prot_H-elongata_contig78920.15556.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig78920.15556.1
Unique Nameprot_H-elongata_contig78920.15556.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length187
Homology
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BLAST of mRNA_H-elongata_contig78920.15556.1 vs. uniprot
Match: A0A6H5K161_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K161_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 4.820e-54
Identity = 112/189 (59.26%), Postives = 136/189 (71.96%), Query Frame = 0 
Query:    1 MVDLLLEAKASTKCATNDTQSTCLHFAAKSHWAEVVRKLVKADPTIQERATTQGDTALMLACLSADETEKTAATLAAMLEPPPAADD--AKRAAQGSDGKMAKEERGVGGSNPKFTLGPDDPRLRAFNRHGHTALHCAAFASCPAAVGMLLEAGADCTAGDKAGRTAFDVATNLAGKR-TPVREIGRGG 186
            M+DLLL+A+ASTK  TNDTQS+CLH AAK++ AE+V +L++ DPTI+E+AT+QGDTALM+ACLSA ETE ++ATL A+L P P +    +  A      K         G  P   LGPDDPRL A NRHGHTALHCAAF+  P AV +LLEAGADCT GDKAGRTA +VA NL  K+ T +RE  RGG
Sbjct:   75 MLDLLLKARASTKMVTNDTQSSCLHIAAKNNAAEIVLRLLEVDPTIEEKATSQGDTALMVACLSAVETEASSATLNALLRPRPTSTTGPSNNATSAPPRKTGSYASAGDGKAPVAVLGPDDPRLVARNRHGHTALHCAAFSQSPTAVRLLLEAGADCTIGDKAGRTAVEVALNLNKKKATGLREGARGG 263
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BLAST of mRNA_H-elongata_contig78920.15556.1 vs. uniprot
Match: D8LLU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU4_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 8.650e-49
Identity = 103/179 (57.54%), Postives = 129/179 (72.07%), Query Frame = 0 
Query:    1 MVDLLLEAKASTKCATNDTQSTCLHFAAKSHWAEVVRKLVKADPTIQERATTQGDTALMLACLSADETEKTAATLAAMLEPPPAADD--AKRAAQGSDGKMAKEERGVGGSNPKFTLGPDDPRLRAFNRHGHTALHCAAFASCPAAVGMLLEAGADCTAGDKAGRTAFDVATNLAGKRT 177
            M+DLLL+A+ASTK  TNDTQS+CLH AAK++  ++V +L++ DPTI+ERAT+QGDTALM+ACLSA ETE ++ATL A+L+P  A     + +A+     K  +      G  P   LGPDDPRL A NRHGHTALHCAAF+  P AV +LLEAGADCT  D+AG TA +VA NL  K T
Sbjct:   48 MLDLLLKARASTKMVTNDTQSSCLHIAAKNNAEDIVLRLLEVDPTIEERATSQGDTALMVACLSAVETEASSATLNALLQPRLATTTGPSNKASGPPPRKTGRYASAGDGKAPVAVLGPDDPRLVARNRHGHTALHCAAFSQSPTAVRLLLEAGADCTIRDEAGLTAVEVALNLIKKAT 226
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78920.15556.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K161_9PHAE4.820e-5459.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLU4_ECTSI8.650e-4957.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 128..157
e-value: 0.071
score: 22.2
coord: 19..48
e-value: 190.0
score: 10.4
coord: 53..87
e-value: 1900.0
score: 2.9
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 128..159
e-value: 9.4E-4
score: 19.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 128..160
score: 10.339
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 1..64
e-value: 1.0E-6
score: 29.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..187
score: 15.353
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 109..180
e-value: 3.2E-11
score: 44.8
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..93
e-value: 9.0E-10
score: 40.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..170
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 2..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig78920contigH-elongata_contig78920:448..2394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig78920.15556.1mRNA_H-elongata_contig78920.15556.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig78920 436..2394 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig78920.15556.1 ID=prot_H-elongata_contig78920.15556.1|Name=mRNA_H-elongata_contig78920.15556.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=187bp
MVDLLLEAKASTKCATNDTQSTCLHFAAKSHWAEVVRKLVKADPTIQERA
TTQGDTALMLACLSADETEKTAATLAAMLEPPPAADDAKRAAQGSDGKMA
KEERGVGGSNPKFTLGPDDPRLRAFNRHGHTALHCAAFASCPAAVGMLLE
AGADCTAGDKAGRTAFDVATNLAGKRTPVREIGRGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf