prot_H-elongata_contig7852.15523.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7852.15523.1
Unique Nameprot_H-elongata_contig7852.15523.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length117
Homology
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BLAST of mRNA_H-elongata_contig7852.15523.1 vs. uniprot
Match: D8LRL6_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL6_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 2.230e-36
Identity = 79/126 (62.70%), Postives = 88/126 (69.84%), Query Frame = 0 
Query:    3 ALEKCDSEIETASLRERLASLGKKESLVCKFASCGLTGPLRNMLFSSKPESICDVLVKDIVEQSGRGLISEVMKGGQGSQQNQTTGAKRSR-------------GEVDGIGPASSMPPGFVADKQH 115
            ALEKCDS+IE ASL++RL SL KKESLVCKFASCGLTGPLRNMLFSSKPESICDVL+KDIVEQSGR + +    GG G  Q    G KR R             G  DG+    SMPPG+ +DKQH
Sbjct:  101 ALEKCDSDIERASLKDRLESLIKKESLVCKFASCGLTGPLRNMLFSSKPESICDVLIKDIVEQSGRPIGA----GGAGQDQANVAGLKRRRXXXXXXXXXXXMVGHADGM----SMPPGYGSDKQH 218
[Close]
BLAST of mRNA_H-elongata_contig7852.15523.1 vs. uniprot
Match: A0A6H5J9E8_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E8_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 4.860e-36
Identity = 81/122 (66.39%), Postives = 88/122 (72.13%), Query Frame = 0 
Query:    3 ALEKCDSEIETASLRERLASLGKKESLVCKFASCGLTGPLRNMLFSSKPESICDVLVKDIVEQSGRGLISEVMKGGQGSQQNQTTGAKRSR--GEVDGIG-------PASSMPPGFVADKQH 115
            ALEKCDSEIE ASL++RL SL KKESLVCKFASCGLTGPLRNMLFSSKPESICDVLVKDIVEQSGR + +    GG G  Q    G KR R  GE  G+G          SMPPG+ +DK H
Sbjct:   68 ALEKCDSEIERASLKDRLESLIKKESLVCKFASCGLTGPLRNMLFSSKPESICDVLVKDIVEQSGRPIGA----GGAGQDQANVAGLKRRREQGEEVGVGMGMVGHADGMSMPPGYGSDKHH 185
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7852.15523.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRL6_ECTSI2.230e-3662.70Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A6H5J9E8_9PHAE4.860e-3666.39RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7852contigH-elongata_contig7852:2001..2826 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7852.15523.1mRNA_H-elongata_contig7852.15523.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7852 2001..2826 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7852.15523.1 ID=prot_H-elongata_contig7852.15523.1|Name=mRNA_H-elongata_contig7852.15523.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bp
EKALEKCDSEIETASLRERLASLGKKESLVCKFASCGLTGPLRNMLFSSK
PESICDVLVKDIVEQSGRGLISEVMKGGQGSQQNQTTGAKRSRGEVDGIG
PASSMPPGFVADKQHW*
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