prot_H-elongata_contig78829.15551.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig78829.15551.1
Unique Nameprot_H-elongata_contig78829.15551.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length220
Homology
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5L5J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J5_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 1.370e-34
Identity = 85/218 (38.99%), Postives = 113/218 (51.83%), Query Frame = 0
Query:    3 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGI-DPKC---WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 215
            D FVYLG  IS+ G+   EI  R+  AW CF + S ++YD P      K+R L+ EV+E +LYGC +W+L+   + KL   HR  L RC+    S R   D   LSY + L++  CE  IE  V KR L +AG V RM D RLP   +   M GG   RG+       R+ E    F + D K    W  +A++   WY +VE GA  FM  W  + A
Sbjct:  119 DRFVYLGRAISADGKADREITSRSCRAWKCFRRNSASMYDRPRANRPLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIG--WSKRKRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMKDSRLPKRMLLGAMAGGVGYRGRQESDWVSRLGEDLVAFNMRDEKQGGKWRESAKDPQVWYNKVEYGASWFMRKWHRQEA 333          
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5L5T8_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5T8_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 4.030e-34
Identity = 82/218 (37.61%), Postives = 114/218 (52.29%), Query Frame = 0
Query:    3 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGIDPKC----WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 215
            D FVYLG TIS+ G+   EI  R+  AW C+ + S ++YD        K+R L+ EV+E +LYGC +W+L+   + KL   HR  L RC+    S R   D   LSY + L++  CE  IE  V KR L +AG V RM D+RLP   +   M GG   RG       +R+ E    FG+  +     W  +A++   WY ++E GA  FM  W  + A
Sbjct:  169 DRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIG--WSKRKRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKWHRQEA 383          
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5JCS2_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS2_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 5.320e-33
Identity = 81/218 (37.16%), Postives = 111/218 (50.92%), Query Frame = 0
Query:    3 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGIDPKC----WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 215
            D FVYLG  IS+ G+   EI  R+  AW C+ + S ++YD        K+R L+ EV+E +LYGC +W+L+   + KL   HR  L RC+    S R   D   LSY + L++  CE  IE  V KR L +AG V RM D RLP   +   M GG   RG        R+ EY   F +  +     W  +A+++  WY +VE  A  FM  W  + A
Sbjct:   68 DRFVYLGRIISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIG--WSKRKRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQGSDWVSRLGEYLVAFNMGDEKEGGKWKESAKDSEVWYNKVEDVAAWFMRKWHRQEA 282          
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5L020_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L020_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 5.570e-33
Identity = 86/218 (39.45%), Postives = 111/218 (50.92%), Query Frame = 0
Query:    3 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGI-DPKC---WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 215
            D FVYLG TIS+ G+V  EI  RT  AW C+ + S ++YD        K+R L+ EV+E +LYGC +W+L+   + KL   HR  L RC+    S R   D   LSY + L++  CE  IE  V KR L + G V RM D RLP   +   M GG   RG        R+ E    F I D K    W  +A++   WY  VE GA  FM  W  + A
Sbjct:  556 DRFVYLGRTISADGKVDREITSRTCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIG--WSKRKRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFVGFVVRMEDSRLPKRMLSGAMAGGVGYRGGQESDWVSRLGEDLVAFNIGDEKGAGKWKESAKDPEVWYNNVEDGAAWFMRKWHRQEA 770          
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5JZD4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZD4_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 8.300e-33
Identity = 83/218 (38.07%), Postives = 112/218 (51.38%), Query Frame = 0
Query:    3 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGIDPKC----WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 215
            D FVYLG TIS+ G+   EI  R+  AW C+ + S ++YD        K+R L+ EV+E +LYGC +W+L+   + KL E HR  L RC+    S R   D   LSY + L++  CE  IE  V KR L +AG V RM D+RLP   +   M GG   RG        R+ E    F +  +     W   A++   WY +VE GA  FM  W  + A
Sbjct:  413 DRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTTEHYAKLNETHRQFLTRCIG--WSKRKRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGAKWKECAKDPEVWYNKVEDGAAWFMRKWHRQEA 627          
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5KU62_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU62_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 1.630e-32
Identity = 81/218 (37.16%), Postives = 111/218 (50.92%), Query Frame = 0
Query:    3 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGIDPKC----WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 215
            D FVYLG TIS+ G+   EI  R+  AW C+ + S ++YD        K+R L+ EV+E +LYGC +W+L+   + KL   HR  L RC+    S R   D   LSY + L++  CE  IE  V +R L + G V RM D RLP   +   M GG   RG        R+ E    F +  +     W  +A+N+  WY +VE GA  FM  W  + A
Sbjct:  215 DRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRANRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIG--WSKRKRSD-RPLSYAQALIQAGCEETIEATVRQRRLCFGGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKNSEVWYNKVEDGAAWFMRKWHRQEA 429          
