mRNA_H-elongata_contig78880.15554.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig78880.15554.1
Unique NamemRNA_H-elongata_contig78880.15554.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: D8LHD8_ECTSI (Eukaryotic translation initiation factor 2B beta subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHD8_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 5.000e-73
Identity = 117/142 (82.39%), Postives = 125/142 (88.03%), Query Frame = 1 
Query:    1 SVFLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLIISPSHEQ 426
            +VF  +    +VILST AVVANGGLIALNGSH VALAA DLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAV+S+K KD M+NVE     VLNPA+DYIPPNLVDLYITNMGGLQPSY+YRLLAEYYHRDDLIISPS EQ
Sbjct:  336 AVFAMMARVNKVILSTHAVVANGGLIALNGSHAVALAANDLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAVMSFKDKDSMRNVE-----VLNPAYDYIPPNLVDLYITNMGGLQPSYIYRLLAEYYHRDDLIISPSDEQ 472
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BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: A0A836CBW3_9STRA (Eukaryotic translation initiation factor 2B beta subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBW3_9STRA)

HSP 1 Score: 194 bits (493), Expect = 3.890e-58
Identity = 93/141 (65.96%), Postives = 116/141 (82.27%), Query Frame = 1 
Query:    1 SVFLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLIISPSHE 423
            +VF  +    +VI+ T AVVANGGL+A  GS+++ALAAK+LSVPVVCVTGL+KLCPLFPHDQDTFNCLL+P+AVL Y+  +  +++E     VLNPA+DYIPP LVDLY+TN+GG QPSY+YRLLAEYYHRDD I++P  E
Sbjct:  261 AVFAIMARVNKVIMPTHAVVANGGLVAGCGSYMIALAAKELSVPVVCVTGLYKLCPLFPHDQDTFNCLLAPSAVLPYEDTELAESIE-----VLNPAYDYIPPELVDLYMTNIGGHQPSYIYRLLAEYYHRDDYILAPEFE 396
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BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: A0A7S3XZZ5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZZ5_HETAK)

HSP 1 Score: 176 bits (445), Expect = 1.030e-52
Identity = 85/137 (62.04%), Postives = 105/137 (76.64%), Query Frame = 1 
Query:    1 SVFLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLIIS 411
            +V+  +    +VI+   AV+ANGGLIA  G H VALAAK LSVPV+C+TGLFKLCPL+PH+ D FN LLSP AVL Y++   + +VE     VLNPA+DYIPP L+DLYITNMGG QPSY+YRLLAEYYH +D ++S
Sbjct:  108 AVYALMGRANKVIMPCNAVMANGGLIAAAGGHSVALAAKSLSVPVMCITGLFKLCPLYPHNLDYFNTLLSPGAVLDYEEMATLDDVE-----VLNPAYDYIPPELIDLYITNMGGHQPSYIYRLLAEYYHHEDSVLS 239
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BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: A0A7S2DRQ5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DRQ5_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.530e-47
Identity = 77/133 (57.89%), Postives = 99/133 (74.44%), Query Frame = 1 
Query:    1 SVFLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDD 399
            +VF  +    +V+L T AV+ANGGLIA +G H++ALAA++ SVPVVCVTGLFKLCPL+PHD + FN L SPA+VLSY        +    + VLNPA+D++PP L+ LY+TN GG QPSY+YRLLAE+YH  D
Sbjct:    1 AVFAMMQRVDKVVLPTHAVMANGGLIAPSGGHMLALAAQEHSVPVVCVTGLFKLCPLYPHDLNAFNELRSPASVLSYFDTTNRTRLRED-AEVLNPAYDFVPPELIALYVTNNGGYQPSYIYRLLAEFYHPSD 132
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BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: A0A7S2GLW7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GLW7_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.220e-44
