mRNA_H-elongata_contig78957.15558.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig78957.15558.1
Unique NamemRNA_H-elongata_contig78957.15558.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig78957.15558.1 vs. uniprot
Match: D7G7V3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V3_ECTSI)

HSP 1 Score: 388 bits (996), Expect = 7.440e-127
Identity = 192/274 (70.07%), Postives = 225/274 (82.12%), Query Frame = 3
Query:    3 NRGMFYPGVFQFSLELARYRVPSWQTPLSVAVLTARAREFLFALEICDTHEISKRFRLCGQRNGLKAWGRGPVLYGSVKEWICPSRKSDRKFKNFRKLVEADGQGGRGRPNGAEGGYIFVGDTGEGDPRAGEMMTERYPERMRAVFLHVVSDTRKQGRVSVPEDRTVNGVPIVYFRTYVGAAAKAVELGLMDKSGLENVIIAAKETLVNVPAKSSKWSDMMTDLVRAESVESPLRSLGAETLTLAIDDALAPKM--KLESAVPQLPGLAIATRK 818
             RG+FYPGVFQFSLEL+RYRVPSWQ PLSVAVLTARAREFLFALEI DTHEI++ FR CG+RNG+K WGRGPVLYGSVKEW+CPSRKS+RK +NF  L+E D +GGRGRP+GAEGGYIF+GDTGEGDPRAGE+M+  +P+RMRAVFLHVVSD  +QG+V VP DR VN VP+VYFRTYVGAA KAVELGLMDK GLENVI AAKE +  VP +SSKW D+  DL+ A++ E+ L S+G +TLT A+DDAL  K+  K   AV + P +  A  K
Sbjct:  127 RRGVFYPGVFQFSLELSRYRVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVCPSRKSERKARNFGFLLEDDEKGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAEHPDRMRAVFLHVVSDGPQQGKVPVPMDRVVNAVPVVYFRTYVGAAVKAVELGLMDKKGLENVITAAKEAMTKVPRQSSKWEDINRDLMMAQTSETQLPSIGVKTLTSALDDALGSKINTKRNGAVRRRPPVTTAATK 400          
BLAST of mRNA_H-elongata_contig78957.15558.1 vs. uniprot
Match: A0A835YMG4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG4_9STRA)

HSP 1 Score: 236 bits (603), Expect = 3.080e-70
Identity = 125/232 (53.88%), Postives = 155/232 (66.81%), Query Frame = 3
Query:    3 NRGMFYPGVFQFSLELARYRVPSWQTPLSVAVLTARAREFLFALEICDTHEISKRFRLCGQRNGLKAWGRGPVLYGSVKEWICPSRKSDRKFKNFRKLVEADGQGGRGRPNGAEGGYIFVGDTGEGDPRAGEMMTERYPERMRAVFLHVV---SDTRKQGRVSVPEDRTVNGVPIVYFRTYVGAAAKAVELGLMDKSGLENVIIAAKETLV--NVPAKSSKWSDMMTDLVRA 683
             RG FYPGVFQF LELA + VP    PL +AVLTARA+E LFALE+   H +S  +R CG  NG++ WG GP+LYGSVKEWIC +RKS RK KNFR+L+E DG+    R    E  Y+F+GDTGEGD +AG  M E +P  +RA+FLH+V    D  K     VPED  VNGVP+++F+TYVGAA KA E GL+++  +E VI  A E L     P  SSKWSD+  D+  A
Sbjct:   35 ERGQFYPGVFQFGLELAAHGVPRGLMPLPIAVLTARAKELLFALELDMEHPVSVAYRQCGAENGMEGWGLGPILYGSVKEWICWTRKSRRKVKNFRRLMELDGRNAIARGYMTE--YVFIGDTGEGDFKAGIKMCENFPRELRALFLHMVYCVDDVCK-----VPEDYAVNGVPVLFFKTYVGAARKAYEAGLLNRYAVERVIAKAVEELEYSGAPRTSSKWSDLEADIEAA 259          
