mRNA_H-elongata_contig79128.15568.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: D7FQS4_ECTSI (Peroxisomal membrane protein 70 abcd3, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS4_ECTSI) HSP 1 Score: 197 bits (500), Expect = 5.310e-57 Identity = 98/123 (79.67%), Postives = 108/123 (87.80%), Query Frame = 1
Query: 1 RQAHRGGVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 369
++A GV+D LLS+L SV+LGY+L+RE GWDAVRDWS+VLSGGEKQRLALSRLFYHRPQFAILDE TSAVSVDVEGDIYR AA SGITLFTVSHRKSLW+HH +LLRFDGLGGY FK M
Sbjct: 585 QEAASKGVTDVDLLSVLDSVRLGYVLDREG--GWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGDIYRLAASSGITLFTVSHRKSLWKHHGYLLRFDGLGGYEFKAM 705
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: A0A4P9ZPW7_9FUNG (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZPW7_9FUNG) HSP 1 Score: 157 bits (398), Expect = 3.400e-47 Identity = 77/117 (65.81%), Postives = 98/117 (83.76%), Query Frame = 1
Query: 19 GVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 369
G++D+ L++IL+ V L YL+ RE GW+++RDW++VLSGGEKQR+A++RLFYHRPQFAILDE TSAVSVDVEG +Y A R GITLFTVSHR SL+++H+ LLRFDG GGY F P+
Sbjct: 32 GLTDDDLVNILKVVHLEYLVGREG--GWNSIRDWADVLSGGEKQRVAMARLFYHRPQFAILDECTSAVSVDVEGIMYNHAKRVGITLFTVSHRTSLFKYHDFLLRFDGEGGYSFDPL 146
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: UPI0009A3418A (ATP-binding cassette sub-family D member 3 n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A3418A) HSP 1 Score: 161 bits (408), Expect = 6.750e-47 Identity = 76/117 (64.96%), Postives = 92/117 (78.63%), Query Frame = 1
Query: 19 GVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 369
G+SD+ L L +V+LG++LERE GWD ++DW +VLSGGEKQR+A++RLFYH+PQFAILDE TSAVSVDVEG IY + GITLFTVSHRKSLW HH + L DG G Y FKP+
Sbjct: 171 GISDQVLKEYLDNVQLGHILEREG--GWDCIQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEGYIYSHCRKVGITLFTVSHRKSLWTHHEYYLHMDGRGNYEFKPI 285
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: U6DM48_NEOVI (ATP-binding cassette, sub-family D (ALD), member 3 (Fragment) n=1 Tax=Neovison vison TaxID=452646 RepID=U6DM48_NEOVI) HSP 1 Score: 159 bits (403), Expect = 2.130e-46 Identity = 77/119 (64.71%), Postives = 93/119 (78.15%), Query Frame = 1
Query: 13 RGGVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 369
R G+SD L L +V+LG++LERE GWD+V+DW +VLSGGEKQR+A++RLFYH+PQFAILDE TSAVSVDVEG IY + GITLFTVSHRKSLW+HH + L DG G Y FK +
Sbjct: 147 RKGISDLVLKEYLDNVQLGHILEREG--GWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEGYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHMDGRGNYEFKQI 263
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: A0A822GLU9_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822GLU9_9NEOB) HSP 1 Score: 161 bits (408), Expect = 2.540e-46 Identity = 77/119 (64.71%), Postives = 94/119 (78.99%), Query Frame = 1
Query: 13 RGGVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 369
R G+SD+ L L +V+LG +L+RE GWD+V+DW +VLSGGEKQR+A++RLFYH+PQFAILDE TSAVSVDVEG IY + GITLFTVSHRKSLW+HH + L DG G Y FKP+
Sbjct: 222 RRGISDKVLKEYLDNVQLGQILDREG--GWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEGYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHMDGRGNYDFKPI 338
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: UPI001885737E (ATP-binding cassette sub-family D member 3-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001885737E) HSP 1 Score: 167 bits (423), Expect = 3.520e-46 Identity = 80/117 (68.38%), Postives = 95/117 (81.20%), Query Frame = 1
Query: 19 GVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 369
G SD+ LL +L+ V+LGY+ ERE GWDAV DWS+VLSGGEKQR+A++RLFYHRPQFAILDE TSAVSVDVEG +YR+ GITLFTVSHRKSLW HH + L+ DG G + FKP+
