTAGCGGTGAACGGTGCTGCAGTGTTGAGTCGAGAGGAGTGGA
AGGCGAGAGCGGAGGCTCACCAAATAAGGGTGCGAGCGCTGACGAACGGT
TCCGTCCATCACGACCACAACGACCCGATCTTCAACTTCCTCTTTGAGTA
CTATCGATTCAAGCCGAGGATGTTGCTGCAGTGGACGCCGGGCTTCGGCG
TTTGCCTGCGGGATGCGGATCCTTCGGAGAGAGGGTGCGAGCGCTGACGA
ACGGTTCCGTCCATCACGACCACAACGACCCGATCTTCAACTTCCTCTTT
GAGTACTATCGATTCAAGCCGAGGATGTTGCTGCAGTGGACGCCGGGCTT
CGGCGTTTGCCTGCGGGATGCGGATCCTTCGGAGAGAGAAGGCTGTCCAC
TTCCGCAAAAAGCTTGGGAGCCCGAGCCGGGCGGGGGGGGGTGCTACACC
CCTTTAGGGATCGATGCCAAGAGACGACCCAATATCGAGTGGATTCGCGA
TTTTCTGGAGAAGACGAGCGCAAGAGCCCCCGTGCTCCACTGTTTTGGAC
TCCACGAGTGGGCGATGTTGTATCGTCCACCGGGAGCGGAGGAAGACGTT
CGACGATTGTACCAGGCGTTACCGCTGCGGGTGTCGCAGGAAGAGAAGGC
TGTCCACTTCCGCAAAAAGCTTGGGAGCCCGAGCCGGGCGGGGGGGGGTG
CTACACCCCTTTAGGGATCGATGCCAAGAGACGACCCAATATCGAGTGGA
TTCGCGATTTTCTGGAGAAGACGAGCGCAAGAGCCCCCGTGCTCCACTGT
TTTGGACTCCACGAGTGGGCGATGTTGTATCGTCCACCGGGAGCGGAGGA
AGACGTTCGACGATTGTACCAGGCGTTACCGCTGCGGGTGTCGCAGGAAG
AGATCAACGAGATGGTAGAGGGCAAGGGCGGCGCGATGGGATGTACGCAT
TTCGACGCCTTCCGTTTCTTCACCCCGGAAGCCAGATCAACGAGATGGTA
GAGGGCAAGGGCGGCGCGATGGGATGTACGCATTTCGACGCCTTCCGTTT
CTTCACCCCGGAAGCCAGGCCATTGAATCCGATTCAGCTAGATAGGGAGA
GCCAGAGACTTCACGACCAACCGGGCTGCATCCACGTCAACATGGATCTG
TTCAAGTGGGCTCTGAAGTTGTGGCCCCTTTTGCCTTCAGAGGAGATGGC
GGATATCCTTGAGCTCGCGGTCGCCTGCCGAGTGCTGGCCATTGAATCCG
ATTCAGCTAGATAGGGAGAGCCAGAGACTTCACGACCAACCGGGCTGCAT
CCACGTCAACATGGATCTGTTCAAGTGGGCTCTGAAGTTGTGGCCCCTTT
TGCCTTCAGAGGAGATGGCGGATATCCTTGAGCTCGCGGTCGCCTGCCGA
GTGCTGGACATGAGGGCGTCGCCGTACGATCTCACCGCACACGGCAAGGC
TAAAGACGGCGAAGTCGGAGAGGGTGGAGGAAAGGTAGGCAGTCTTCCTC
CCGAAATGTGGGACCCTAGCCCCGTGCGAATCGAGACGGAAGATGGTCGA
AAGGAGTACCAGCAGGCGCAGCTCGAGCTCTATCGGAGATCCATGCCTAT
CCGACGCTCCCTGCTAAGTTACATCGATCGACTGCTGGAGGTCTGGAAAA
AGTAAGACATGAGGGCGTCGCCGTACGATCTCACCGCACACGGCAAGGCT
AAAGACGGCGAAGTCGGAGAGGGTGGAGGAAAGGTAGGCAGTCTTCCTCC
CGAAATGTGGGACCCTAGCCCCGTGCGAATCGAGACGGAAGATGGTCGAA
AGGAGTACCAGCAGGCGCAGCTCGAGCTCTATCGGAGATCCATGCCTATC
CGACGCTCCCTGCTAAGTTACATCGATCGACTGCTGGAGGTCTGGAAAAA
GTAA
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