prot_H-elongata_contig78880.15554.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig78880.15554.1
Unique Nameprot_H-elongata_contig78880.15554.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length145
Homology
BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: D8LHD8_ECTSI (Eukaryotic translation initiation factor 2B beta subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHD8_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 5.000e-73
Identity = 117/142 (82.39%), Postives = 125/142 (88.03%), Query Frame = 0
Query:    1 SVFLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLIISPSHEQ 142
            +VF  +    +VILST AVVANGGLIALNGSH VALAA DLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAV+S+K KD M+NVE     VLNPA+DYIPPNLVDLYITNMGGLQPSY+YRLLAEYYHRDDLIISPS EQ
Sbjct:  336 AVFAMMARVNKVILSTHAVVANGGLIALNGSHAVALAANDLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAVMSFKDKDSMRNVE-----VLNPAYDYIPPNLVDLYITNMGGLQPSYIYRLLAEYYHRDDLIISPSDEQ 472          
BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: A0A836CBW3_9STRA (Eukaryotic translation initiation factor 2B beta subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBW3_9STRA)

HSP 1 Score: 194 bits (493), Expect = 3.890e-58
Identity = 93/141 (65.96%), Postives = 116/141 (82.27%), Query Frame = 0
Query:    1 SVFLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLIISPSHE 141
            +VF  +    +VI+ T AVVANGGL+A  GS+++ALAAK+LSVPVVCVTGL+KLCPLFPHDQDTFNCLL+P+AVL Y+  +  +++E     VLNPA+DYIPP LVDLY+TN+GG QPSY+YRLLAEYYHRDD I++P  E
Sbjct:  261 AVFAIMARVNKVIMPTHAVVANGGLVAGCGSYMIALAAKELSVPVVCVTGLYKLCPLFPHDQDTFNCLLAPSAVLPYEDTELAESIE-----VLNPAYDYIPPELVDLYMTNIGGHQPSYIYRLLAEYYHRDDYILAPEFE 396          
BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: A0A7S3XZZ5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZZ5_HETAK)

HSP 1 Score: 176 bits (445), Expect = 1.030e-52
Identity = 85/137 (62.04%), Postives = 105/137 (76.64%), Query Frame = 0
Query:    1 SVFLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLIIS 137
            +V+  +    +VI+   AV+ANGGLIA  G H VALAAK LSVPV+C+TGLFKLCPL+PH+ D FN LLSP AVL Y++   + +VE     VLNPA+DYIPP L+DLYITNMGG QPSY+YRLLAEYYH +D ++S
Sbjct:  108 AVYALMGRANKVIMPCNAVMANGGLIAAAGGHSVALAAKSLSVPVMCITGLFKLCPLYPHNLDYFNTLLSPGAVLDYEEMATLDDVE-----VLNPAYDYIPPELIDLYITNMGGHQPSYIYRLLAEYYHHEDSVLS 239          
BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: A0A7S2DRQ5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DRQ5_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.530e-47
Identity = 77/133 (57.89%), Postives = 99/133 (74.44%), Query Frame = 0
Query:    1 SVFLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDD 133
            +VF  +    +V+L T AV+ANGGLIA +G H++ALAA++ SVPVVCVTGLFKLCPL+PHD + FN L SPA+VLSY        +    + VLNPA+D++PP L+ LY+TN GG QPSY+YRLLAE+YH  D
Sbjct:    1 AVFAMMQRVDKVVLPTHAVMANGGLIAPSGGHMLALAAQEHSVPVVCVTGLFKLCPLYPHDLNAFNELRSPASVLSYFDTTNRTRLRED-AEVLNPAYDFVPPELIALYVTNNGGYQPSYIYRLLAEFYHPSD 132          
BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: A0A7S2GLW7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GLW7_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.220e-44
Identity = 77/133 (57.89%), Postives = 99/133 (74.44%), Query Frame = 0
Query:    1 SVFLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDD 133
            +VF  +    +V+L T AV+ANGGLIA +G H++ALAA++ SVPVVCVTGLFKLCPL+PHD + FN L SPA+VLSY        +    + VLNPA+D++PP L+ LY+TN GG QPSY+YRLLAE+YH  D
Sbjct:  233 AVFAMMPRVDKVVLPTHAVMANGGLIAPSGGHMLALAAQEHSVPVVCVTGLFKLCPLYPHDLNAFNELRSPASVLSYFDTTNRTRLRED-AEVLNPAYDFVPPELIALYVTNNGGYQPSYIYRLLAEFYHPSD 364          
BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: W7TWQ5_9STRA (Translation initiation factor eif-2b subunit beta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWQ5_9STRA)

HSP 1 Score: 152 bits (383), Expect = 4.460e-42
Identity = 75/133 (56.39%), Postives = 93/133 (69.92%), Query Frame = 0
Query:    1 SVFLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDD 133
            +V+  +    QV+L   A++ANGGLIA  G H+ ALAAK+LSVPVVCVTGLFKL P++ HDQD FN L SP+A++ Y     +   +      LNPA+DY+PP LVDLYITN GG Q  Y+YRLL EYYH DD
Sbjct:  231 AVYAIMARVNQVLLPCRALIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLRSPSALIEYADTQLLPEAD-----FLNPAYDYVPPELVDLYITNTGGHQTFYLYRLLGEYYHHDD 358          
BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: F4PIH5_CAVFA (Translation initiation factor eIF-2B beta subunit n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PIH5_CAVFA)