BLAST of mRNA_H-elongata_contig78957.15558.1 vs. uniprot
Match: A0A835YPL0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPL0_9STRA)

HSP 1 Score: 234 bits (597), Expect = 7.110e-69
Identity = 122/229 (53.28%), Postives = 152/229 (66.38%), Query Frame = 3
Query:    3 NRGMFYPGVFQFSLELARYRVPSWQTPLSVAVLTARAREFLFALEICDTHEISKRFRLCGQRNGLKAWGRGPVLYGSVKEWICPSRKSDRKFKNFRKLVEADGQGGRGRPNGAEGGYIFVGDTGEGDPRAGEMMTERYPERMRAVFLHVVSDTRKQGRVSVPEDRTVNGVPIVYFRTYVGAAAKAVELGLMDKSGLENVIIAA--KETLVNVPAKSSKWSDMMTDLVRA 683
             RG FYPGVFQF+LELA +  P    PL VAVLTARA+EFLFALE+   H +S  +R CG  NG   WG GPVLYGSVKEWI  +RK  RKFKNF++L+E DG     R  G    YIF+GDTGEGD +AG  M E +P  +RA+F+H VS   +      P+D T+NGVP+++F+TYVGAA KA E GLMDK+G++ VI  +  +  L   P   SKW DM  D+ +A
Sbjct:   68 ERGQFYPGVFQFALELAAHGTPQGLLPLPVAVLTARAKEFLFALELKTEHPVSIAYRQCGTDNGFDGWGLGPVLYGSVKEWIVWTRKGRRKFKNFKRLMEIDGTHAAAR--GCATDYIFIGDTGEGDTKAGVKMCETFPRELRAMFMHAVSCDSEY--CITPDDYTINGVPVLFFKTYVGAARKAYEAGLMDKAGVQRVIDRSVMELELSGAPRDCSKWEDMEMDIEQA 292          
BLAST of mRNA_H-elongata_contig78957.15558.1 vs. uniprot
Match: A0A7S0UKK8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UKK8_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.260e-60
Identity = 112/228 (49.12%), Postives = 146/228 (64.04%), Query Frame = 3
Query:    3 NRGMFYPGVFQFSLELARYRVPSWQTPLSVAVLTARAREFLFALEICDTHEISKRFRLCGQRNGLKAWGRGPVLYGSVKEWICPSRKSDRKFKNFRKLVEADGQGGRGRPNGAEGGYIFVGDTGEGDPRAGEMMTERYPERMRAVFLHVVSDTRKQGRVSVPEDRTVNGVPIVYFRTYVGAAAKAVELGLMDKSGLENVIIAAKETLVNVPAKSSKWSDMMTDLVRAE 686
            +RG FYPGV +F L L++  +     P ++A+LTARA EF  ALEI +  +++   R  G++ G+  WG GPVLYGSV EWI   RK  RKF NF +L+E D       P G    YI+VGDTGE D  AGE M   YPE M+AVFLHVV+D   +G   +P  + +NG P+++FRTYVGAA  AV+LGLM   GL++VI AA E L +VP  S KW D+  D+ RA+
Sbjct:   85 DRGDFYPGVGEFMLALSQCGLTEEVNPANIAILTARAEEFKAALEIKEGSKLAVALRSAGEKVGINGWGVGPVLYGSVAEWIAQDRKGLRKFTNFERLIEQD-------PTGTIFQYIYVGDTGELDQEAGETMLREYPEVMKAVFLHVVTDD-VEGPPLIPPPKLINGHPVIFFRTYVGAAIDAVQLGLMSLDGLQSVIEAATEKLSDVPENSDKWKDIRKDMARAD 304          
BLAST of mRNA_H-elongata_contig78957.15558.1 vs. uniprot
Match: A0A1E7FEW2_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEW2_9STRA)

HSP 1 Score: 210 bits (534), Expect = 2.700e-59
Identity = 115/230 (50.00%), Postives = 148/230 (64.35%), Query Frame = 3
