mRNA_H-elongata_contig78434.15511.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig78434.15511.1 vs. uniprot
Match: A0A8B7EA18_HYDVU (zinc finger BED domain-containing protein DAYSLEEPER-like n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7EA18_HYDVU) HSP 1 Score: 83.6 bits (205), Expect = 1.840e-18 Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 1 EAELLRYDQVPTLDPGSSGKRVLEWWIDHRHELPLLHRVACVYLAVPATSASSERVFSTAGNVVTKKRNRLSPESVQRLAFLH 249
E EL Y +P P SS +++WW H +PLL +VA YLA+P TSASSERVFS AG+VVT R +L+P++V ++ +LH
Sbjct: 16 EIELDTYKGLPR--PDSSNTDIIKWWEAHAKRIPLLFQVARKYLAIPLTSASSERVFSAAGSVVTDSRLKLNPQNVGKIVYLH 96
BLAST of mRNA_H-elongata_contig78434.15511.1 vs. uniprot
Match: UPI001471CDEF (zinc finger BED domain-containing protein 1-like n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI001471CDEF) HSP 1 Score: 86.3 bits (212), Expect = 6.610e-18 Identity = 42/83 (50.60%), Postives = 54/83 (65.06%), Query Frame = 1
Query: 1 EAELLRYDQVPTLDPGSSGKRVLEWWIDHRHELPLLHRVACVYLAVPATSASSERVFSTAGNVVTKKRNRLSPESVQRLAFLH 249
E E+ RY Q + G L WW +H+ E PLL R+A YL +P TS SSERVFSTAG++VT +R+ L+PE V +L FLH
Sbjct: 320 EEEITRYKQTAPM--SLVGGNPLSWWKEHQTEYPLLSRLAKTYLCIPGTSVSSERVFSTAGDIVTAQRSALNPEHVDQLLFLH 400
BLAST of mRNA_H-elongata_contig78434.15511.1 vs. uniprot
Match: A0A2S2P4C5_SCHGA (Zinc finger BED domain-containing protein 1 (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2P4C5_SCHGA) HSP 1 Score: 79.0 bits (193), Expect = 3.530e-17 Identity = 42/79 (53.16%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 13 LRYDQVPTLDPGSSGKRVLEWWIDHRHELPLLHRVACVYLAVPATSASSERVFSTAGNVVTKKRNRLSPESVQRLAFLH 249
LRYD DP EWW H + PL+ +VA +L++PATS SSER FSTAGNVVT KRN L+PE+V L FL+
Sbjct: 31 LRYD----FDP-------FEWWKSHEKKYPLVAKVAKKFLSIPATSVSSERCFSTAGNVVTPKRNCLAPENVNMLVFLY 98
BLAST of mRNA_H-elongata_contig78434.15511.1 vs. uniprot
Match: UPI0014461CE7 (zinc finger BED domain-containing protein DAYSLEEPER-like n=1 Tax=Epinephelus lanceolatus TaxID=310571 RepID=UPI0014461CE7) HSP 1 Score: 80.1 bits (196), Expect = 5.500e-17 Identity = 42/81 (51.85%), Postives = 53/81 (65.43%), Query Frame = 1
Query: 4 AELLRYDQVPTLDPGSSGKRVLEWWIDHRHELPLLHRVACVYLAVPATSASSERVFSTAGNVVTKKRNRLSPESVQRLAFL 246
+EL Y Q LD S + L+WW +H+ P L ++A YL++PATSA SERVFST GN+VT R+ L PESV RL FL
Sbjct: 84 SELQSYLQCADLD---SEENPLDWWREHQRVYPRLSKLAKKYLSIPATSAPSERVFSTGGNIVTCLRSSLKPESVDRLVFL 161
BLAST of mRNA_H-elongata_contig78434.15511.1 vs. uniprot
Match: A0A0A1WDS8_ZEUCU (Transposable element Hobo transposase n=1 Tax=Zeugodacus cucurbitae TaxID=28588 RepID=A0A0A1WDS8_ZEUCU) HSP 1 Score: 79.0 bits (193), Expect = 1.150e-16 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 64 VLEWWIDHRHELPLLHRVACVYLAVPATSASSERVFSTAGNVVTKKRNRLSPESVQRLAFLHGCH 258
VL+WW + + PLL +VA +L +PA+SA +ERVFS AGNV+T+KRNRL P SV L FLH +
Sbjct: 81 VLKWWGVNENRYPLLSKVALKFLTIPASSAPAERVFSLAGNVITEKRNRLGPTSVDNLLFLHSYY 145
BLAST of mRNA_H-elongata_contig78434.15511.1 vs. uniprot
Match: UPI001113C14C (zinc finger BED domain-containing protein 1-like n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=UPI001113C14C) HSP 1 Score: 77.8 bits (190), Expect = 1.410e-16 Identity = 41/79 (51.90%), Postives = 49/79 (62.03%), Query Frame = 1
Query: 13 LRYDQVPTLDPGSSGKRVLEWWIDHRHELPLLHRVACVYLAVPATSASSERVFSTAGNVVTKKRNRLSPESVQRLAFLH 249
LRYD DP EWW H + PL+ + YL++PATS SSER FSTAGNVVT KRN L+PE+V L FL+