Identity = 77/133 (57.89%), Postives = 99/133 (74.44%), Query Frame = 1 
Query:    1 SVFLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDD 399
            +VF  +    +V+L T AV+ANGGLIA +G H++ALAA++ SVPVVCVTGLFKLCPL+PHD + FN L SPA+VLSY        +    + VLNPA+D++PP L+ LY+TN GG QPSY+YRLLAE+YH  D
Sbjct:  233 AVFAMMPRVDKVVLPTHAVMANGGLIAPSGGHMLALAAQEHSVPVVCVTGLFKLCPLYPHDLNAFNELRSPASVLSYFDTTNRTRLRED-AEVLNPAYDFVPPELIALYVTNNGGYQPSYIYRLLAEFYHPSD 364
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BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: W7TWQ5_9STRA (Translation initiation factor eif-2b subunit beta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWQ5_9STRA)

HSP 1 Score: 152 bits (383), Expect = 4.460e-42
Identity = 75/133 (56.39%), Postives = 93/133 (69.92%), Query Frame = 1 
Query:    1 SVFLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDD 399
            +V+  +    QV+L   A++ANGGLIA  G H+ ALAAK+LSVPVVCVTGLFKL P++ HDQD FN L SP+A++ Y     +   +      LNPA+DY+PP LVDLYITN GG Q  Y+YRLL EYYH DD
Sbjct:  231 AVYAIMARVNQVLLPCRALIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLRSPSALIEYADTQLLPEAD-----FLNPAYDYVPPELVDLYITNTGGHQTFYLYRLLGEYYHHDD 358
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BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: F4PIH5_CAVFA (Translation initiation factor eIF-2B beta subunit n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PIH5_CAVFA)

HSP 1 Score: 149 bits (377), Expect = 2.920e-41
Identity = 72/133 (54.14%), Postives = 98/133 (73.68%), Query Frame = 1 
Query:    1 SVFLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDD 399
            S+F  +    +VI+ T AV+ANGGLIA +G+H++A+AAK  SVPV+  TGL+KLCPL+ +DQDT+N   SPAA L +K+ + +++V     H  NP FDYIPP+LV L++TN GG  PSY+YRLL EYYH +D
Sbjct:  219 SIFAMMSRVNKVIIGTHAVMANGGLIAASGTHMLAVAAKYHSVPVMVCTGLYKLCPLYAYDQDTYNDFGSPAAYLKFKEAEFLEDV-----HSYNPNFDYIPPDLVSLFVTNSGGHNPSYIYRLLQEYYHPED 346
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BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: A0A7S2XMS8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMS8_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.660e-40
Identity = 71/134 (52.99%), Postives = 98/134 (73.13%), Query Frame = 1 
Query:    7 FLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHD-QDTFNCLLSPAAVLSYKKK--DRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDD 399
            F  +    +V+L   AV+ANGGL+  +G+++VALAAK  S+PVV ++G+FKLCP++PH+ QDT N L+SP++V+ Y +   D M  VE      +NP  DYIPP L++LY+TN+GG QPSY+YRLLAEYYH DD
Sbjct:  122 FAIMARVNKVLLPAHAVLANGGLVGPSGANMVALAAKHNSIPVVIISGMFKLCPMYPHEGQDTLNDLVSPSSVVDYSEMSDDLMSKVE-----FVNPIHDYIPPQLINLYVTNIGGFQPSYLYRLLAEYYHSDD 250
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BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: A0A7S2LE62_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LE62_9STRA)

HSP 1 Score: 149 bits (375), Expect = 4.060e-40
Identity = 75/132 (56.82%), Postives = 99/132 (75.00%), Query Frame = 1 
Query:    7 FLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHD-QDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDD 399
            F  +    +V+L   AV+ANGGLIA +GSH+++LAAK  SVPVV +TG+FKLCP+FPH+ QDT N L+SP++V++ +  +  +NVE      +NP  DYIPP LV+LYITN+G  QPSY+YRLLAEYYH DD
Sbjct:  327 FAIMARVNKVLLPAHAVLANGGLIAPSGSHLISLAAKQNSVPVVTITGIFKLCPVFPHEGQDTLNDLISPSSVVNIEDSE-YENVE-----FVNPVHDYIPPQLVELYITNVGCFQPSYIYRLLAEYYHMDD 452