Query:    3 NRGMFYPGVFQFSLELARYRVPSWQT--PLSVAVLTARAREFLFALEICDTHEISKRFRLCGQRNGLKAWGRGPVLYGSVKEWICPSRKSDRKFKNFRKLVEADGQGGRGRPNGAEGGYIFVGDTGEGDPRAGEMMTERYPERMRAVFLHVVSDTRKQGRVSVPEDRTVNGVPIVYFRTYVGAAAKAVELGLMDKSGLENVIIAAKETLVNVPAKSSKWSDMMTDLVRAE 686
             RG FYPGV +F L+L+ Y++    +  P ++A+LTARA EF  ALEI D  ++S   R  G++ G++ WG GPVLYGSV EWI   RK  RKF NF +L++ D       P G    YI+VGD GE D  AGE M   YPE ++AVFLHVV+D      + +P  + +NG PIV+FRTYVGAA  AV+LGLM+  GL++VI AA E L +VP  S KW D+  DL RAE
Sbjct:   93 GRGDFYPGVAEFMLQLSLYKLLQQDSNYPANIAILTARAEEFKAALEIKDGSKLSIALRSAGEKAGIEGWGVGPVLYGSVAEWIIQDRKGLRKFTNFERLMQQD-------PAGVIFQYIYVGDVGELDQEAGETMVREYPEVVKAVFLHVVTDQADVPPI-IPAPKFINGRPIVFFRTYVGAAVDAVQLGLMNLDGLQSVINAAIEKLSDVPETSDKWKDIRKDLSRAE 314          
BLAST of mRNA_H-elongata_contig78957.15558.1 vs. uniprot
Match: A0A6V2PZW2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PZW2_9STRA)

HSP 1 Score: 209 bits (531), Expect = 9.540e-59
Identity = 115/241 (47.72%), Postives = 145/241 (60.17%), Query Frame = 3
Query:    3 NRGMFYPGVFQFSLELARYRVPSWQT--------------PLSVAVLTARAREFLFALEICDTHEISKRFRLCGQRNGLKAWGRGPVLYGSVKEWICPSRKSDRKFKNFRKLVEADGQGGRGRPNGAEGGYIFVGDTGEGDPRAGEMMTERYPERMRAVFLHVVSDTRKQGRVSVPEDRTVNGVPIVYFRTYVGAAAKAVELGLMDKSGLENVIIAAKETLVNVPAKSSKWSDMMTDLVRA 683
             RG FYPGVFQF LEL+ +++                   P  VAVLTARA EF  ALE+    +++K FR  G++ G++ WG GPVLYGSV EW+   RK  RKF NF +L+E D       P G    Y++VGDTGE D  AGE M   YPE ++AVFLHVVSD        +P  + +NG PIV+FRTYVGAAAKAV+LGLM + GL  VI+ A+  L  VP  + KW D+  D+  A
Sbjct:   92 ERGDFYPGVFQFMLELSMHKLGEGPNESEGDDTGEEDRLYPPKVAVLTARAEEFKVALELKGNSKLAKAFRKTGEKAGIEDWGLGPVLYGSVAEWVIQDRKGLRKFSNFERLIEQD-------PTGTIMQYVYVGDTGELDQEAGETMLREYPEVVKAVFLHVVSDAPFP---RIPPPKLINGRPIVFFRTYVGAAAKAVQLGLMYEEGLMRVIVEAEAALEGVPRSNEKWLDLERDISEA 322          
BLAST of mRNA_H-elongata_contig78957.15558.1 vs. uniprot
Match: A0A7S4CYL7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CYL7_9EUGL)

HSP 1 Score: 212 bits (539), Expect = 3.690e-58
Identity = 116/238 (48.74%), Postives = 153/238 (64.29%), Query Frame = 3
Query:    3 NRGMFYPGVFQFSLELARYRVPSWQTPLSVAVLTARAREFLFALEICDTHEISKRFRLCGQRNGLKAWGRGPVLYGSVKEWICPSRKSDRKFKNFRKLVEADGQGGRGRPNGAEGGYIFVGDTGEGDPRAGEMMTERYPERMRAVFLHVVSDTRKQGRVSVPEDRTVNGVPIVYFRTYVGAAAKAVELGLMDKSGLENVIIAAKETLVNVPAKSSKWSDMMTDLVRAESVESPLRSLG 716
