mRNA_H-elongata_contig786.15533.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: D7G583_ECTSI (Acetylornithine transaminase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G583_ECTSI) HSP 1 Score: 248 bits (632), Expect = 6.270e-73 Identity = 138/237 (58.23%), Postives = 153/237 (64.56%), Query Frame = 2
Query: 2 TGIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLACAAANCADS------GALLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQALAKVT 694
TG+GRTGK+WGY+N VEPDV+T AK ALGGGVPIGAMLC +R D F+PGNHASTFGGNPLACAAANC S GALL NVR+RGEQLRAGL L+ KYPET+AG+RGWGLINGLVL ++SPVLAG VVAETT LGLLLVPAGLKVVRFVPPL+AT AEVSTAL++ DQALA VT
Sbjct: 299 TGMGRTGKVWGYQNFDVEPDVVTCAK------------------------------------------------------------ALGGGVPIGAMLCKERADVFEPGNHASTFGGNPLACAAANCVTSKLSENGGALLENVRERGEQLRAGLAELQEKYPETVAGVRGWGLINGLVLNEESPVLAGAVVAETTKLGLLLVPAGLKVVRFVPPLVATAAEVSTALSVIDQALAIVT 475
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: A0A835ZAE5_9STRA (Acetylornithine transaminase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE5_9STRA) HSP 1 Score: 197 bits (501), Expect = 9.350e-54 Identity = 116/232 (50.00%), Postives = 135/232 (58.19%), Query Frame = 2
Query: 2 TGIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLACAA----ANCADSGALLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQALA 685
TG+GRTG IWG+ENLGVEPD ++AK ALG GVPIGAM+C + D FKPG+HASTFGGNPLACAA AN SG LLTNV+ RGEQLRAGL+RL KYP+ + RGWGLINGLV++D+ +LAG VVA T GLLLVPAGLKVVR+VPPL +EAE+ ALA D A+A
Sbjct: 297 TGMGRTGTIWGFENLGVEPDTFSSAK------------------------------------------------------------ALGAGVPIGAMMCKAKCDVFKPGDHASTFGGNPLACAAGLVIANRISSGGLLTNVKARGEQLRAGLDRLLAKYPDHLKSKRGWGLINGLVIKDEVELLAGQVVAAATDGGLLLVPAGLKVVRYVPPLTVSEAEIDDALAKTDVAIA 468
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: A0A0M1JZR9_9CYAN (Acetylornithine aminotransferase n=2 Tax=unclassified Planktothricoides TaxID=2621081 RepID=A0A0M1JZR9_9CYAN) HSP 1 Score: 185 bits (469), Expect = 1.160e-49 Identity = 102/233 (43.78%), Postives = 131/233 (56.22%), Query Frame = 2
Query: 5 GIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLACAAA----NCADSGALLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQALAKV 691
G+GR+GK+WGYENLG+EPD+ T+AK LGGG+PIGA+LC D FKPG+HASTFGGNP ACA A + +S LL NV+DRG+QLR GL+ + KYP + +RGWGLINGL L+ DSP+ + D+V + GLLLVPAG KVVRFVPPLI + AE+ AL +F+ A+A++
Sbjct: 252 GMGRSGKLWGYENLGIEPDIFTSAK------------------------------------------------------------GLGGGIPIGALLCKSHCDVFKPGDHASTFGGNPFACAVALAVCHTLESENLLANVQDRGQQLRQGLQAIAAKYPTLVEEVRGWGLINGLELKADSPIASTDLVKAAISQGLLLVPAGPKVVRFVPPLIVSAAEIDRALQLFESAIAQL 424
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: UPI0020205C7A (aspartate aminotransferase family protein n=1 Tax=Chroococcidiopsis sp. CCMEE 29 TaxID=155894 RepID=UPI0020205C7A) HSP 1 Score: 184 bits (467), Expect = 2.350e-49 Identity = 102/233 (43.78%), Postives = 127/233 (54.51%), Query Frame = 2
Query: 5 GIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLACAAANCA----DSGALLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQALAKV 691
G+GR+GK WGYENLG+EPD+ T+AK LGGG+PIGA++C D F+PG+HASTFGGNP ACAAA C + +L NV++RGEQLR GL + KYP +A +RGWGLING+ L DS + D+V A GLLLVPAG KV+RFVPPL+ TEAEV AL ++A+AKV