Sbjct: 48 LRYD----FDP-------FEWWKSHEKKYPLIAELVKKYLSIPATSVSSERCFSTAGNVVTSKRNCLAPENVNMLVFLY 115
BLAST of mRNA_H-elongata_contig78434.15511.1 vs. uniprot
Match: UPI002013D797 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI002013D797) HSP 1 Score: 82.8 bits (203), Expect = 1.570e-16 Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 1 EAELLRYDQVPTLDPGSSGKRVLEWWIDHRHELPLLHRVACVYLAVPATSASSERVFSTAGNVVTKKRNRLSPESVQRLAFLH 249
E E+ RY + P L L WW +H++E PL+ R+A VYL +P TS SSERVFSTAG++VT +R+ LS + V +L FL+
Sbjct: 578 EEEMSRYKEAPPLSLAEGSP--LSWWKEHQNEYPLMSRLAKVYLCIPGTSVSSERVFSTAGDIVTAQRSVLSSKHVDQLLFLN 658
BLAST of mRNA_H-elongata_contig78434.15511.1 vs. uniprot
Match: A0A1A7XRV2_9TELE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Iconisemion striatum TaxID=60296 RepID=A0A1A7XRV2_9TELE) HSP 1 Score: 78.6 bits (192), Expect = 3.370e-16 Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 1 EAELLRYDQVPTLDPGSSGKRVLEWWIDHRHELPLLHRVACVYLAVPATSASSERVFSTAGNVVTKKRNRLSPESVQRLAFLH 249
E E+ RY +P + L WW + E PLL R+A YL VP TS +SERVFSTAG++VT KR+ LSP+ V L FLH
Sbjct: 98 EDEIQRYRVE---NPAGLNENPLTWWRSNEREYPLLARLAKQYLCVPGTSIASERVFSTAGDIVTAKRSCLSPDHVNELLFLH 177
BLAST of mRNA_H-elongata_contig78434.15511.1 vs. uniprot
Match: A0A8C1JAT0_CYPCA (BED-type domain-containing protein n=6 Tax=Osteoglossocephalai TaxID=1489341 RepID=A0A8C1JAT0_CYPCA) HSP 1 Score: 80.5 bits (197), Expect = 1.020e-15 Identity = 39/83 (46.99%), Postives = 54/83 (65.06%), Query Frame = 1
Query: 1 EAELLRYDQVPTLDPGSSGKRVLEWWIDHRHELPLLHRVACVYLAVPATSASSERVFSTAGNVVTKKRNRLSPESVQRLAFLH 249
E E+ RY + P L L WW +H++E PL+ R+A VYL +P TS SSERVFS AG++VT +R+ LS + V +L FL+
Sbjct: 535 EEEMSRYKEAPPLSLAEGSP--LSWWKEHQNEYPLMSRLAKVYLCIPGTSVSSERVFSKAGDIVTAQRSVLSSKHVDQLLFLN 615
BLAST of mRNA_H-elongata_contig78434.15511.1 vs. uniprot
Match: A0A1A8JIY1_NOTKU (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Nothobranchius kuhntae TaxID=321403 RepID=A0A1A8JIY1_NOTKU) HSP 1 Score: 75.9 bits (185), Expect = 1.520e-15 Identity = 41/83 (49.40%), Postives = 53/83 (63.86%), Query Frame = 1
Query: 1 EAELLRYDQVPTLDPGSSGKRVLEWWIDHRHELPLLHRVACVYLAVPATSASSERVFSTAGNVVTKKRNRLSPESVQRLAFLH 249
E E+ Y + P+L P S L WW H+ PLL R++ YL +P TS S+ERVFSTAG+VVT KR+ L P+ V +L FLH
Sbjct: 56 EEEMDNYLKTPSL-PLSEDP--LNWWRVHKVAFPLLARLSERYLCIPGTSGSAERVFSTAGDVVTAKRSTLKPQHVDQLVFLH 135 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78434.15511.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig78434.15511.1 >prot_H-elongata_contig78434.15511.1 ID=prot_H-elongata_contig78434.15511.1|Name=mRNA_H-elongata_contig78434.15511.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp EAELLRYDQVPTLDPGSSGKRVLEWWIDHRHELPLLHRVACVYLAVPATSback to top mRNA from alignment at H-elongata_contig78434:2671..2940- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig78434.15511.1 ID=mRNA_H-elongata_contig78434.15511.1|Name=mRNA_H-elongata_contig78434.15511.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=270bp|location=Sequence derived from alignment at H-elongata_contig78434:2671..2940- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig78434:2671..2940- >mRNA_H-elongata_contig78434.15511.1 ID=mRNA_H-elongata_contig78434.15511.1|Name=mRNA_H-elongata_contig78434.15511.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=540bp|location=Sequence derived from alignment at H-elongata_contig78434:2671..2940- (Himanthalia elongata Himel1 dioecious)back to top |