prot_H-elongata_contig78501.15520.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig78501.15520.1
Unique Nameprot_H-elongata_contig78501.15520.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length151
Homology
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: D8LIH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIH2_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 2.230e-67
Identity = 113/126 (89.68%), Postives = 119/126 (94.44%), Query Frame = 0
Query:    6 LLIDLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIAPLSLLRSFG-IQDDVTCLAWAPDSRHLVAGT 130
            LLIDLVNHSSSVLPFESRKEIRLL PS DGRLLLVLDVDGRALLVNL RRVVLHR NFKKKIRAISFSP+DRFIAAGVGKK++VWRTPGRRHQIAPLSLLR +G +QDDVTCLAW PDSRHLVAG+
Sbjct:   39 LLIDLVNHSSSVLPFESRKEIRLLTPSRDGRLLLVLDVDGRALLVNLQRRVVLHRFNFKKKIRAISFSPDDRFIAAGVGKKVEVWRTPGRRHQIAPLSLLRGYGGLQDDVTCLAWGPDSRHLVAGS 164          
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: A0A6H5LCN5_9PHAE (Utp12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCN5_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 9.020e-67
Identity = 114/128 (89.06%), Postives = 121/128 (94.53%), Query Frame = 0
Query:    4 SQLLIDLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIAPLSLLRSFG-IQDDVTCLAWAPDSRHLVAGT 130
            +QLLIDLVNHSSSVLPFESRKEIRLL PS DGRLLLVLDVDGRALLVNL RRVVLHR NFKKKIRAISFSP+DRFIAAGVGKK++VWRTPGRRHQIAPLSLLR +G +QDDVTCLAW PDSRHLVAG+
Sbjct:   28 TQLLIDLVNHSSSVLPFESRKEIRLLTPSRDGRLLLVLDVDGRALLVNLQRRVVLHRFNFKKKIRAISFSPDDRFIAAGVGKKVEVWRTPGRRHQIAPLSLLRGYGGLQDDVTCLAWGPDSRHLVAGS 155          
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: A0A836CGV6_9STRA (Periodic tryptophan protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGV6_9STRA)

HSP 1 Score: 171 bits (432), Expect = 2.070e-46
Identity = 79/134 (58.96%), Postives = 111/134 (82.84%), Query Frame = 0
Query:    2 LGSQLL-IDLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIAPLSLLRSFG-IQDDVTCLAWAPDSRHLVAGTASM 133
            +G+++L +DLVNH++S +PFE+RK+I LLA SHDGR+L+V+DV+GRALL+NL RRVVLHRLN K ++RA++FSP+DR++A  VG+ ++VW TPGRRHQ APL L +++G   DDVTC++WAPD  +L+ G   M
Sbjct:   34 VGNRVLWVDLVNHATSAMPFEARKDIELLAASHDGRILVVVDVEGRALLINLQRRVVLHRLNLKSRVRAVAFSPDDRYMAFAVGRTVEVWCTPGRRHQFAPLVLYKTYGGSTDDVTCISWAPDGCNLLVGGKDM 167          
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: A0A7S2WEL1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WEL1_9STRA)

HSP 1 Score: 143 bits (361), Expect = 8.060e-37
Identity = 68/135 (50.37%), Postives = 100/135 (74.07%), Query Frame = 0
Query:    1 PLGSQLLI-DLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPG---RRHQIAPLSLLRSF-GIQDDVTCLAWAPDSRHLVAGT 130
            P+G+++ + DLVNH S  LPFE+RK I  +A  +D +LL+V+DVDGR LLVN + R V+HR NFK K+RA++FSP+D++IA   G+ +QVWRTPG    + + +PL+LLR++ G  DDV  ++W+PD R+ V G+
Sbjct:   35 PVGNRVTVFDLVNHRSRTLPFETRKNIHRIALGNDAKLLVVVDVDGRGLLVNFNARTVMHRFNFKSKVRALAFSPDDKYIAVSTGRHVQVWRTPGGTKMQKEFSPLALLRTYTGHDDDVLTISWSPDGRYFVTGS 169          
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: A0A8K1CJB2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJB2_PYTOL)