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BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Match: UPI000644C1FA (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644C1FA)

HSP 1 Score: 143 bits (360), Expect = 8.000e-40
Identity = 68/135 (50.37%), Postives = 97/135 (71.85%), Query Frame = 1 
Query:    1 SVFLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTGLFKLCPLFPHDQDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLI 405
            ++F  +    +VI+ T AV+ANGGLIA +G+H++A+AAK  SVPV+  TGL+KLCPL+ +DQDT+N   SP A L++K+ + ++ V     H  NP FDYIPP LV L++TN+G   PSY+YRLL EYY+ +D +
Sbjct:  110 AIFAMMSRVNKVIIGTHAVMANGGLIATSGTHMLAVAAKYHSVPVMVCTGLYKLCPLYAYDQDTYNDYGSPNAYLAFKEAEHLEQV-----HSYNPNFDYIPPELVSLFVTNIGAHNPSYIYRLLQEYYYPEDTL 239
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78880.15554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHD8_ECTSI5.000e-7382.39Eukaryotic translation initiation factor 2B beta s... [more]
A0A836CBW3_9STRA3.890e-5865.96Eukaryotic translation initiation factor 2B beta s... [more]
A0A7S3XZZ5_HETAK1.030e-5262.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2DRQ5_9STRA1.530e-4757.89Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2GLW7_9STRA1.220e-4457.89Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7TWQ5_9STRA4.460e-4256.39Translation initiation factor eif-2b subunit beta ... [more]
F4PIH5_CAVFA2.920e-4154.14Translation initiation factor eIF-2B beta subunit ... [more]
A0A7S2XMS8_9STRA1.660e-4052.99Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2LE62_9STRA4.060e-4056.82Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
UPI000644C1FA8.000e-4050.37hypothetical protein n=1 Tax=Acytostelium subglobo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig78880contigH-elongata_contig78880:38..1816 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score235.3
Seed ortholog evalue1.7e-59
Seed eggNOG ortholog2880.D8LHD8
Preferred nameEIF2B2
KEGG koko:K03372,ko:K03754,ko:K19041
KEGG TC2.A.1.25
KEGG Pathwayko00604,ko01100,ko03013,map00604,map01100,map03013
GOsGO:0000003,GO:0000166,GO:0001541,GO:0001558,GO:0001666,GO:0001882,GO:0001883,GO:0002181,GO:0002183,GO:0002253,GO:0002376,GO:0002429,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005085,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0005851,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0006950,GO:0007154,GO:0007165,GO:0007166,GO:0007272,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007548,GO:0008135,GO:0008144,GO:0008150,GO:0008152,GO:0008361,GO:0008366,GO:0008406,GO:0008585,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009889,GO:0009987,GO:0010001,GO:0010033,GO:0010243,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0010720,GO:0010769,GO:0010770,GO:0010975,GO:0010976,GO:0014003,GO:0016043,GO:0017076,GO:0019001,GO:0019222,GO:0019538,GO:0019899,GO:0021537,GO:0021543,GO:0021761,GO:0021766,GO:0021782,GO:0022008,GO:0022414,GO:0022603,GO:0022604,GO:0023052,GO:0030154,GO:0030234,GO:0030307,GO:0030424,GO:0030516,GO:0030554,GO:0030900,GO:0031323,GO:0031326,GO:0031344,GO:0031346,GO:0032045,GO:0032268,GO:0032501,GO:0032502,GO:0032535,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0032991,GO:0033554,GO:0034248,GO:0034284,