             RG+FYPGVF+F LELA Y     + PLSVAVLTARAREFLFALE+ ++H I K FR  G+ +G + WG G VLYGSV+EW+C  RKS RK +NF+ L+ +        P  A   ++FVGDTGE D  AGE+M E +P  M+A+FLHVV+         +P D+ +NG P+V+FRTYVGAA KAV+ GL+   GL  V+ AA+  L  +  +S+  S    DL R  ++  PL + G
Sbjct:  246 RRGLFYPGVFRFMLELASYATT--EAPLSVAVLTARAREFLFALELDESHAICKAFRDTGRASGHEDWGIGEVLYGSVQEWVCQGRKSWRKVENFKLLLSS-------LPPDAARRFVFVGDTGELDQEAGEIMLEEFPSCMQALFLHVVAPDPALVPAPLPRDKLINGAPVVFFRTYVGAARKAVKYGLLGVDGLAAVVEAARADLERIEPESAGGSSRWADLNRDIALCQPLLAEG 474          
BLAST of mRNA_H-elongata_contig78957.15558.1 vs. uniprot
Match: A0A7S2IAS8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IAS8_9STRA)

HSP 1 Score: 207 bits (527), Expect = 4.960e-58
Identity = 114/240 (47.50%), Postives = 144/240 (60.00%), Query Frame = 3
Query:    3 NRGMFYPGVFQFSLELARYRVPS-------------WQTPLSVAVLTARAREFLFALEICDTHEISKRFRLCGQRNGLKAWGRGPVLYGSVKEWICPSRKSDRKFKNFRKLVEADGQGGRGRPNGAEGGYIFVGDTGEGDPRAGEMMTERYPERMRAVFLHVVSDTRKQGRVSVPEDRTVNGVPIVYFRTYVGAAAKAVELGLMDKSGLENVIIAAKETLVNVPAKSSKWSDMMTDLVRA 683
             RG FYPGVFQF LEL+   + +             +  P  VAVLTARA EF  ALE+    +++K FR  G++ G+  WG GPVLYGSV EW+   RK  RKF NF +L+E D       P G    Y++VGDTGE D  AGE M   YPE ++AVFLHVVSD        VP  + +NG P+V+FRTYVGAAA+AV+LGLM + GL  VI+ A+  L  VP  + KW D+  D+  A
Sbjct:  104 TRGEFYPGVFQFMLELSMPTLDNDDDENDTENEKSQFLYPPKVAVLTARAEEFKVALELKGNSKLAKAFRKTGEKAGIDDWGLGPVLYGSVAEWVIQDRKGMRKFSNFERLIEQD-------PTGTIMQYVYVGDTGELDQEAGETMLREYPEVVKAVFLHVVSDAPFP---RVPPPKLINGRPVVFFRTYVGAAARAVQLGLMQEEGLMRVIVEAEAALKGVPTSNEKWLDLERDISEA 333          
BLAST of mRNA_H-elongata_contig78957.15558.1 vs. uniprot
Match: W7UBU9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBU9_9STRA)

HSP 1 Score: 208 bits (530), Expect = 1.190e-57
Identity = 106/207 (51.21%), Postives = 139/207 (67.15%), Query Frame = 3
Query:    3 NRGMFYPGVFQFSLELARYRVPSWQTPLSVAVLTARAREFLFALEICDTHEISKRFRLCGQRNGLKAWGRGPVLYGSVKEWICPSRKSDRKFKNFRKLVEADGQGGRGRPNGAEGGYIFVGDTGEGDPRAGEMMTERYPERMRAVFLHVVSDTRKQGRVSVPEDRTVNGVPIVYFRTYVGAAAKAVELGLMDKSGLENVIIAAKETL 623
             RG +YPG FQF+LEL+R+ VP  + P  VAVLTARAREF FALE+  +H++ + +   G  NG++ WG G VLYGSVKEW+C SRK  RKF+NF  L   D      R +  +  Y+FVGDTGE D +AGE M  +YP R++A+F+H VS++R       P DRT+  VP++YFRTYVGAA KA ELGL+  SG+E V+    E +
Sbjct:  137 KRGQYYPGAFQFALELSRFGVPEGREPARVAVLTARAREFKFALELKPSHKVCRTYAAAGANNGVEGWGVGTVLYGSVKEWVCQSRKGLRKFRNFEALRAQD------RLDRTD--YVFVGDTGELDLQAGESMIRKYPSRIKALFMHYVSESRPSP--PPPRDRTLLDVPVIYFRTYVGAAVKAAELGLLGPSGVEAVVARTLEEI 333          
