prot_H-elongata_contig78668.15537.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig78668.15537.1
Unique Nameprot_H-elongata_contig78668.15537.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
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BLAST of mRNA_H-elongata_contig78668.15537.1 vs. uniprot
Match: D7G535_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G535_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 2.430e-42
Identity = 70/84 (83.33%), Postives = 78/84 (92.86%), Query Frame = 0 
Query:    1 MTGIICHEIAGPAAFLSWLIAGLGCLLSALSFAELSWRIPSAGGAYAYTFVALGELPASIVGWCMTLEYGVSGAAVAKSWGEMV 84
            M+G+ICHEIAGPA   SW+IAG GCLLS +SFAELSWR+PSAGGAYAYTFVALGELPA+IVGWCMTLEYG+S AAVAKSWGEM+
Sbjct:   85 MSGLICHEIAGPAGMFSWMIAGFGCLLSGMSFAELSWRVPSAGGAYAYTFVALGELPAAIVGWCMTLEYGISAAAVAKSWGEML 168
[Close]
BLAST of mRNA_H-elongata_contig78668.15537.1 vs. uniprot
Match: A0A7R9UE61_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE61_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.110e-31
Identity = 53/85 (62.35%), Postives = 71/85 (83.53%), Query Frame = 0 
Query:    1 MTGIICHEIAGPAAFLSWLIAGLGCLLSALSFAELSWRIPSAGGAYAYTFVALGELPASIVGWCMTLEYGVSGAAVAKSWGEMVI 85
            + G+I HE AGPA  LSWL AG GC+LS +++AE+S R+PSAG +YAYT+VALGELPA + GWC+TLEYG+S +A+A+SWG+ +I
Sbjct:   73 LCGLIAHEYAGPAVVLSWLTAGFGCVLSGMNYAEMSSRVPSAGSSYAYTYVALGELPAVVAGWCLTLEYGISASAIARSWGDKMI 157
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BLAST of mRNA_H-elongata_contig78668.15537.1 vs. uniprot
Match: A0A835ZA89_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA89_9STRA)

HSP 1 Score: 118 bits (296), Expect = 3.630e-29
Identity = 51/82 (62.20%), Postives = 68/82 (82.93%), Query Frame = 0 
Query:    1 MTGIICHEIAGPAAFLSWLIAGLGCLLSALSFAELSWRIPSAGGAYAYTFVALGELPASIVGWCMTLEYGVSGAAVAKSWGE 82
            M G+I  E+AGPA   SWL+AGLGCLLS ++FAE+S  +PSAG AYAY +VALGELPA ++ WC++LEYG+S AA+A++WG+
Sbjct:   80 MCGLIGGEVAGPAGVFSWLVAGLGCLLSGVAFAEMSSLVPSAGSAYAYAYVALGELPAVVIAWCLSLEYGISSAAIARNWGD 161
[Close]
BLAST of mRNA_H-elongata_contig78668.15537.1 vs. uniprot
Match: D8LQA2_ECTSI (Cationic amino acid transporter-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQA2_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 1.470e-27
Identity = 50/85 (58.82%), Postives = 67/85 (78.82%), Query Frame = 0 
Query:    1 MTGIICHEIAGPAAFLSWLIAGLGCLLSALSFAELSWRIPSAGGAYAYTFVALGELPASIVGWCMTLEYGVSGAAVAKSWGEMVI 85
            + G+I    AGPAA +SW++AG+GC+ S LS+AELS  IPS GG YAY FVALGELPA +  WC+TLE+G+SGAAVA++W + ++
Sbjct:   71 IVGLIGSTYAGPAAVVSWVLAGIGCVFSGLSYAELSSIIPSEGGTYAYAFVALGELPAIVTAWCLTLEFGISGAAVARAWADKIV 155
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BLAST of mRNA_H-elongata_contig78668.15537.1 vs. uniprot
Match: A0A7S2Q307_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q307_9STRA)

HSP 1 Score: 107 bits (268), Expect = 8.140e-27
Identity = 49/85 (57.65%), Postives = 66/85 (77.65%), Query Frame = 0 
Query:    1 MTGIICHEIAGPAAFLSWLIAGLGCLLSALSFAELSWRIPSAGGAYAYTFVALGELPASIVGWCMTLEYGVSGAAVAKSWGEMVI 85
            + G+I H  AGPA F+SW+++G+  LLS   +AELS RIPSAG +YAY FVALGELPA I  + +TLE+ +SG+AVA+SWG+ V+
Sbjct:  111 LNGLIAHSYAGPATFISWIVSGIAALLSGCCYAELSGRIPSAGSSYAYAFVALGELPAFITAFMLTLEFLLSGSAVARSWGDKVV 195
[Close]
BLAST of mRNA_H-elongata_contig78668.15537.1 vs. uniprot
Match: A0A2P4XYY0_9STRA (Amino Acid-Polyamine-Organocation (APC) Family (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XYY0_9STRA)

HSP 1 Score: 104 bits (260), Expect = 3.240e-26
Identity = 49/83 (59.04%), Postives = 62/83 (74.70%), Query Frame = 0 
Query:    2 TGIICHEIAGPAAFLSWLIAGLGCLLSALSFAELSWRIPSAGGAYAYTFVALGELPASIVGWCMTLEYGVSGAAVAKSWGEMV 84
            TG I    AGPAAF+SW+IAG+ C ++AL++ EL  R+PS+G  YAY+F ALGELPA I  W +TLEYGVSG+ VA+SW   V
Sbjct:   55 TGEIISGTAGPAAFISWIIAGVVCCINALAYMELVTRVPSSGSTYAYSFYALGELPAVIAAWLLTLEYGVSGSGVARSWASKV 137
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BLAST of mRNA_H-elongata_contig78668.15537.1 vs. uniprot
Match: A0A484DZC6_BRELC (AA_permease_C domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZC6_BRELC)