HSP 1 Score: 137 bits (344), Expect = 1.560e-34
Identity = 66/135 (48.89%), Postives = 92/135 (68.15%), Query Frame = 0
Query:    1 PLGSQLL-IDLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIAPLSLLRSFGIQ-DDVTCLAWAPDSRHLVAGTASM 133
            P+G+++   DL+NH+S+   FE RK +  LA SHD RLL+ +D DGR LL+NL +RVVL+R NFKK +RA+SFSP+DR++A   G K+QVW TPG R + AP  L R++G    D+  L W+ DS+  V G   +
Sbjct:   32 PVGNRITQFDLINHTSTTFSFEGRKNVEQLAVSHDSRLLVAVDSDGRCLLINLRKRVVLYRFNFKKAVRALSFSPDDRYLAVTHGNKVQVWHTPGLRREFAPFVLHRTYGGHYADILTLTWSHDSKFFVTGAEDL 166          
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: A0A2T9ZCN5_9FUNG (Utp12 domain-containing protein n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9ZCN5_9FUNG)

HSP 1 Score: 133 bits (334), Expect = 3.430e-33
Identity = 65/132 (49.24%), Postives = 92/132 (69.70%), Query Frame = 0
Query:    1 PLGSQLLI-DLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIAPLSLLRSF-GIQDDVTCLAWAPDSRHLVAGT 130
            P+G+Q+ I DLVN+ S  +PFE+RK I  +A S + +LLL +D DGRALLVN +RR+V+H  NFK K+    FSP+ +FIA GVGK++++WR+PG +H+ AP  L R + G  DD+T + W  DSR  V  +
Sbjct:   32 PVGNQVSIFDLVNNKSETMPFENRKNIVYIALSPNSQLLLTIDEDGRALLVNFYRRIVIHHFNFKGKVNCAEFSPDGKFIAVGVGKRIEIWRSPGLQHEFAPFILHRKYSGHYDDLTHINWFHDSRFFVTSS 163          
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: A0A2P4WX08_9STRA (Periodic tryptophan protein 2 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WX08_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.980e-32
Identity = 61/135 (45.19%), Postives = 92/135 (68.15%), Query Frame = 0
Query:    1 PLGSQLL-IDLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIAPLSLLRSF-GIQDDVTCLAWAPDSRHLVAGTASM 133
            P+G+++   DLVN++S    FE+RK +  +A SHD RLLL +D +GR LLVNL R  VL+R +FK+ +RA++FSP+DR+IA  +G K+Q+WRTPG   + AP  L R++ G   DV  ++W+ D++  V G   +
Sbjct:   32 PVGNRITQFDLVNNTSRTFAFEARKNVERVAVSHDSRLLLAVDEEGRCLLVNLKRGAVLYRFHFKQPVRALNFSPDDRYIAVAIGNKVQLWRTPGLVREFAPFVLHRTYTGHYADVVSVSWSHDAKFFVTGAEDL 166          
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: A0A2D4BGV4_PYTIN (Periodic tryptophan protein 2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGV4_PYTIN)

HSP 1 Score: 130 bits (328), Expect = 2.210e-32
Identity = 66/135 (48.89%), Postives = 92/135 (68.15%), Query Frame = 0
Query:    1 PLGSQLL-IDLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIAPLSLLRSFGIQ-DDVTCLAWAPDSRHLVAGTASM 133
            P+G+++   DL+NH+S    FESR+ +  LA SHD RLL+ +DV+GR LLV+L + VVL R NFKK +RA++FS +DRF+A   G KLQ+WRTP  R   AP  L R++G    D+T +AW+ DSR  V G+  +
Sbjct:   32 PVGNRITQFDLINHTSRTFAFESRQNVARLAVSHDSRLLVAVDVEGRCLLVHLRKGVVLARFNFKKPVRALAFSRDDRFLAVSHGNKLQLWRTPAVRRDFAPFVLHRTYGGHYADITSVAWSHDSRFFVTGSXDL 166          
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: A0A5D6XQT4_9STRA (Utp12 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQT4_9STRA)