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5JTX2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX2_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 1.630e-32
Identity = 82/218 (37.61%), Postives = 111/218 (50.92%), Query Frame = 0
Query:    3 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGIDPKC----WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 215
            D FVYLG TIS+ G+   EI  R+  AW C+ +    +YD        K+R L+ +V+E +LYGC +W+L+   + KL   HR  L RC++   S R   D   LSY E L++  CE  IE  V KR L +AG V RM D RLP   +   M GG   RG        R+ E    F +  +     W  +A+N+  WY +VE GA  FM  W  + A
Sbjct:  200 DRFVYLGRTISADGKADLEITSRSCRAWKCYRRNRALMYDRRRANRQLKIRLLQVQVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCID--WSKRKRSD-RPLSYAEALIQAGCEQTIEATVRKRRLCFAGFVMRMEDSRLPKRILIGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKNSEVWYNKVEDGAAWFMRKWHRQEA 414          
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5JGD8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGD8_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 3.550e-32
Identity = 81/218 (37.16%), Postives = 113/218 (51.83%), Query Frame = 0
Query:    3 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGIDPKC----WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 215
            D FVYLG TIS+ G+   EI  R+  AW C+ + S ++YD        K+R L+ +V++ +LYGC +W+L+   + KL   HR  L RC+    S R   D   LSY + L++  CE  IE  V KR L +AG V RM D+RLP   +   M GG   RG        R+ E    F +  +     W  +A+N+  WY +VE GA  FM  W  + A
Sbjct:  518 DRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRANRQLKIRLLQAKVVDTLLYGCASWSLTAKHYTKLNGTHRQFLTRCIG--WSKRKRSD-RPLSYAQALIQAGCEETIEATVRKRSLCFAGFVMRMEDNRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKNSEVWYNKVEDGAAWFMRKWHRQEA 732          
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5K065_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K065_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 6.740e-32
Identity = 81/218 (37.16%), Postives = 113/218 (51.83%), Query Frame = 0
Query:    3 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGIDPKC----WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 215
            D FVYLG TIS+ G+   EI  R+  AW C+ + S ++YD        K+R L+ EV+E +LYGC +W+L+   + KL   HR  L RC+    S R   D   LSY + L++  CE  IE  V KR L +AG V RM D+RLP   +   M GG   RG        R+ E    F +  +     W  +A++   WY +VE GA +F+  W  + A
Sbjct:  581 DRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTVEHYTKLNGTHRQFLTRCIG--WSKRQRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGDKWKESAKDPEVWYNKVEDGAALFVRKWHRQEA 795          
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5KG97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG97_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 1.550e-31
Identity = 79/218 (36.24%), Postives = 108/218 (49.54%), Query Frame = 0
Query:    3 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGIDPKC----WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 215
            D FVYLG TIS+ G+   EI  R+  AW C+ + S ++YD        K+R L+ EV+E +LYGC +W+L+   + KL   HR  L RC+    S R   D   LSY +VL++  CE  IE    KR L + G V RM D RLP   +   M GG   RG        R+ E    F +  +     W  + ++   WY +VE GA   M  W  + A
Sbjct:   85 DRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRANRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIG--WSKRKRSD-RPLSYAQVLIQAGCEETIEATARKRRLCFVGFVMRMEDSRLPKRMLSGAMAGGAGYRGGQESDWVSRLGEDLVAFNMGAEKEGGKWKESVKDPEVWYSKVENGAAWLMRKWHRQEA 299          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5J5_9PHAE1.370e-3438.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5T8_9PHAE4.030e-3437.61Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCS2_9PHAE5.320e-3337.16Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L020_9PHAE5.570e-3339.45Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JZD4_9PHAE8.300e-3338.07Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KU62_9PHAE1.630e-3237.16Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JTX2_9PHAE1.630e-3237.61Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JGD8_9PHAE3.550e-3237.16Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K065_9PHAE6.740e-3237.16Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KG97_9PHAE1.550e-3136.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47027FAMILY NOT NAMEDcoord: 1..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig78829contigH-elongata_contig78829:1590..2249 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig78829.15551.1mRNA_H-elongata_contig78829.15551.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig78829 1590..2249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig78829.15551.1 ID=prot_H-elongata_contig78829.15551.1|Name=mRNA_H-elongata_contig78829.15551.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=220bp
NIDTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVAD
KVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRA
APDYHMLSYLEVLLRTDCECIEVAVMKRILRYAGRVARMHDDRLPNIAMR
SEMFGGKRKRGQPVKRLEHRVTEYCTVFGIDPKCWMWAAQNAHDWYRQVE
TGAEVFMSAWSTKRANETNA
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