Sbjct: 253 GVGRSGKFWGYENLGIEPDIFTSAK------------------------------------------------------------GLGGGIPIGAVMCKKFCDVFQPGDHASTFGGNPFACAAALCVCETIERDNILQNVQERGEQLRTGLSAIAAKYPNAVAEVRGWGLINGMELNPDSQTTSSDIVKAAIAEGLLLVPAGPKVIRFVPPLVVTEAEVDQALQAVERAMAKV 425
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: A0A2T1EC45_9CHRO (Acetylornithine aminotransferase n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A2T1EC45_9CHRO) HSP 1 Score: 184 bits (466), Expect = 3.130e-49 Identity = 104/230 (45.22%), Postives = 128/230 (55.65%), Query Frame = 2
Query: 5 GIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLACAAANCA----DSGALLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQAL 682
G+GRTGK+WGYENLG+EPDV T+AK LGGG+PIGA+LC D F PG+HASTFGGNP ACAAA C + +LL NV +RGEQLR GL+ L KY +A +RGWGLING+ L + P+ +GDVV + GLLLVPAG KV+RFVPPLI +E+EV+TAL +QA+
Sbjct: 252 GVGRTGKLWGYENLGIEPDVFTSAK------------------------------------------------------------GLGGGIPIGAVLCKSFCDVFTPGDHASTFGGNPFACAAALCVLETIEGDSLLQNVIERGEQLRTGLQALAAKYSNIVAEVRGWGLINGMELAQNIPLTSGDVVKAAMSEGLLLVPAGPKVIRFVPPLIVSESEVNTALQAVEQAM 421
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: A0A1C0V3M6_9CYAN (Acetylornithine aminotransferase n=4 Tax=Limnothrix TaxID=132605 RepID=A0A1C0V3M6_9CYAN) HSP 1 Score: 183 bits (464), Expect = 5.560e-49 Identity = 106/231 (45.89%), Postives = 132/231 (57.14%), Query Frame = 2
Query: 5 GIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLAC--AAANCADSGA--LLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQALA 685
G+GRTG++WGYENLG+EPD+ T+AK LGGG+PIGA+LC + + F+PG+HAST+GGNP AC A A C GA L NVRDRGEQLRAGL+ L ++YP IA +RGWGLINGLVL++D+ + + D+V A GLLLVPAG +VVRFVPPLI T AE+ ALA QA+A
Sbjct: 246 GVGRTGQLWGYENLGIEPDIFTSAK------------------------------------------------------------GLGGGIPIGALLCKAKCNVFEPGDHASTYGGNPFACGVAMAVCQTVGAPGFLDNVRDRGEQLRAGLKALAVQYPNLIAEVRGWGLINGLVLKEDAGLSSIDLVKTAMAAGLLLVPAGPQVVRFVPPLIVTAAEIDEALAAITQAIA 416
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: UPI0016870BB9 (aspartate aminotransferase family protein n=1 Tax=Microcoleus sp. FACHB-1515 TaxID=2692821 RepID=UPI0016870BB9) HSP 1 Score: 181 bits (459), Expect = 2.080e-48 Identity = 105/233 (45.06%), Postives = 126/233 (54.08%), Query Frame = 2
Query: 5 GIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLACAAA----NCADSGALLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQALAKV 691
G+GRTG +WGYE LG+EPD+ T+AK LGGG+PIGAMLC D F PG+HASTFGGNP ACA A + LL NV+ RGEQLR GLE + KYP I+ +RGWGLINGLVL ++ V + +V A GLLLVPAGLKVVRFVPPLI TEAE+ ALA+ D+ LA++
Sbjct: 234 GMGRTGHLWGYEALGIEPDIFTSAK------------------------------------------------------------GLGGGIPIGAMLCKSSCDVFAPGDHASTFGGNPFACAVALAVCQTLEQNRLLQNVQARGEQLRQGLEAIAPKYPNLISQVRGWGLINGLVLNAENEVNSAAIVKAAMAEGLLLVPAGLKVVRFVPPLIVTEAEIDRALAVIDRVLAEL 406
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: A0A139X6P8_9CYAN (Acetylornithine aminotransferase n=5 Tax=Nostocales TaxID=1161 RepID=A0A139X6P8_9CYAN) HSP 1 Score: 180 bits (456), Expect = 7.740e-48 Identity = 105/235 (44.68%), Postives = 124/235 (52.77%), Query Frame = 2
Query: 5 GIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLACAAA----NCADSGALLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQALAKVTR 697