BLAST of mRNA_H-elongata_contig78957.15558.1 vs. uniprot
Match: A0A1Z5KGY8_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGY8_FISSO)

HSP 1 Score: 200 bits (509), Expect = 3.220e-56
Identity = 107/227 (47.14%), Postives = 142/227 (62.56%), Query Frame = 3
Query:    3 NRGMFYPGVFQFSLELARYRVPSWQTPLSVAVLTARAREFLFALEICDTHEISKRFRLCGQRNGLKAWGRGPVLYGSVKEWICPSRKSDRKFKNFRKLVEADGQGGRGRPNGAEGGYIFVGDTGEGDPRAGEMMTERYPERMRAVFLHVVSDTRKQGRVSVPEDRTVNGVPIVYFRTYVGAAAKAVELGLMDKSGLENVIIAAKETLVNVPAKSSKWSDMMTDLVRA 683
             RG+ YPGV +F  +L+   V    TP  VA+LTARA EF  ALE+  +  ++++F   G+R G+  WG GPVLYGSV EW+   RK  RKF NF +L++ D       P G    Y++VGDTGE D +A E M   YPE ++AVFLHVVS   + G V +P  + +NG P+++FRTYVGAA  AVELGLM + GL  VI A+  +L + P  S KW D+  D+ RA
Sbjct:   58 ERGVVYPGVAEFMFQLSSNNVA---TPAKVAILTARAEEFKAALELKASSSLARKFAQAGERAGVSGWGIGPVLYGSVAEWVIQDRKGLRKFTNFERLLQQD-------PTGEVLRYVYVGDTGELDQQAAETMLREYPEIVQAVFLHVVSG--ELGDVFIPPPKLINGRPVIFFRTYVGAALAAVELGLMPREGLVQVIDASVLSLADEPRSSDKWKDLEVDMERA 272          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78957.15558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7V3_ECTSI7.440e-12770.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YMG4_9STRA3.080e-7053.88Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YPL0_9STRA7.110e-6953.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0UKK8_9STRA1.260e-6049.12Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A1E7FEW2_9STRA2.700e-5950.00Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A6V2PZW2_9STRA9.540e-5947.72Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4CYL7_9EUGL3.690e-5848.74Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S2IAS8_9STRA4.960e-5847.50Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
W7UBU9_9STRA1.190e-5751.21Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A1Z5KGY8_FISSO3.220e-5647.14Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig78957contigH-elongata_contig78957:104..2231 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score387.1
Seed ortholog evalue7.1e-105
Seed eggNOG ortholog2880.D7G7V3
EggNOG OGs2AJYC@1,2RZ89@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-06_000190.1
Exons2
Model size1809
Cds size858