Sbjct: 557 GRSDDWLLQLLEEVQLGYI--HERESGWDAVADWSDVLSGGEKQRVAMARLFYHRPQFAILDECTSAVSVDVEGSMYRYCREQGITLFTVSHRKSLWVHHEYYLQMDGRGAFVFKPI 671
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: UPI001304165B (ATP-binding cassette sub-family D member 3-like n=1 Tax=Nomia melanderi TaxID=2448451 RepID=UPI001304165B) HSP 1 Score: 155 bits (392), Expect = 5.310e-46 Identity = 73/124 (58.87%), Postives = 94/124 (75.81%), Query Frame = 1
Query: 13 RGGVSDEALLSILQSVKLGYLLERERE-----KGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 369
RG ++D L +L V+LG+LL+RE +GWD V DW +VLSGGEKQR+A++RLFYH+PQFAILDE TSAVSVDVE +Y + + ITLFTVSHR++LW+HH + L+ DG GGY FKP+
Sbjct: 39 RGKMTDHDLKYLLDLVQLGHLLDREGSANVVGQGWDVVADWMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEDSMYSYCRQENITLFTVSHRRTLWKHHEYFLQMDGRGGYEFKPI 162
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: A0A182KFX8_9DIPT (ABC transporter domain-containing protein n=1 Tax=Anopheles christyi TaxID=43041 RepID=A0A182KFX8_9DIPT) HSP 1 Score: 153 bits (387), Expect = 8.090e-46 Identity = 76/119 (63.87%), Postives = 91/119 (76.47%), Query Frame = 1
Query: 13 RGGVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 369
R G +D LL L V+L YL + REKG DA+ DW +VLSGGEKQR+A++RLFYH PQFAILDE TSAVSVDVEG +Y++ GITLFTVSHRKSLW HH++ L+FDG G Y F P+
Sbjct: 3 RRGKTDADLLKYLDLVQLTYL--QVREKGLDAIEDWIDVLSGGEKQRIAMARLFYHNPQFAILDECTSAVSVDVEGSMYQYCRAVGITLFTVSHRKSLWTHHDYYLKFDGHGAYEFGPI 119
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: A0A1X7UZA4_AMPQE (ABC transporter domain-containing protein n=3 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UZA4_AMPQE) HSP 1 Score: 162 bits (410), Expect = 9.270e-46 Identity = 78/117 (66.67%), Postives = 93/117 (79.49%), Query Frame = 1
Query: 19 GVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 369
G+SD+ L L V+L YLLERER GWDA +DW +VLSGGEKQR+A++RLFYH+PQFAILDE TSAVSVDVEG IY GITLFTVSHRKSLW+HH ++++FDG G Y FK +
Sbjct: 316 GISDQVLEEYLTKVQLKYLLERER--GWDAFQDWMDVLSGGEKQRMAMARLFYHQPQFAILDECTSAVSVDVEGYIYTHCREKGITLFTVSHRKSLWQHHEYVMQFDGRGAYEFKRI 430
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: A0A6I9YZN1_9SAUR (ATP-binding cassette sub-family D member 3-like n=1 Tax=Thamnophis sirtalis TaxID=35019 RepID=A0A6I9YZN1_9SAUR) HSP 1 Score: 159 bits (403), Expect = 1.090e-45 Identity = 77/119 (64.71%), Postives = 93/119 (78.15%), Query Frame = 1
Query: 13 RGGVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 369
R G+SD+ L L +V+LG +LERE GWD+V+DW +VLSGGEKQR+A++RLFYH+PQFAILDE TSAVSVDVEG IY + GITLFTVSHRKSLW+HH+ L DG G Y FK +
Sbjct: 211 RKGISDQVLKEYLDNVQLGQILEREG--GWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEGYIYSHCRKVGITLFTVSHRKSLWKHHDFYLHMDGRGNYEFKKI 327 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig79128.15568.1 >prot_H-elongata_contig79128.15568.1 ID=prot_H-elongata_contig79128.15568.1|Name=mRNA_H-elongata_contig79128.15568.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp RQAHRGGVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQback to top mRNA from alignment at H-elongata_contig79128:1307..2506- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig79128.15568.1 ID=mRNA_H-elongata_contig79128.15568.1|Name=mRNA_H-elongata_contig79128.15568.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1200bp|location=Sequence derived from alignment at H-elongata_contig79128:1307..2506- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig79128:1307..2506- >mRNA_H-elongata_contig79128.15568.1 ID=mRNA_H-elongata_contig79128.15568.1|Name=mRNA_H-elongata_contig79128.15568.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=738bp|location=Sequence derived from alignment at H-elongata_contig79128:1307..2506- (Himanthalia elongata Himel1 dioecious)back to top |