HSP 1 Score: 149 bits (377), Expect = 2.920e-41
Identity = 72/133 (54.14%), Postives = 98/133 (73.68%), Query Frame = 0
Query:    1 SVFLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDD 133
            S+F  +    +VI+ T AV+ANGGLIA +G+H++A+AAK  SVPV+  TGL+KLCPL+ +DQDT+N   SPAA L +K+ + +++V     H  NP FDYIPP+LV L++TN GG  PSY+YRLL EYYH +D
Sbjct:  219 SIFAMMSRVNKVIIGTHAVMANGGLIAASGTHMLAVAAKYHSVPVMVCTGLYKLCPLYAYDQDTYNDFGSPAAYLKFKEAEFLEDV-----HSYNPNFDYIPPDLVSLFVTNSGGHNPSYIYRLLQEYYHPED 346          
BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: A0A7S2XMS8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMS8_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.660e-40
Identity = 71/134 (52.99%), Postives = 98/134 (73.13%), Query Frame = 0
Query:    3 FLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHD-QDTFNCLLSPAAVLSYKKK--DRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDD 133
            F  +    +V+L   AV+ANGGL+  +G+++VALAAK  S+PVV ++G+FKLCP++PH+ QDT N L+SP++V+ Y +   D M  VE      +NP  DYIPP L++LY+TN+GG QPSY+YRLLAEYYH DD
Sbjct:  122 FAIMARVNKVLLPAHAVLANGGLVGPSGANMVALAAKHNSIPVVIISGMFKLCPMYPHEGQDTLNDLVSPSSVVDYSEMSDDLMSKVE-----FVNPIHDYIPPQLINLYVTNIGGFQPSYLYRLLAEYYHSDD 250          
BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: A0A7S2LE62_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LE62_9STRA)

HSP 1 Score: 149 bits (375), Expect = 4.060e-40
Identity = 75/132 (56.82%), Postives = 99/132 (75.00%), Query Frame = 0
Query:    3 FLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHD-QDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDD 133
            F  +    +V+L   AV+ANGGLIA +GSH+++LAAK  SVPVV +TG+FKLCP+FPH+ QDT N L+SP++V++ +  +  +NVE      +NP  DYIPP LV+LYITN+G  QPSY+YRLLAEYYH DD
Sbjct:  327 FAIMARVNKVLLPAHAVLANGGLIAPSGSHLISLAAKQNSVPVVTITGIFKLCPVFPHEGQDTLNDLISPSSVVNIEDSE-YENVE-----FVNPVHDYIPPQLVELYITNVGCFQPSYIYRLLAEYYHMDD 452          
BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: UPI000644C1FA (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644C1FA)

HSP 1 Score: 143 bits (360), Expect = 8.000e-40
Identity = 68/135 (50.37%), Postives = 97/135 (71.85%), Query Frame = 0
Query:    1 SVFLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLI 135
            ++F  +    +VI+ T AV+ANGGLIA +G+H++A+AAK  SVPV+  TGL+KLCPL+ +DQDT+N   SP A L++K+ + ++ V     H  NP FDYIPP LV L++TN+G   PSY+YRLL EYY+ +D +
Sbjct:  110 AIFAMMSRVNKVIIGTHAVMANGGLIATSGTHMLAVAAKYHSVPVMVCTGLYKLCPLYAYDQDTYNDYGSPNAYLAFKEAEHLEQV-----HSYNPNFDYIPPELVSLFVTNIGAHNPSYIYRLLQEYYYPEDTL 239          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHD8_ECTSI5.000e-7382.39Eukaryotic translation initiation factor 2B beta s... [more]
A0A836CBW3_9STRA3.890e-5865.96Eukaryotic translation initiation factor 2B beta s... [more]
A0A7S3XZZ5_HETAK1.030e-5262.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2DRQ5_9STRA1.530e-4757.89Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2GLW7_9STRA1.220e-4457.89Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7TWQ5_9STRA4.460e-4256.39Translation initiation factor eif-2b subunit beta ... [more]
F4PIH5_CAVFA2.920e-4154.14Translation initiation factor eIF-2B beta subunit ... [more]
A0A7S2XMS8_9STRA1.660e-4052.99Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2LE62_9STRA4.060e-4056.82Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
UPI000644C1FA8.000e-4050.37hypothetical protein n=1 Tax=Acytostelium subglobo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042529Initiation factor 2B-like, C-terminalGENE3D3.40.50.10470coord: 1..129
e-value: 4.4E-40
score: 139.1
IPR000649Initiation factor 2B-relatedPFAMPF01008IF-2Bcoord: 10..118
e-value: 4.9E-23
score: 81.7
NoneNo IPR availablePANTHERPTHR45859FAMILY NOT NAMEDcoord: 2..135
NoneNo IPR availablePANTHERPTHR45859:SF1TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETAcoord: 2..135
IPR037171NagB/RpiA transferase-likeSUPERFAMILY100950NagB/RpiA/CoA transferase-likecoord: 11..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig78880contigH-elongata_contig78880:38..1816 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig78880.15554.1mRNA_H-elongata_contig78880.15554.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig78880 38..1816 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig78880.15554.1 ID=prot_H-elongata_contig78880.15554.1|Name=mRNA_H-elongata_contig78880.15554.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp
SVFLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTG
LFKLCPLFPHDQDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDY
IPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLIISPSHEQRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042529IF_2B-like_C
IPR000649IF-2B-related
IPR037171NagB/RpiA_transferase-like