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig78957.15558.1prot_H-elongata_contig78957.15558.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig78957 1044..2220 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931194.1637044-UTR-H-elongata_contig78957:103..10431622931194.1637044-UTR-H-elongata_contig78957:103..1043Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig78957 104..1043 -
1691679736.440453-UTR-H-elongata_contig78957:103..10431691679736.440453-UTR-H-elongata_contig78957:103..1043Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig78957 104..1043 -
1622931194.220656-UTR-H-elongata_contig78957:2220..22311622931194.220656-UTR-H-elongata_contig78957:2220..2231Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig78957 2221..2231 -
1691679736.4884984-UTR-H-elongata_contig78957:2220..22311691679736.4884984-UTR-H-elongata_contig78957:2220..2231Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig78957 2221..2231 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931194.1799448-CDS-H-elongata_contig78957:1043..12951622931194.1799448-CDS-H-elongata_contig78957:1043..1295Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig78957 1044..1295 -
1691679736.4532974-CDS-H-elongata_contig78957:1043..12951691679736.4532974-CDS-H-elongata_contig78957:1043..1295Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig78957 1044..1295 -
1622931194.2028553-CDS-H-elongata_contig78957:1614..22201622931194.2028553-CDS-H-elongata_contig78957:1614..2220Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig78957 1615..2220 -
1691679736.469794-CDS-H-elongata_contig78957:1614..22201691679736.469794-CDS-H-elongata_contig78957:1614..2220Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig78957 1615..2220 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig78957.15558.1

>prot_H-elongata_contig78957.15558.1 ID=prot_H-elongata_contig78957.15558.1|Name=mRNA_H-elongata_contig78957.15558.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=286bp
MFYPGVFQFSLELARYRVPSWQTPLSVAVLTARAREFLFALEICDTHEIS
KRFRLCGQRNGLKAWGRGPVLYGSVKEWICPSRKSDRKFKNFRKLVEADG
QGGRGRPNGAEGGYIFVGDTGEGDPRAGEMMTERYPERMRAVFLHVVSDT
RKQGRVSVPEDRTVNGVPIVYFRTYVGAAAKAVELGLMDKSGLENVIIAA
KETLVNVPAKSSKWSDMMTDLVRAESVESPLRSLGAETLTLAIDDALAPK
MKLESAVPQLPGLAIATRKVVKVAGPGIKMRPGKA*