HSP 1 Score: 130 bits (326), Expect = 4.150e-32
Identity = 64/135 (47.41%), Postives = 92/135 (68.15%), Query Frame = 0
Query:    1 PLGSQLL-IDLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIAPLSLLRSFGIQ-DDVTCLAWAPDSRHLVAGTASM 133
            P+G+++   DLVNHSS    FESRK +  LA SHD RLL+ +D DGR +LV+L + VVL+R +FKK +RA++FSP+D+F+A   G K+Q+W TP  R + AP +L R++G    DV  +AW+ D+R  V G   +
Sbjct:   32 PVGNRITQFDLVNHSSKTFAFESRKNVARLAVSHDARLLVAVDEDGRCMLVHLRKGVVLYRFHFKKPVRALAFSPDDKFLAVTHGNKVQLWHTPALRREFAPFALHRTYGGHYADVVSVAWSHDARFFVTGAEDL 166          
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: A0A662WSJ9_9STRA (Utp12 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WSJ9_9STRA)

HSP 1 Score: 130 bits (326), Expect = 4.170e-32
Identity = 63/125 (50.40%), Postives = 87/125 (69.60%), Query Frame = 0
Query:   10 LVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIAPLSLLRSF-GIQDDVTCLAWAPDSRHLVAGTASM 133
            L++H+S    FE+RK +  +A SHD RLLL +D DGR LLVNL R  VL+R +FK+++RA+SFSP+DR+IA  VG K+Q+WRTPG R + AP  L RS+ G   DV  ++W+ DS+  V G   +
Sbjct:   66 LLSHTSRTFAFEARKNVERVAVSHDSRLLLAVDEDGRCLLVNLRRGAVLYRFHFKQRVRALSFSPDDRYIAVAVGNKVQLWRTPGLRREFAPFVLHRSYSGHYADVLSVSWSHDSKFFVTGAEDL 190          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIH2_ECTSI2.230e-6789.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LCN5_9PHAE9.020e-6789.06Utp12 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CGV6_9STRA2.070e-4658.96Periodic tryptophan protein 2 n=1 Tax=Tribonema mi... [more]
A0A7S2WEL1_9STRA8.060e-3750.37Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A8K1CJB2_PYTOL1.560e-3448.89Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2T9ZCN5_9FUNG3.430e-3349.24Utp12 domain-containing protein n=1 Tax=Smittium m... [more]
A0A2P4WX08_9STRA1.980e-3245.19Periodic tryptophan protein 2 n=1 Tax=Phytophthora... [more]
A0A2D4BGV4_PYTIN2.210e-3248.89Periodic tryptophan protein 2 n=1 Tax=Pythium insi... [more]
A0A5D6XQT4_9STRA4.150e-3247.41Utp12 domain-containing protein n=1 Tax=Pythium br... [more]
A0A662WSJ9_9STRA4.170e-3250.40Utp12 domain-containing protein n=2 Tax=Nothophyto... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 101..137
e-value: 13.0
score: 10.1
coord: 13..51
e-value: 180.0
score: 2.7
coord: 54..91
e-value: 0.49
score: 19.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 65..90
e-value: 0.13
score: 13.2
coord: 104..130
e-value: 0.024
score: 15.5
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 5..142
e-value: 5.5E-16
score: 60.3
IPR027145Periodic tryptophan protein 2PANTHERPTHR19858WD40 REPEAT PROTEINcoord: 8..133
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 18..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig78501contigH-elongata_contig78501:1572..2499 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig78501.15520.1mRNA_H-elongata_contig78501.15520.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig78501 1572..2499 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig78501.15520.1 ID=prot_H-elongata_contig78501.15520.1|Name=mRNA_H-elongata_contig78501.15520.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=151bp
PLGSQLLIDLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLV
NLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIA
PLSLLRSFGIQDDVTCLAWAPDSRHLVAGTASMMHFQEKWNEMERDGDWI
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR027145PWP2
IPR036322WD40_repeat_dom_sf