G+GRTG+ WGYE LGVEPD+ T+AK LGGG+PIGAM+C D F+PG HASTFGGNP AC A + ++ NVR+RGEQLRAGL + KYP I +RGWGLI+G+ L D A DVV T GLLLVPAG KVVRFVPPLI TEAE++TAL D+A+A VTR
Sbjct: 246 GMGRTGEFWGYEYLGVEPDIFTSAK------------------------------------------------------------GLGGGIPIGAMMCKSSCDVFQPGEHASTFGGNPFACGVALAVCQTLEQENIVQNVRERGEQLRAGLRAIAAKYPNQIIDVRGWGLIDGMELSADISTTAADVVKATIDEGLLLVPAGPKVVRFVPPLIVTEAEINTALQAVDKAMATVTR 420
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: UPI0019F2992D (Aspartate aminotransferase family protein n=1 Tax=Synechococcales cyanobacterium M55_K2018_004 TaxID=2774347 RepID=UPI0019F2992D) HSP 1 Score: 179 bits (455), Expect = 1.010e-47 Identity = 106/231 (45.89%), Postives = 123/231 (53.25%), Query Frame = 2
Query: 5 GIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLACAAA----NCADSGALLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQALA 685
G+GRTGK+WGYENLG+EPD+ T+AK LGGG+PIGAMLC D FKPG+HASTFGGNP AC A D LL N R RGEQLR GL + KYP IA +RGWGLINGLVL ++ + A +VV A GLLLVPAG KVVRFVPPLI T EV A+A+ ++ALA
Sbjct: 247 GMGRTGKLWGYENLGIEPDIFTSAK------------------------------------------------------------GLGGGIPIGAMLCKSFCDVFKPGDHASTFGGNPFACGVALTVCQTLDREHLLENARARGEQLRQGLRAITQKYPNLIAEVRGWGLINGLVLREEVELTAPEVVKRAIAEGLLLVPAGPKVVRFVPPLIVTADEVEAAIAMVERALA 417
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: UPI001CA6965D (aspartate aminotransferase family protein n=1 Tax=Leptothermofonsia sichuanensis TaxID=2917832 RepID=UPI001CA6965D) HSP 1 Score: 179 bits (453), Expect = 1.030e-47 Identity = 103/229 (44.98%), Postives = 124/229 (54.15%), Query Frame = 2
Query: 5 GIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLACAAA----NCADSGALLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQA 679
G+GR+G +WGYENLG+EPD+ T+AK LGGG+PIGAMLC D F+PG HASTFGGNP ACA A + LLTNV++RGEQLRAGL + K+P+ IA +RGWGLINGL L+ DSP+ + DVV A GLLLVPAG KVVRFVPPLI + AE+ AL + A
Sbjct: 220 GMGRSGHLWGYENLGIEPDIFTSAK------------------------------------------------------------GLGGGIPIGAMLCKSHCDIFQPGEHASTFGGNPFACAVALSVCQTIERDQLLTNVQERGEQLRAGLRAIVEKHPDAIAEVRGWGLINGLELKADSPLTSADVVKAAIAQGLLLVPAGPKVVRFVPPLIVSAAEIEQALKAVEMA 388 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig786.15533.1 >prot_H-elongata_contig786.15533.1 ID=prot_H-elongata_contig786.15533.1|Name=mRNA_H-elongata_contig786.15533.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp MLCNDRGDCFKPGNHASTFGGNPLACAAANCADSGALLTNVRDRGEQLRAback to top mRNA from alignment at H-elongata_contig786:10545..13270+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig786.15533.1 ID=mRNA_H-elongata_contig786.15533.1|Name=mRNA_H-elongata_contig786.15533.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2726bp|location=Sequence derived from alignment at H-elongata_contig786:10545..13270+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig786:10545..13270+ >mRNA_H-elongata_contig786.15533.1 ID=mRNA_H-elongata_contig786.15533.1|Name=mRNA_H-elongata_contig786.15533.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=834bp|location=Sequence derived from alignment at H-elongata_contig786:10545..13270+ (Himanthalia elongata Himel1 dioecious)back to top |