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mRNA from alignment at H-elongata_contig78957:104..2231-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig78957.15558.1 ID=mRNA_H-elongata_contig78957.15558.1|Name=mRNA_H-elongata_contig78957.15558.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2128bp|location=Sequence derived from alignment at H-elongata_contig78957:104..2231- (Himanthalia elongata Himel1 dioecious)
ACAATCGAGGGATGTTTTACCCTGGAGTGTTCCAGTTCTCCCTGGAGCTC GCGAGATACCGCGTTCCTTCGTGGCAAACCCCTCTATCCGTGGCGGTGCT GACAGCAAGGGCCAGAGAGTTCCTGTTCGCCCTCGAGATATGCGACACGC ACGAAATTTCGAAGAGATTTCGACTCTGCGGCCAGCGCAACGGACTCAAG GCCTGGGGACGAGGGCCAGTCCTCTACGGCAGCGTGAAGGAGTGGATCTG TCCCAGTCGAAAGAGCGACAGAAAGTTTAAGAATTTTCGAAAGCTCGTGG AGGCGGACGGGCAGGGAGGCCGCGGTCGACCGAACGGGGCCGAGGGCGGG TACATCTTCGTCGGGGACACCGGTGAGGGCGATCCCCGCGCTGGAGAGAT GATGACCGAACGGTACCCCGAGCGAATGCGGGCCGTGTTCCTGCACGTGG TGAGCGACACTCGAAAGCAGGGCCGAGTGAGCGTGCCGGAGGATCGAACG GTTAATGGAGTGCCGATCGTGTATTTTCGGACGTATGTAGGAGCGGCAGC GAAAGCCGTGGAGCTCGGACTGATGGACAAGTCGGGACTGGAGAACGTGA TCATCGCTGCGAAAGAGGTGCGGCGATGACGATGCTGCCTCATGTTCGAT AGTTTTAATCTGGCGGTGGCATGGTGGTCATTGAGGGGAGGGGATGTGAA GCGAAGGCGTAGGGTGCGTGCTTTTAGAGTGGGAGAAGGCGTTTGTGAGA GACAAGGCATTTCCTTCGTCGGATAAATGGTCTAAGAATGTTCTGGCAGT GAGGCCAACGACAGTGGTCAGTCACCTCGGATGATACACCCAAGGCACCC TAGCCCTAACCCTCCACTGACCTTGATTGTGTCTGATTTGAGCCTCGTCT CTTGCCTTGATGTGTTGGACGGTTTGGGTAACTCAGACACTGGTCAACGT GCCGGCCAAGTCTTCTAAGTGGAGCGATATGATGACGGACCTCGTGCGGG CAGAGAGTGTGGAATCTCCTCTGCGGTCGCTCGGGGCGGAGACCCTGACG TTGGCAATAGATGACGCATTGGCGCCCAAGATGAAGCTGGAGAGCGCTGT CCCTCAGCTGCCGGGGCTTGCTATTGCCACGCGAAAGGTTGTAAAGGTTG CAGGGCCGGGGATTAAGATGCGTCCCGGAAAAGCATGATCGCTCTTAAGC ATACTAGCTACTAGCTAGTTTTCGTATAGTTGGAGAAATAACGATTTGAC GAGAAAGCTGTACAAATTGAGGTTGCTGGCGTCATATCGGGGGGAAAAAA GAGGTTGTTGATACTACAAGTACATTGGTGTCATTGCAGTAACAGCGATT TGTAACTTTGTAACTGTCGACATTGACATCAACAGCGGTTTTAGCTGTAC AATTCATGTAACGTACCGTCAACATGATTGACCAGTGGTTTTGCTCCGTT TGGTGTAGATTTTGCTAAGTGCCATATAACCCTCGAAAGTAGTTCTTGAA GAGTAACCCTGGTTAAGTAATTCCGTATGTACTGCGCAGAACTGGTGCGT GTGTAACGCTTCGGGCAGTAGAGCTATAGGGTACAGTACCCGATACGGGT TATTAACGGCTAGGGTTAGGGTGGTGTGGTTGCTGCTTTGTGAAAAGGGT AGGGCTAGGGTCGGGGCACATTATCCCGCGACTAGAGACTATAGGGATTG GTGGAGTGTTGGCGAAATTATCCCACGCCCGTTTTCGTGAGTAAGAGTAC AGTAAGAGTGCTGCCCTTGCCGCCCCTGGATGTGTACAGCAAGAGTATGG GGTTGGTATTAAGGAAGGCGTGTCTAAGGTCGCCGCGGCCACTAAAGAGG GTACTTTAGGCGTACGTCACGTCACGTCATAATTTAGTGTGCGTCTTTGA ATAAATGCAACGCCCATTATTGTAATCGTTTTTGATGGGTAGATGGGTAT GGGTTTTCGATATCCATTTATAGTCTGCCTCGTTCTCGTTCCTTAAATTA GGCCGTTTTGGCTGTTTTGTCCGTTTTTGTTTTCTTCTATGGGACCGCCA AATATTAGCAGGCAGCATTCGCATTCGCCGTAAAACGGTGCACTATTTAA AATTATGAAACAATACAGGCTGGGCCGG