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0036293,GO:0036294,GO:0040008,GO:0042063,GO:0042221,GO:0042552,GO:0042995,GO:0043005,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045137,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045773,GO:0045927,GO:0046545,GO:0046660,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048608,GO:0048638,GO:0048639,GO:0048699,GO:0048709,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050770,GO:0050772,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050851,GO:0050852,GO:0050896,GO:0051020,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051239,GO:0051240,GO:0051246,GO:0051716,GO:0051960,GO:0051962,GO:0060255,GO:0060284,GO:0060322,GO:0061387,GO:0061458,GO:0065007,GO:0065008,GO:0065009,GO:0070482,GO:0070887,GO:0071453,GO:0071456,GO:0071704,GO:0071840,GO:0080090,GO:0090066,GO:0097159,GO:0097367,GO:0097458,GO:0098772,GO:0120025,GO:0120035,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901698,GO:1901700,GO:2000026,GO:2000112
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG1184@1,KOG1465@2759
EC2.3.2.27
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03012,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionInitiation factor 2B-related
Ec32 orthologEc-13_000580.1
Exons3
Model size435
Cds size435
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig78880.15554.1prot_H-elongata_contig78880.15554.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig78880 38..1816 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931193.6518352-CDS-H-elongata_contig78880:37..1961622931193.6518352-CDS-H-elongata_contig78880:37..196Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig78880 38..196 +
1691679736.2459931-CDS-H-elongata_contig78880:37..1961691679736.2459931-CDS-H-elongata_contig78880:37..196Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig78880 38..196 +
1622931193.689706-CDS-H-elongata_contig78880:862..9791622931193.689706-CDS-H-elongata_contig78880:862..979Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig78880 863..979 +
1691679736.2664135-CDS-H-elongata_contig78880:862..9791691679736.2664135-CDS-H-elongata_contig78880:862..979Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig78880 863..979 +
1622931193.7077196-CDS-H-elongata_contig78880:1657..18161622931193.7077196-CDS-H-elongata_contig78880:1657..1816Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig78880 1658..1816 +
1691679736.2761106-CDS-H-elongata_contig78880:1657..18161691679736.2761106-CDS-H-elongata_contig78880:1657..1816Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig78880 1658..1816 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig78880.15554.1

>prot_H-elongata_contig78880.15554.1 ID=prot_H-elongata_contig78880.15554.1|Name=mRNA_H-elongata_contig78880.15554.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp
SVFLFLDYNKQVILSTEAVVANGGLIALNGSHVVALAAKDLSVPVVCVTG
LFKLCPLFPHDQDTFNCLLSPAAVLSYKKKDRMKNVEASHSHVLNPAFDY
IPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLIISPSHEQRA*
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mRNA from alignment at H-elongata_contig78880:38..1816+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig78880.15554.1 ID=mRNA_H-elongata_contig78880.15554.1|Name=mRNA_H-elongata_contig78880.15554.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1779bp|location=Sequence derived from alignment at H-elongata_contig78880:38..1816+ (Himanthalia elongata Himel1 dioecious)