HSP 1 Score: 107 bits (266), Expect = 3.980e-25
Identity = 53/81 (65.43%), Postives = 61/81 (75.31%), Query Frame = 0 
Query:    2 TGIICHEIAGPAAFLSWLIAGLGCLLSALSFAELSWRIPSAGGAYAYTFVALGELPASIVGWCMTLEYGVSGAAVAKSWGE 82
            +G+I    AGPAA LSWL+AG GCLLS LSF ELS  IPSAG +YAY + ALGELPA I G+ +TLEYGVS A  A+SW E
Sbjct:   57 SGLIASSYAGPAATLSWLLAGAGCLLSGLSFMELSCLIPSAGSSYAYAYHALGELPALIAGFLLTLEYGVSSAGAARSWSE 137
[Close]
BLAST of mRNA_H-elongata_contig78668.15537.1 vs. uniprot
Match: B8BQ56_THAPS (Amino acid transporter (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQ56_THAPS)

HSP 1 Score: 106 bits (264), Expect = 4.600e-25
Identity = 49/85 (57.65%), Postives = 65/85 (76.47%), Query Frame = 0 
Query:    1 MTGIICHEIAGPAAFLSWLIAGLGCLLSALSFAELSWRIPSAGGAYAYTFVALGELPASIVGWCMTLEYGVSGAAVAKSWGEMVI 85
            + G+I H  AGPA F+SW+I+G   LLS   +AELS RIPSAG +YAY +VALGELPA +V   +TLE+ +SG+AVA+SWG+ V+
Sbjct:   22 LNGLIAHSYAGPATFISWIISGFAALLSGCCYAELSGRIPSAGSSYAYAYVALGELPAFVVAGMLTLEFLLSGSAVARSWGDKVV 106
[Close]
BLAST of mRNA_H-elongata_contig78668.15537.1 vs. uniprot
Match: A0A7S2LCT3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LCT3_9STRA)

HSP 1 Score: 100 bits (248), Expect = 7.120e-25
Identity = 46/85 (54.12%), Postives = 63/85 (74.12%), Query Frame = 0 
Query:    1 MTGIICHEIAGPAAFLSWLIAGLGCLLSALSFAELSWRIPSAGGAYAYTFVALGELPASIVGWCMTLEYGVSGAAVAKSWGEMVI 85
            + G+I    AGPA  LSWLIAG+  +LS   +AEL+ RIP++G +YAY ++++GELPA I   C+TLEY VS AAVA+SWG+ V+
Sbjct:   10 LCGLIARNYAGPATCLSWLIAGIASILSGACYAELAGRIPASGSSYAYAYISMGELPAVIAAACLTLEYLVSSAAVARSWGDKVV 94
[Close]
BLAST of mRNA_H-elongata_contig78668.15537.1 vs. uniprot
Match: A0A662X6M4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X6M4_9STRA)

HSP 1 Score: 103 bits (256), Expect = 7.130e-25
Identity = 48/83 (57.83%), Postives = 62/83 (74.70%), Query Frame = 0 
Query:    2 TGIICHEIAGPAAFLSWLIAGLGCLLSALSFAELSWRIPSAGGAYAYTFVALGELPASIVGWCMTLEYGVSGAAVAKSWGEMV 84
            TG I    AGPAAF+SW+IAG+ C ++AL++ EL  R+PS+G  YAY+F ALGELPA +  W +TLEYGVSG+ VA+SW   V
Sbjct:   55 TGDIISGTAGPAAFVSWVIAGVVCCINALAYMELVTRVPSSGSTYAYSFYALGELPAVVAAWLLTLEYGVSGSGVARSWATKV 137
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78668.15537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G535_ECTSI2.430e-4283.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7R9UE61_9STRA1.110e-3162.35Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A835ZA89_9STRA3.630e-2962.20Amino acid permease-domain-containing protein n=1 ... [more]
D8LQA2_ECTSI1.470e-2758.82Cationic amino acid transporter-like protein n=2 T... [more]
A0A7S2Q307_9STRA8.140e-2757.65Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A2P4XYY0_9STRA3.240e-2659.04Amino Acid-Polyamine-Organocation (APC) Family (Fr... [more]
A0A484DZC6_BRELC3.980e-2565.43AA_permease_C domain-containing protein n=1 Tax=Br... [more]
B8BQ56_THAPS4.600e-2557.65Amino acid transporter (Fragment) n=1 Tax=Thalassi... [more]
A0A7S2LCT3_9STRA7.120e-2554.12Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A662X6M4_9STRA7.130e-2557.83Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002293Amino acid/polyamine transporter IPFAMPF13520AA_permease_2coord: 9..76
e-value: 2.0E-8
score: 33.5
NoneNo IPR availableGENE3D1.20.1740.10coord: 1..85
e-value: 1.3E-22
score: 82.1
NoneNo IPR availablePANTHERPTHR43243:SF4CATIONIC AMINO ACID TRANSPORTER 4coord: 1..83
NoneNo IPR availablePANTHERPTHR43243FAMILY NOT NAMEDcoord: 1..83
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..85
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig78668contigH-elongata_contig78668:1747..2394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig78668.15537.1mRNA_H-elongata_contig78668.15537.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig78668 1732..2394 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig78668.15537.1 ID=prot_H-elongata_contig78668.15537.1|Name=mRNA_H-elongata_contig78668.15537.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
MTGIICHEIAGPAAFLSWLIAGLGCLLSALSFAELSWRIPSAGGAYAYTF
VALGELPASIVGWCMTLEYGVSGAAVAKSWGEMVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002293AA/rel_permease1