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Coding sequence (CDS) from alignment at H-elongata_contig78957:104..2231-

>mRNA_H-elongata_contig78957.15558.1 ID=mRNA_H-elongata_contig78957.15558.1|Name=mRNA_H-elongata_contig78957.15558.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1716bp|location=Sequence derived from alignment at H-elongata_contig78957:104..2231- (Himanthalia elongata Himel1 dioecious)
ATGTTTTACCCTGGAGTGTTCCAGTTCTCCCTGGAGCTCGCGAGATACCG
CGTTCCTTCGTGGCAAACCCCTCTATCCGTGGCGGTGCTGACAGCAAGGG
CCAGAGAGTTCCTGTTCGCCCTCGAGATATGCGACACGCACGAAATTTCG
AAGAGATTTCGACTCTGCGGCCAGCGCAACGGACTCAAGGCCTGGGGACG
AGGGCCAGTCCTCTACGGCAGCGTGAAGGAGTGGATCTGTCCCAGTCGAA
AGAGCGACAGAAAGTTTAAGAATTTTCGAAAGCTCGTGGAGGCGGACGGG
CAGGGAGGCCGCGGTCGACCGAACGGGGCCGAGGGCGGGTACATCTTCGT
CGGGGACACCGGTGAGGGCGATCCCCGCGCTGGAGAGATGATGACCGAAC
GGTACCCCGAGCGAATGCGGGCCGTGTTCCTGCACGTGGTGAGCGACACT
CGAAAGCAGGGCCGAGTGAGCGTGCCGGAGGATCGAACGGTTAATGGAGT
GCCGATCGTGTATTTTCGGACGTATGTAGGAGCGGCAGCGAAAGCCGTGG
AGCTCGGACTGATGGACAAGTCGGGACTGGAGAACGTGATCATCGCTGCG
AAAGAGATGTTTTACCCTGGAGTGTTCCAGTTCTCCCTGGAGCTCGCGAG
ATACCGCGTTCCTTCGTGGCAAACCCCTCTATCCGTGGCGGTGCTGACAG
CAAGGGCCAGAGAGTTCCTGTTCGCCCTCGAGATATGCGACACGCACGAA
ATTTCGAAGAGATTTCGACTCTGCGGCCAGCGCAACGGACTCAAGGCCTG
GGGACGAGGGCCAGTCCTCTACGGCAGCGTGAAGGAGTGGATCTGTCCCA
GTCGAAAGAGCGACAGAAAGTTTAAGAATTTTCGAAAGCTCGTGGAGGCG
GACGGGCAGGGAGGCCGCGGTCGACCGAACGGGGCCGAGGGCGGGTACAT
CTTCGTCGGGGACACCGGTGAGGGCGATCCCCGCGCTGGAGAGATGATGA
CCGAACGGTACCCCGAGCGAATGCGGGCCGTGTTCCTGCACGTGGTGAGC
GACACTCGAAAGCAGGGCCGAGTGAGCGTGCCGGAGGATCGAACGGTTAA
TGGAGTGCCGATCGTGTATTTTCGGACGTATGTAGGAGCGGCAGCGAAAG
CCGTGGAGCTCGGACTGATGGACAAGTCGGGACTGGAGAACGTGATCATC
GCTGCGAAAGAGACACTGGTCAACGTGCCGGCCAAGTCTTCTAAGTGGAG
CGATATGATGACGGACCTCGTGCGGGCAGAGAGTGTGGAATCTCCTCTGC
GGTCGCTCGGGGCGGAGACCCTGACGTTGGCAATAGATGACGCATTGGCG
CCCAAGATGAAGCTGGAGAGCGCTGTCCCTCAGCTGCCGGGGCTTGCTAT
TGCCACGCGAAAGGTTGTAAAGGTTGCAGGGCCGGGGATTAAGATGCGTC
CCGGAAAAGCATGAACACTGGTCAACGTGCCGGCCAAGTCTTCTAAGTGG
AGCGATATGATGACGGACCTCGTGCGGGCAGAGAGTGTGGAATCTCCTCT
GCGGTCGCTCGGGGCGGAGACCCTGACGTTGGCAATAGATGACGCATTGG
CGCCCAAGATGAAGCTGGAGAGCGCTGTCCCTCAGCTGCCGGGGCTTGCT
ATTGCCACGCGAAAGGTTGTAAAGGTTGCAGGGCCGGGGATTAAGATGCG
TCCCGGAAAAGCATGA
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