TCCGTATTTTTATTTTTGGATTACAATAAGCAGGTAATACTATCGACTGA
GGCGGTAGTCGCCAACGGGGGGCTGATCGCACTGAACGGCAGTCATGTGG
TTGCGTTGGCGGCGAAGGATCTGTCGGTGCCGGTTGTTTGCGTTACTGGA
CTCTTCAAGGTGAACAAAAAACGGGGGGGGGGGTTCTGGTAGTGCGTTTT
GGGGAGGTAAAGGGGGGATATTGGCCAAATGATTTCTCTGAGATGACGAG
AGGCTGAGAGGCCATAGCCGTAAAGCACCGACACACCGATACAATGCTTT
CCCCCGCCACCCACACATACATCCATTGACGAGTCTGATGAGAGGTTTTC
GAAACAAATACTGTATACTGTATATTGTATAATCAACACCCCATTTTGTA
TGGGAGGACCAATGCTAGTAGTCTAGAATTACTATAAATAGCATGACAGG
GCCGGATTGCATGGTTATCTCCAACTTAAAATATATGCATATAAGTGCTC
ATATATATGCTGTACACACGTTTTTCTCTCTTGGTATCACGGATTTCAAC
TTGGCCAAACTACACAAATACAGTATACTAAATACTACTAGTATACGGTA
CACTATATACTATACTATATACTATAAAATGTACCGGTAATATAATGTAG
TATAATGCTACATTATAAATATTTCGTCAAAAGCCATTAATAGCGGAGAA
ATGACACACATGCACAAATAGTGTATTATGTACTGTACCAGGTACGTGAT
TGTAAAAAATACCAGCCCTTCTACCCCCTCCCCCCCCCTGCCTTGCCTCT
TTCTCTCTTTCCCTCGTCGGTGCAGCTGTGCCCGTTGTTTCCCCACGACC
AGGATACGTTCAACTGTCTCCTCTCGCCAGCTGCGGTCCTCTCTTACAAA
AAAAAGGACCGAATGAAGAATGTTGAGGCCAGTCACTCTCACGTCTCCCA
TGTAGCTTGTAGCCTGAACCGGTTCGGTAGAGATCTATCGCGTCATAACC
AGTTGGTGTGATTGCGATTGACAGTGCCGGATTGGTATTTCGGATTGGTA
TTGGTATTTTGATGGGATGATGGGTGTGGTTGCCGATTGCGCTTTATTAG
GACACAATTAATAGGGGAAAGAGGCAGGGCGTCATTCCGTAGGCGACATG
GTCTTTCTCTCTCTCTATGAAGCTGTGTAGAAACTGGGAGGTTTGTGTCC
CCTATCCCCTGTCGAATAAACCGGCGAAATATTTTAGCGAAAAAAAAATC
TCTGTGATTCCCGGTATTTGCCTTACGCGAGTGGGACGGGGAGATTCTCG
TCCCCTGGTGTAATATATACTTTCGTAGGTACAATATTACATCCAAATAG
AGTGCCTACGTTAAACCTAAGTATACTGAACCCATACACGACAGCTGTAT
GGTGAACCCATGATATCCTGCAGTATAGTATATCCTACCCATATAATGCT
ACGATCACATACCGTGACCTTTAATGATTACAGCGTGTCATGTTGCATAG
TTTAGTTTCAACCTACAGATAGTAAAAGCATTAATCGATTTTGCTATCTA
CTTTTCACAACCGGGCTATGAGGTAACTCTACACGTGTTCACTGTTGCCG
CTTTCCCCCTGTCCCATCAGGTTCTAAACCCAGCTTTTGATTACATCCCG
CCGAACCTCGTCGACCTCTACATCACCAACATGGGGGGACTGCAGCCGTC
ATACGTGTACAGGCTTCTGGCGGAGTACTACCACAGGGATGATCTGATCA
TTTCCCCCTCCCATGAACAAAGGGCCTGA
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Coding sequence (CDS) from alignment at H-elongata_contig78880:38..1816+

>mRNA_H-elongata_contig78880.15554.1 ID=mRNA_H-elongata_contig78880.15554.1|Name=mRNA_H-elongata_contig78880.15554.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=870bp|location=Sequence derived from alignment at H-elongata_contig78880:38..1816+ (Himanthalia elongata Himel1 dioecious)
TCCGTATTTTTATTTTTGGATTACAATAAGCAGGTAATACTATCGACTGA
GGCGGTAGTCGCCAACGGGGGGCTGATCGCACTGAACGGCAGTCATGTGG
TTGCGTTGGCGGCGAAGGATCTGTCGGTGCCGGTTGTTTGCGTTACTGGA
CTCTTCAAGTCCGTATTTTTATTTTTGGATTACAATAAGCAGGTAATACT
ATCGACTGAGGCGGTAGTCGCCAACGGGGGGCTGATCGCACTGAACGGCA
GTCATGTGGTTGCGTTGGCGGCGAAGGATCTGTCGGTGCCGGTTGTTTGC
GTTACTGGACTCTTCAAGCTGTGCCCGTTGTTTCCCCACGACCAGGATAC
GTTCAACTGTCTCCTCTCGCCAGCTGCGGTCCTCTCTTACAAAAAAAAGG
ACCGAATGAAGAATGTTGAGGCCAGTCACTCTCACCTGTGCCCGTTGTTT
CCCCACGACCAGGATACGTTCAACTGTCTCCTCTCGCCAGCTGCGGTCCT
CTCTTACAAAAAAAAGGACCGAATGAAGAATGTTGAGGCCAGTCACTCTC
ACGTTCTAAACCCAGCTTTTGATTACATCCCGCCGAACCTCGTCGACCTC
TACATCACCAACATGGGGGGACTGCAGCCGTCATACGTGTACAGGCTTCT
GGCGGAGTACTACCACAGGGATGATCTGATCATTTCCCCCTCCCATGAAC
AAAGGGCCTGAGTTCTAAACCCAGCTTTTGATTACATCCCGCCGAACCTC
GTCGACCTCTACATCACCAACATGGGGGGACTGCAGCCGTCATACGTGTA
CAGGCTTCTGGCGGAGTACTACCACAGGGATGATCTGATCATTTCCCCCT
CCCATGAACAAAGGGCCTGA
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